Siniperca chuatsi (mandarin fish): 122867923
Help
Entry
122867923 CDS
T08948
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04382
Cornified envelope formation
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04518
Integrin signaling
schu04810
Regulation of actin cytoskeleton
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122867923 (itgb4)
04518 Integrin signaling
122867923 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122867923 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122867923 (itgb4)
04810 Regulation of actin cytoskeleton
122867923 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122867923 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122867923 (itgb4)
04515 Cell adhesion molecules [BR:
schu04515
]
122867923 (itgb4)
04090 CD molecules [BR:
schu04090
]
122867923 (itgb4)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122867923 (itgb4)
Exosomal proteins of bladder cancer cells
122867923 (itgb4)
Cell adhesion molecules [BR:
schu04515
]
Integrins
Integrin beta subunits
122867923 (itgb4)
CD molecules [BR:
schu04090
]
Proteins
122867923 (itgb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
PSI_integrin
I-EGF_1
EGF_integrin
EGF_Teneurin
EGF_2
EGF_TEN
vWA_SIBA-E
I-set
SEA
Motif
Other DBs
NCBI-GeneID:
122867923
NCBI-ProteinID:
XP_044035309
LinkDB
All DBs
Position
LG20:complement(20273922..20305188)
Genome browser
AA seq
1935 aa
AA seq
DB search
MGRWTLHLSVGLGLLAVLLTCCYAEENYCFASRAMTCSKCLQSGNGCAYCSDETFNGPRC
DLKENILAHGCGAAAIITAQSSMQIERKQQINIREQQSQVSPQQMSMTFLPGEEKMVDVE
VFAPTKGPLDLYILMDFSNSMADDLDNLKKMGKELASLVEKLSEDYTIGFGKFVDKVIEP
QTDMRPSKLAQPWPNSDPPFSFQNVIKLTKNLDFFTSELQKERISGNLDAPEGGFDAILQ
AAVCGDNIGWRNHSTHLLVFSTESSFHYEADGANVLSGILTRNDERCHLNAAGKYTMDIH
QDYPSIPTLIRVLGKHNIIPIFAVTNHSYTYYKKLQDYFPIAEVGLLQEDSSNILQVMET
AFENIRSKMSIRAEEKPRAFEAQFLHTSGSVAQYGAFDFKPGAIGNFKMRLKAQRMIEKL
PICQMDSNEKEGTIRVKPTTFNAAVNVKASVLCPTCDCEKTPILKAPRCHGNGDLVCGKC
QCYDGWLSTFCNCSASASALDTNQCKSSVKEEPCSGRGDCLECGTCVCYNPDQFEGPYCQ
YDKTQCPRYGGFLCNDRGSCVMGRCACSQGWEGNACECPKSNQTCLDSKGGLCNGRGKCV
CGRCECHNSDMEMTSTCEPNFQAQLGACEGTRSCVQCKAWKTGEKKKKEECDKCLPKIVM
VDELKESEKVLDSCSFRDEDDDCTYYYTVENNPTGHLEAQVLKKKDCPPASLLWLLPLLL
FLLLLLALLLLCCWKYCACCKTCFQSCLALLPCCRRGRMVGFKEEEYLLRQSLLTSDHLD
TPMVRTGPPKGTDVVRWKVTDNVHRGPNHPQALIKPNPKETIQFPISLRLNRLFSENLSR
PESRDAEQLRKEVADNLNEVYKQIPGAQKVQKTSFRLQRNAGKRQDYAIMDTVLSAPRCS
YPDIVKVTEKNVQSGNVHDLKVVPGYYTVATDREAAGAIEFQEGVETVDVHVPLFVKDED
DDKKQLQVEAMDVPLGIAEIGKRLVNITIIKEHATSVFSFLQPAYTYSRQDGLANIPISR
EIIEDGRTQVTYRTRDLTAKDKKDYVTVEGDLTYGPGETQKIVPVRLLELGEKDGLLEDK
QVKQFVMDLSNPRQGAKLGRYPRTTVTITDQPEPSAIMFKKGTQNFTTSQPTYTIPVVRT
RNQDSPATVKWRTKKAQRFELSGPLKFGPGETEKNIVIDPKAHPGPIQPETFQLELYDPS
SNASIGEKKTTLVNVTDEAPEIDLKQQKSYVNQKACSPGGHVLSPANPKAKATGPRSIHL
NWDPPPGNPLGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYEMRVCGYNAMGDG
YDTDKVTCQTLEDVPGEPGRLAFNVISPTVTQISWAEPAETNGIITAYEVIYTPIDDEQK
PVGTAKKVKIDNPKKRMLLIENLQNAQTYQYKVRAKNSVGWGPFRDATINLASQPARPMS
IPIIPDIPIVDAEAGDEYDSYLMYSNEVLKSPTGSKTPSVSGDDYTMNGKWDQNFLFPGG
SVTRNLSASSSPMSTLSSNYRGAGGSFTTETTTTYMSGPGGSRRQDMIGGGVHTSEVIMR
KRSENRGYTDENIRDSIVMGDVSSKFPDLGGFGYTGMQSSSQSQFSYGLSQGSRARTQSS
DVNEALYNLDRVLQDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDILGYSVLYQ
