Siniperca chuatsi (mandarin fish): 122867762
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Entry
122867762 CDS
T08948
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122867762 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122867762 (usp42)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122867762 (usp42)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122867762 (usp42)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122867762 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
122867762
NCBI-ProteinID:
XP_044034881
LinkDB
All DBs
Position
LG20:complement(16275824..16288490)
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AA seq
1204 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSPFTSGDVGMDGSCSSSWAVGPTMPSDSPRLKAPGGCLGP
TPGAAVYNSTPSSVDRPKEQVISSDDGIDLPQKVLFPPERLNLKWTQVHRVGAGLQNMGN
TCFLNSALQCLTYTPPFANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRNSNVLTLSLKRFANFSGGKITKDVKYPEYLDLRPFMSQSQGDPQVYGLYAV
LVHSGFSCHAGHYFCYIKGSNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSSDVKKAG
DYSHMSHNPGIPGQSSPRPVVIPRINTTVHHNNIGFIGPQLPPHMTKSTLHVNGNGSLRD
YPTNSKPSTSSSVVGKPSHGLASSSSSISHSISRPTMIPDHDKRQKLSFFIGQGRQNRPS
SSSSSYSQPSSASSSSSSSSLSSSQSTSDVHSDIRFVPRQLNRVNGTSCSNGDHHTGGNG
ASFLVPYGQESSEESDQENCGTLDNGRLAKSHLNGNNRTGEGFDNSPKPTNGESGMHRNG
NGLNGPTHGTSKSSQNGHHYGHHKVNGHNTPDKISGSNHGSSSSVATVAANGLVSDHGQS
KEAHTSASSHASSSQSIHPAASESQHLSTPDTRAKTVSEPLPQHTASSAVSSPPSATATK
THSVTSRESASSSPAALSTLPDCSQSTNGASAAPQKVSRSGDETIDLPQTSGPSAATEGR
TDAKEQHQTKPSSRSNEGQSSRDRERDRLYSDSSRDRERHYRDRSQERESDGDRHRYRRD
YHDYRHHRSYRDRLPPHDRNYRDWESERHWERTHHPRGRDRDRCSHHYHYYHHHRSRENS
DRGRRGHCYPYREESHSRSRWQDESRESRVVKDKSNGRERDYYSSKEENSSPAIVPETST
KSKGSPPRARLSTFESAPNREDQNHKRTADPLSKERDDSSEARRSRKHKKSKKKKKSKDK
ERHRESGSSDVDSDRATETKKKKKKKKKRRQRDSEAEQHSLGAARSHENRNSEERESRKR
HYYDIKDTKHNNGILPEKRRRTEYADGSSDHLPPSHHTSPTNGSTHRHLNGYTGNGYSQT
NGDS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaagtctgaccacgagtcagtcgggtgtaagcga
tctcccttcaccagtggtgacgtggggatggacggcagctgttccagcagctgggcagtg
ggacccaccatgcccagtgactctccgaggctgaaggctccaggaggctgcctgggccca
acgcctggagctgcagtctacaacagtacgccctcctctgtggatcggcccaaggagcaa
gtgataagcagtgatgacggcattgacttgccccagaaggtcctcttccctccagagcgg
ctcaacctaaaatggacccaggttcaccgcgttggtgcaggcctgcagaacatggggaac
acctgctttctcaactcagccctgcaatgtctcacctacacccctccgtttgccaactac
atgctgacacgggaacactccaaaacctgtcacgagccgggcttctgtatgatgtgcacc
atgcaaaatcacatcattcaggtttttgccaactctgggaatgtcataaagcccattggt
gtgctcaatgagctcaaaaggattgcaaagcacttccgctatggaagccaggaggatgcc
catgagttcctgcggtacacagtggatgctatgcaaaagtcctgcttacctggaaccaaa
ttggacaggcaaacgcaggcaaccactttcatccatcaagtatttggcgggtatctaagg
tccagagttaaatgtttaaactgcaaagcagtatctgatacatttgacccttttctggat
attactctggaaattaagacagctcccagtgtctccaaggctctggagcagtttgtcaag
ccagaacagctggatggagagaacgcctacaaatgcaccaagtgcaaaaaaatggtcaca
gcctcaaagagatttaccatccaccgcaactccaatgtgctcaccctctcactcaaacgc
