Siniperca chuatsi (mandarin fish): 122868015
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Entry
122868015 CDS
T08948
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122868015 (mms19)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122868015 (mms19)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122868015 (mms19)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
122868015 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
RTP1_C1
PORR
API5
Motif
Other DBs
NCBI-GeneID:
122868015
NCBI-ProteinID:
XP_044035468
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All DBs
Position
LG20:complement(17987542..18003085)
Genome browser
AA seq
1030 aa
AA seq
DB search
MAADSALLLSLVEEYVSGLQDNKAKDTAICVKDGQFTILQLVEALGLSLTSSQPHTRARG
VQLLSQVLQDCYGGLTEREVEVLIAFYENRLKDHYVITPPVLQGLRALTKCTALPPGSAV
SMLRSLFQDVHVQSLMLAERACVYNMLINLMETREAELKGLGADFVFGFVQSMDGERDPR
NLLLAFQVAKNIIHRGYDLGKFTEELFEVTSCYFPIDFTPPPNDPHGITKEELIQTLRDV
LTGTPRFAEFLLPLIIEKLDSDVQSAKLDSLQTLTACVSQYEHKDLAEFLEGLWASLRRE
VFQTSSEKIESAGLTALTALTSCLSRSVLSSDSEDSLCTFLDLILKDCQHHLCEPDLKLV
WPSAKMLQAACSASNRASHIITAAVMPALIEQYNSRTQCSQRRTLLEVVQRFIQSVKIQS
SENEESVFLAFRPSLCSMVFSALTESNSSLQITATLVLTSLVQQTGLLLDSDIELAVDHL
TRLLLMEEDDRVSLAVVECVGALAELHPAAFITKLIPRLKEEMFSEPMDQDNNRVATEQH
SHHAVRQRCLSALAAVSTQPSVVQESTPVLLEVLSSAHTGRVGFSVEEVVLACRSLQGIA
EQVQDTEETGRCFHDVIIPRLLSLALQAAVQGEGSSGRRSPLLEEVVLSAMVPVISTSCS
RLQPTLAGQTASRAVSLFLEGDVSFLPDNSFPSHIQLLKKQQGNSWSQSQMVCLLMGCVC
SLPRSVEVPQMDHLLSELEEMSCTCSHPLSYTSAAKCFAGLVNKRPQSDSLDSLIQSTMK
RVCSELDSASSSARTQAFTLMIWVAKALLLRYHPLSTALTDKLFSLLDDADLGPVAADGF
SLLMSDSADVLNRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALSNIVNK
LPKQVQVTELPALLSLLLEALSCPDQGIQLSTLSCLEPVLIDPPPALIQQLEALVNRLLA
LTSSPVMNVRIASLRCIHAVSLFPVHEVLPFRARVLRALARPLDDRKRLVRGEAVQARAE
WFLLGSPGGR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacagtgccttgttgctgtctctggtggaggagtatgtctcgggactacag
gacaacaaggccaaagatacagcaatatgtgtgaaagacggacagtttacaatactacag
ctggtggaagcactgggactgagtctgaccagctctcagcctcacactcgagccagagga
gtccagcttctctctcaagtgttacaggactgctatggaggtcttacggagagagaagtg
gaagtgctcattgccttctatgaaaaccgtctaaaggaccattacgtcatcacaccgcct
gttttacaggggctcagagcgctgacaaaatgcacggcgttgcctcctggctcagctgtg
tccatgctgaggtctttgtttcaggatgttcatgttcagtctttgatgctggcagagaga
gcctgcgtctacaacatgctcatcaacctcatggagaccagagaagccgaactaaagggt
ttgggggcagactttgtgtttggctttgtccaatcaatggacggagaaagggatcctcgc
aacctcctgttagccttccaggttgccaagaacatcatccaccgaggttatgatctaggt
aaattcacagaggagctgttcgaagtgacgtcctgctatttccccatcgacttcacccct