LLNGGEVKRINVTNPAENSVIIQDLLPNHSYLFKVKAQSQEGWGPEREGVITIESAVDPK
SPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYIVTCEQLHGGG
DMRSFQVNGDSAETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIESQDGSTLSQY
NSQSMARREVFQMPTEVSTRTNVSHTTLNDPFFSDGMMMTTQHTSGMVTRQVTKEVVQRS
VMGGATVTKKMFYES
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacattacatctctcagtggggctcgggcttctagccgtcctgttgacc
tgctgttatgctgaagagaactactgctttgcttctagggccatgacctgctcaaaatgc
ctgcagtctgggaatggctgcgcctactgctctgatgagacctttaatggccctcgctgt
gacctgaaagagaacatacttgcccatggctgcggtgctgcggctattatcacagctcaa
agcagtatgcagatagaaagaaagcaacaaatcaacattagggaacagcagtctcaagtg
tctccgcagcagatgagcatgacctttctgccaggagaggagaagatggtggatgtggag
gtgtttgctccaaccaaaggccctctggacctttatattcttatggacttctccaactcc
atggctgatgatttggacaacttgaagaagatgggcaaagagctggcttcactggtagag
aagctgtcagaagactacaccattgggtttggaaagtttgtggacaaagtgatcgagccc
cagactgacatgagaccctccaaacttgctcagccgtggcccaacagtgaccctccgttc
tctttccaaaacgtcatcaagctgaccaaaaacttggatttcttcaccagtgagctccag
aaggagagaatatctggcaacctggacgctcccgaaggaggttttgatgccatattgcag
gctgcagtttgtggggataatatcggctggcgcaaccacagcacacatctcctggttttc
tccaccgagtcatccttccactacgaggctgacggtgctaacgtgctgtcaggtatcctg
acgcgcaacgacgagcgctgccacctgaacgcagcaggcaaatacacaatggatatacac
caggattacccttcaatacccacactgatccgtgtgctgggcaaacacaacatcattccc
atctttgctgtcaccaaccactcctacacgtactacaagaaactccaagactatttcccc
attgctgaggttggtctgctgcaagaagactcatccaatatcctgcaagtcatggagact
gccttcgagaatatccgttctaagatgagcatccgtgcagaggagaaacccagggctttc
gaggcacagttcttgcacaccagtggaagcgttgcacaatacggggcctttgatttcaag
cctggagcaataggcaatttcaagatgcggctcaaagcccagcgaatgatcgaaaagttg
cctatctgtcagatggattcgaatgaaaaagaggggacaataagagtcaaacctacaacc
tttaacgctgccgtcaacgttaaggcgtcggttctgtgtccaacctgtgactgtgagaag
acgcccatccttaaagcacccagatgccacggcaacggagacctggtgtgcgggaagtgt
cagtgctatgatggctggctgagtacattctgtaactgctcagcaagcgcttcagctctg
gacaccaaccaatgtaaaagttcggtcaaggaggagccttgttcaggccgcggagactgc
ctggagtgtggaacctgtgtgtgctacaacccggatcagtttgaaggaccctactgtcag
tacgacaagacccagtgtccaagatatggaggcttcctctgcaacgaccgcggctcttgc
gttatgggtcggtgtgcgtgttcccagggctgggagggcaatgcctgtgagtgtcccaag
agcaaccagacctgtctggacagcaagggcggtctctgcaatggccgaggtaaatgtgta
tgcggccgctgtgagtgtcacaactctgatatggagatgacttcaacctgtgagccaaat
ttccaggctcaattgggagcgtgtgagggtacaaggagttgtgtccagtgtaaggcctgg
aagacaggagagaagaaaaagaaagaggagtgtgataagtgcctccctaaaattgtcatg
gtggatgaactcaaagaatcggagaaggtgcttgattcctgcagtttccgtgatgaggat
gacgactgtacgtactactacactgtcgaaaacaatccgacaggacacttggaggctcag
gtgctcaaaaagaaagattgtccccctgctagcctcctgtggttgctcccgctcctgttg
ttcctcttgttactgctggcgcttctgctgctctgctgctggaaatactgtgcctgctgc
aaaacctgcttccagagctgtcttgccctgctgccttgctgtaggagaggtcgtatggtt
ggcttcaaggaagaagagtatttgctccgccagtctctgctcacctcagaccatctggac
acaccaatggtgaggaccggcccacccaaaggaaccgatgtggttcgctggaaggtcacc
gataacgtacaccgaggacccaatcacccccaagctctgataaagcccaaccctaaagag
accatccagttcccgatctccctccggctaaacagattgttttctgagaacctgtctcgc
cctgaatccagagacgccgaacagctccgcaaggaagtggccgataacctaaatgaagtg
tacaagcagattcccggggcccagaaggtgcaaaagacctcattcagattgcagagaaat
gctggaaaaaggcaggactacgccatcatggacaccgtcttgtctgctcctcgttgcagc
taccctgatattgtcaaagtcacagagaaaaatgtccagtctggaaatgtccatgacctc
