Siniperca chuatsi (mandarin fish): 122867721
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Entry
122867721 CDS
T08948
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122867721 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122867721 (lrrc4bb)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
NGL family
122867721 (lrrc4bb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_9
V-set
Ig_2
LRRNT
Ig_6
DUF7617
Big_6
Motif
Other DBs
NCBI-GeneID:
122867721
NCBI-ProteinID:
XP_044034811
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Position
LG20:complement(14168364..14176981)
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AA seq
744 aa
AA seq
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MRVVMVTSPCTPSPLLWLVQLLLWFHNHGPQLTEAAPPCPTLCTCSNQASRVICTRKSLD
QVPDNISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFIGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGIKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVETVRGDEENSARQYINETFIDFPTV
QRGVLEGRPGITISPSLSSLSSLSPRANRATENAVTVSIMDVTNIPGLDDVMKTTKIIIG
CFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTMNS
GSGGEGTLRIHHPEIVNLPNIGRTDTLNHYYKTHHFNNNVMGLSIGTEGMGPGGILNNKN
QQCQDIPISCTSVPISSSNLLSTSGNGTNINPNSMSPPLPMSLPMPTMGLHGSIKGFMGQ
NQNPQMEPLLFKGSSKENVQETQI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgtaccccttcccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggacctcagctgacagaggcagcacccccctgcccc
accctctgtacctgctccaatcaggcgagccgcgtcatctgtacaaggaagagtttagat
caagtcccagacaatatttcagagaacacaagatacctcaatctacaagagaacacaatt
caggtgatcaagtctgacacctttaagcacctgcggcatttggaaatcctccagctctcc
aagaaccacattcggcaaattgaggtgggagctttcattggccttcccaacctcaacaca
ctggagctttttgacaaccgtctcacagtggtgccatcacaagcctttgagtacctcagc
aagctaagggaactatggctacgaaacaaccccatcgagacactgccggcatttgccttt
caccgtgttccctctttacgccgtctcgatctaggggaactcaggaagctggatttcatc
tcagaggctgcctttgaaggtctggtcaacttgcgcttcttgaatcttggcatgtgcggc
ttgaaggacatccctaacctcaccccactagtacgactagaggagttggagctgtcaggg
aaccagctggggatagtcaggcctggatccttccagggcctagtgtcacttcgcaagctg
tggctgatgcactccagagtgtcagtcattgaacgcaatgcttttgatgacctcaaaaac
ttggaggagctcaacctctcccacaattctctgcattctctgccccatgacctcttcacc
cctttgcaccagttggagagggtacatctcaaccacaacccttgggtgtgcaactgtgat
gttctgtggctcagctggtggctgaaagaaacggttcccagcaacaccacatgttgtgct
cgctgccatgcgcccccaggtataaagggaaagtacattggggaactagaccagagccac
tttacctgctatgccccagtaattgttgagccaccaactgacctcaatgtcactgagggc
atggctgctgagctgaaatgtcgtactggaacctcaatgacctctgtgaattggttcact
cctaatggcactctgatgacccatggatcatatcgagttaggatctcagtgcttcacgac
ggaacgctgaacttcacaaatgtgaccgtgcaagacactgggcagtacacttgcatggta
accaactctgctggaaacaccactgcaaccgctgtgctcaatgtgtctgcttcagacccc
agcaacagctacagctatttcaccactgtcactgtggaaacagtagagacagtaagagga
gatgaggagaactcagcaagacagtatattaacgagaccttcatagattttcctactgtt
caaagaggggtgttagagggccgacctggcatcactatatctccttctctctcctctctt
tcctcactgtccccacgagccaacagagctactgaaaatgcagtgactgtgtccataatg
gatgtaactaacattccaggcctggatgatgtaatgaaaacaactaagatcatcattggt
tgcttcgtggccattacctttatggcagctgtaatgttggtggtcttctataaactacgg
aagcagcaccagctacacaagcaccacggccctgccagagccattgaaattgtcaatgta
gaagatgagatcggagctggggccgggagtggcatctcaggtggttcaacaatgaattct
ggcagtggtggagaaggaaccctaaggatacatcatccagaaatagtcaaccttcccaac
attggccgcacagatactctcaaccattactacaagacccatcatttcaacaacaacgtg
atgggtcttagtattggcaccgaagggatgggaccaggagggatcctcaataacaagaac
cagcaatgccaggatattcccatctcctgtacctcagtcccaatctcttcatctaatttg
ctctccacatcaggcaatggcaccaacatcaaccccaactctatgtccccaccgctgccg
atgtctctccccatgcctaccatgggcttacatggatcgatcaaaggttttatgggccaa
aaccagaatccccaaatggagcctcttctcttcaaggggagctcaaaggaaaacgtccaa
gagactcagatctaa
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