cctcccaatgacccccacggcatcaccaaagaggaactcatccagacactgagggacgtc
ctcactgggacgccacgattcgctgagtttctgttacctctcatcattgagaagctggac
tcagatgttcagagtgcgaagctggactcgctgcagactctgactgcttgtgtgtcacaa
tatgagcataaggacttggcagaattcctggagggattgtgggcatcactgcgcagagag
gtgtttcagacatctagtgagaagattgagtctgctggcctcactgctctcaccgcactc
acttcctgtctgtctcgctcagtcctcagctctgactctgaagactccctctgcaccttc
ctggatctcattctcaaagactgccaacatcacctgtgtgagccggacctgaagctcgtg
tggcccagcgccaagatgctacaggccgcctgcagcgcctccaacagggcgagccacatc
ataacagccgctgtcatgcctgctctcattgagcagtacaacagcaggacacagtgttct
caaagacgaacactactggaggtggtgcagcgatttatccagtccgtaaaaatccagtct
tcagagaacgaagagagtgtgtttttagccttccgtccgtctctgtgcagcatggtgttt
tcagctctgacagagagtaattccagtctgcagatcacagccacccttgtgctcacctca
ctagtacaacaaacaggtctgctgttggactctgacattgagctggctgtagatcatctg
accagactgctgctgatggaggaggatgacagagtcagtctggctgtggtggagtgtgtt
ggagccttagcagagttgcacccagcagccttcatcactaaactgatcccaagactaaag
gaggagatgttttctgagcccatggatcaagacaacaacagagtagctactgagcagcat
tcccatcatgcagtgcgccagcggtgtttgtctgctctggctgcggtgtccacccaacct
agtgttgtccaggagagcacgcctgtcctcttggaggtcctcagctcagcacacacaggt
cgggttggtttctcggtggaggaggtggtgttggcgtgtcgcagcctccagggaatagca
gagcaggttcaggacactgaggagacgggacgatgcttccatgacgtcattatcccacgc
cttctgtctctggcgctgcaggcagcagtgcagggtgaggggtcatctggtcgtcgtagt
cctcttctggaggaggtggtcctgtctgccatggtccctgtcatcagtacttcctgctcc
agactacagcccacgttggcgggacagacggcgtcgagggctgtatctctcttcctggaa
ggtgatgtttcctttttgcccgacaactccttcccttcacacatccagctgctcaagaag
cagcaggggaactcatggagccagtctcagatggtttgtctgctcatgggatgtgtgtgt
tcgctacctcgcagtgtggaggtgcctcagatggatcacctgctgtcagagctggaggag
atgagctgcacctgcagccacccgctgtcatacacctcagctgcaaagtgctttgctggc
ctggttaataaaagaccacagagtgattctctcgacagcctaattcagagcacgatgaag
agagtgtgtagcgagttggattctgcgtcttcatctgcacgcactcaggctttcactctc
atgatctgggttgccaaggctctgcttctcagataccaccctctgtccacagcactgact
gacaagctcttttctctgctggatgatgctgatctgggtcctgtggcagcagacggcttc
tcgctgctgatgagtgactctgcagacgtcctgaaccgcggttgccatgctgacgttcgc
atcatgtaccgccagcgcttctttagcgagaattcagccaagttggtccagggcttcaac
gctgcgcctcaagagaagaagcccaactacctgaaagctctgtctaacatagtcaacaaa
ctgcccaagcaggttcaagtcactgaactaccagcgctcctgtctctgctgttggaggcc
ttgtcatgtcctgaccagggcatccagctgtccaccctgtcctgtctggagcctgtcctc
atcgacccaccaccagcgctcatccagcagctagaagctttggtcaacaggctgctggcc
ctcacctctagcccagtcatgaacgtaaggatcgcctccttgcggtgcatccatgccgtt
tccctcttccccgtccacgaggtgttgccgttccgggcccgagtgctgcgagctctggcc
cggcctctggacgacaggaagaggctggtgaggggcgaggcggttcaggctagagcagag
tggttcctgttaggaagtcctgggggaaggtga
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