aaagtggtgcccggctactacactgtggccacagacagagaggctgcgggagccatagag
ttccaagaaggagtggagacagtagacgttcatgtgccactttttgtcaaggatgaagac
gatgacaagaagcagctgcaggtggaggccatggatgtgccactgggcattgctgagatt
gggaaacgtttggtcaacatcaccatcatcaaagagcatgccaccagtgtcttctcgttc
ctccagccggcctacacctacagcaggcaggacgggttggccaacatcccaatcagcaga
gagatcatagaagatggacgcacacaggtcacctaccgcacacgggacctcacagccaag
gataagaaggactatgtgacagtggaaggagacctgacctatggtcctggtgagacccag
aaaatagtgcctgttcgtctgctggagctgggtgagaaagatggcctcctggaagacaaa
caggtcaagcagtttgtcatggatctcagtaacccacggcagggcgccaagctgggacgc
tacccgagaactactgtcaccattacagaccaaccagagcccagtgcgataatgttcaaa
aagggcacccagaacttcaccacatctcaaccaacctataccatccctgtggtccgcact
cgcaaccaggacagccccgccacagtgaaatggcgcaccaagaaggcccagcgctttgag
ctatccggcccactaaagtttggtcctggagagacagagaagaacatagtgatcgacccg
aaggcccaccctggcccaatccagccagagaccttccaactggagctgtatgacccaagt
agcaatgcttctattggagagaagaagaccacccttgtcaatgtcactgacgaagcccca
gagattgatctgaagcagcagaagagctacgtaaaccagaaagcgtgctcccctggtggt
cacgttctctccccagcaaaccctaaggccaaagcaactggacccagaagcatccacctc
aactgggacccaccgcctggtaaccccctggggtacaaggtaaagtattggatctatggc
gacccagagaaagatgcccaggtcttagatgtgaagactcctcaagcggagttgaccaac
ctgtacccctattgtgactatgagatgcgagtgtgcggctacaatgcaatgggagatggc
tatgatacagacaaggtcacctgtcaaacactggaggatgtgcctggtgaacctggacga
ctggcctttaatgtcatcagtccaactgtcactcagatcagctgggcagagcctgctgag
accaatggcatcattacggcttatgaggtcatctacacacccattgatgatgaacagaag
ccagtgggcaccgctaagaaagtaaagattgacaaccccaagaagcgaatgctgttgatc
gagaacctccagaatgcccagacttaccagtacaaggtccgggccaagaacagcgtgggc
tggggccccttccgagatgccaccatcaacctggcatcacagcctgccagacctatgtcc
attcccatcattccagatatccctattgtggatgcagaggcaggagacgagtatgacagc
tacctgatgtacagcaatgaggtgctgaagtcccccacaggctccaagacacccagcgtc
tctggtgatgattacacgatgaatgggaagtgggaccagaacttccttttcccagggggc
tcagtgacacgcaacttgtcagcatcgtcctctcctatgtccactctgagctcaaactac
agaggggcaggcggctcctttacaacagaaacaaccaccacctacatgtccggaccagga
ggctcccgtagacaggacatgatcggaggaggagtacacacatcggaagtcatcatgagg
aagcgctcagagaacaggggttacacagatgaaaacatccgggactctattgtcatggga
gatgtgtcaagcaagttcccagatctaggtgggttcggctacactgggatgcagagcagc
tctcagagccagttcagctacggcctgtctcagggttcgagggccaggacccagtcttca
gacgtcaatgaagccctatataatctggatagggtgctccaggatgcacgactttctccg
ggtgttccagacacccccagcagactggtgttttctgctctgggtcccactgctctcaaa
gtcagctggcaggagccccactgtgagaaagacatcctgggctactctgttctctaccag
ctgctcaatggaggtgaggtgaagcgtattaatgtgacaaacccagcagagaactctgtg
atcatccaggacctgctgcccaaccactcctacctatttaaggtgaaggctcagagccag
gagggatggggtccagagagagagggagtcatcaccatcgagtctgctgtcgaccccaag
agtcccctcagccccatgccaggctcgccatttactctgagcactcccagtgccccgggc
cctctggtcttcactgctctgagccctgattccctgcagctcagctgggagaagcctcgt
aaacccaacggagacatcctgggctatatagtcacctgtgaacagctgcatggtggagga
gacatgcgctccttccaggtgaacggtgacagtgctgagaccagtctgaccgtcccaaac
ctgactgagaacgttccctacaagtttaaagttcaggctcgtaccacacagggcttcggt
cctgagagggagggaatcatcaccattgagtctcaggatggaagcactttgtctcaatac
aacagccaatcaatggcgaggagggaagttttccagatgccaacagaggtcagcacgcga
actaacgtctcccacaccactctcaacgaccccttcttctcagatgggatgatgatgacc
acacagcacaccagcggcatggtgacccgtcaagtcaccaaggaagtggttcagaggagc
gtcatgggaggagccactgtcacaaagaagatgttttatgaatcttaa
DBGET
integrated database retrieval system