tttgcaaactttagtggaggcaaaatcacaaaggatgtgaaatatccagagtacctggac
ttgcggcccttcatgtctcagtcccaaggggacccccaggtctacggactgtatgctgtg
ctggtccactctggattcagctgtcatgctggacactacttctgctatattaagggaagc
aacgggcagtggtatcagatgaacgactcctctgtatctgtcagtgacattaggtctgtt
ctcaaccagcaggcctatgtccttttctacatcaagtccagtgatgtgaagaaagcaggg
gactacagccacatgagccataacccaggcatccctggtcagtcgtctccacgaccggtg
gtgataccccgcatcaacaccaccgtccaccacaacaacattggcttcataggtccccag
ctgccaccacacatgaccaagagcactctccatgttaatgggaatggatctctgagggac
tatccaaccaactccaagcccagtaccagcagcagtgttgtgggaaaacctagccatgga
ctggcctcttcctcttcttccatctcccactcaatcagccggcccacaatgatcccagac
cacgacaaacggcagaagctttcattcttcattggacaaggcagacagaaccgcccatcc
tcctcctcgtcctcttacagccagccgtcctctgccagcagcagctcctcctccagctct
ctatcctcctcacagtctacctcagacgtccactcagacattcgatttgttccacgtcag
cttaatcgcgttaacggcacgtcttgcagtaacggggatcaccacactggagggaatgga
gcgtcattcttggtgccgtacggccaagagtcttctgaggaatcggaccaggagaactgt
ggcactctggataacggccgtttagccaagtctcaccttaatggaaacaacagaacagga
gagggctttgataattctcctaaacccaccaacggagagtcagggatgcaccgcaatggt
aacggattaaatggaccaacccatggcacctcgaaatccagtcaaaacggccaccattat
ggacaccacaaagtgaatggacacaacacccctgataaaatctctggcagtaatcatggc
agttcatcctctgtggctactgttgctgctaatgggctagtcagtgaccatggtcaaagc
aaagaggcacatacttctgcctcatcccatgccagttcttctcagagcatccatcctgct
gccagtgaaagccagcacctctccactcctgacacaagggctaaaactgtgtctgaaccc
ctgcctcagcatacagcatcctccgctgttagctctccaccttcagctactgctacaaag
acccattctgtcacatctagagaatctgcttcttctagccctgcggccttatccaccctg
ccagactgctcccaaagcaccaacggggcctctgcagctccacagaaggttagcagaagt
ggggatgaaacaatagatctaccacagaccagtggtccgtcagcagcgactgaaggacgt
acagatgctaaggagcaacaccaaaccaagcccagttctagaagcaatgaaggacaatct
tcccgagacagggagagagaccgactgtactctgactcgagcagagacagggagagacac
tacagggacaggagtcaggagcgagaaagtgacggtgatcgtcatcggtacagacgggac
taccacgattatcggcatcatcgctcgtacagggatcgtttgcctcctcatgatcgtaac
tacagggactgggagtctgagcgtcactgggagcggactcaccaccccagggggcgcgat
cgtgacaggtgctctcaccattaccactactatcaccaccaccggtccagagagaactct
gaccgtgggcggaggggacactgttatccctaccgtgaggagtctcatagtcgctctagg
tggcaggacgagagtcgagagtcccgggtggtgaaggacaagagcaacggcagggagagg
gactattactcgtcaaaagaggagaattcctcacctgccatagtgccagaaacctccaca
aagtccaagggctcaccccctcgggctcgtctctccacgtttgaatctgctccaaacagg
gaggatcaaaatcacaagaggactgctgatcctctgagcaaggagagggatgacagctct
gaggcccgtcgctctagaaaacacaaaaagagcaagaaaaagaagaagtcaaaggataaa
gagcggcaccgtgagagcggaagctctgatgtggattcagaccgagctactgaaacgaag
aagaagaagaagaagaagaagaagaggcggcagcgggacagcgaggccgagcagcacagt
ctaggagcagctcggagccacgagaacagaaacagtgaggagagggagagccgcaagcga
cattactatgacatcaaggacactaaacataacaatggtattttgccagaaaaacgccgg
cgcacagagtacgctgatggcagcagtgaccatctaccgccctcccaccacacctcaccc
acaaacggttcaactcatcgccatctcaacggatacacaggaaatggttacagtcaaacc
aatggcgactcctaa
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integrated database retrieval system
