Siniperca chuatsi (mandarin fish): 122868016
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Entry
122868016 CDS
T08948
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122868016 (vps35l)
Membrane trafficking [BR:
schu04131
]
Protein recycling
Others
Retriever complex
122868016 (vps35l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
122868016
NCBI-ProteinID:
XP_044035471
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All DBs
Position
LG20:complement(17964505..17977197)
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AA seq
968 aa
AA seq
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MAAVQWRSCGRNYEAELQRCRPEAAAVEFGDYHPLKPIMVTDTKTHRGARKGSTSSSCSS
SSSAPPDPLSSMMDGTDPLSMFAAASGSETPAMSHSASAGDLGRKKKEKEEEVVGPDFDP
WSAKRGEILARFTTTEKLSINLFMGSDRGKAPSPGSSAVSEKVRTRLEELDDLEEGSQRE
LLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLIT
DILDTFGRLVYDRIWTMCSDPRPLPDSFTVEDVNDTAKETCLNWFFKIASIRELLPRLYV
EAAILKCNRFLNISGIQETLPRLTAMIRGIGDPLVAAYTRAYLCRVGMEVAPHLKDSLNR
NFFDLLGTFRQISGESVQNQLALQRVEVPEYLTLYSPAINWILQCIAYRAPEPLLTEMME
RCKKLGNNALLLNSVMRAFRPEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRSLACAD
PPESERLTILNEAWKVVTKVRSPRDYVNCAEIWVEFTCRHFTKREVNTVLADVIKHMTPD
RAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEVFIKH
QVEPTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLALLIIGFIRMVYFGRDFEQQLSF
CVEARATFCNLEPVLVQLIHTVNQLAMETSRVMRGSHSRKTAAFVRACAAYSFITIPSLS
SIFSRLSLYLLSGQVALANQCLSQADAFLKAAVSLLPEVPRSISVEGKLRSSESFLLDFI
NNFLSTLLVVPDHPEHGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQETY
LYSIPKVDSNETLYGGDPKFLSEINKLCETLIGQILDHLKGLGRDEQSTRRQGALAFSLF
GVLLAHGDLKNNKLSQLAVNLWNLSHKHGYCETRISVRTLEYIKHQAQQPDMTHLSDTVQ
RLALQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtacaatggcgttcctgcgggcgcaactatgaggcagagctgcagagatgt
cgtcctgaggctgctgcggttgagtttggagactaccatcccctcaaacccatcatggtg
acagatacaaagacccaccgtggggctcgtaaaggcagcacctcctcgtcttgctcctcc
tcctcctcagcgcccccggaccccctcagctccatgatggatggaaccgaccccctctcc
atgtttgccgcagcctcgggcagtgagactcctgccatgtcacacagcgcctccgcaggg
gacctggggaggaagaagaaggagaaggaggaagaggtggtgggaccagactttgatccc
tggtcggcaaaacgaggagagatcctggccaggttcaccaccactgaaaaactctcaatt
aaccttttcatgggttctgatagaggaaaagctccaagtccaggatcctcagctgtttca
gagaaagttcgcactcgcctggaggaactggatgatctggaggagggttcccagagagag
ctgctgaacctctcccagcaggattacgccaaccgcatcgaggagctgaaccagtccctg
aaggaggcctgggcctctgaccagaaggtcaaagccctgaagattgtcatccagtgctct
aagcttctgtccgacacctcggtgatccagttctaccccagcaagtttgttctcatcact
gatatcctcgacactttcggccggctggtgtacgacagaatctggaccatgtgttcagac
ccacgacccctaccagactcgttcacagttgaagatgtgaatgacacggcgaaggagacg
tgcctcaactggttcttcaagatcgcctccatcagagagcttctgcccagactatacgtt
gaggctgccattctcaagtgcaaccgcttcctgaacatatccggtattcaggagacgctc
cctcggttgacagccatgatcagagggatcggagacccgctggtggcagcgtacaccaga
gcttacctctgcagggtgggcatggaagtcgccccccacctgaaagacagcctgaaccgc
aacttcttcgatctgctgggcaccttccggcagatcagcggggagagcgtccagaaccag
ctggccctgcagagggtggaggtgcccgagtacctgacgctttattcacccgccatcaac
tggatcctgcagtgcatcgcctacagagctccagagcctctgctaacggagatgatggag
agatgcaagaagctggggaacaatgccttgctgctgaattcagttatgagggcgttcagg
cctgagtttgttgcagccagagccacagacttcatcggtatgatcaaagactgcgacgag
gccggcttcccaaagcacctgttgtttgggtctctgggtcgcagtctggcttgtgccgac
cctccagagtccgagagactgacgatccttaatgaagcctggaaggtcgtcaccaaagtc
cgcagtccccgggattacgtcaactgtgctgagatctgggtggagttcacctgtcgacac
ttcacaaaacgtgaggtcaacaccgttctggctgacgtaatcaaacacatgacgcctgac
cgggcgtttgaggacgcttatcctcagctgcagtcagtgatcaggaagatcctcacctac
ttccacgacttctccgtcctcttctccatggagcgtttcctgcccttcctagacatgttc
cagaaggacagtgtgagggtggaggtctgcagatccatcatggaggtctttatcaaacac
caggtggagcccaccagagaccctgtcatcctcaacgccatgttgcacatctgcaagacc
atgcacgactctgtcaacgctctcactcttgaggatgagaaaagatctttggctctgctg
ataatcggtttcatccgcatggtttattttggccgtgactttgagcagcagttgagtttc
tgtgtggaggccagagccaccttctgtaacctggagccggtactggtgcagctcattcac
actgtgaaccagctggcgatggagaccagtagggtgatgagaggcagtcactcccgaaaa
acggcggcattcgtcagggcgtgtgctgcctacagtttcatcaccatcccgtctctgagc
agcatcttcagtcgtctcagcctctatctgctgtctggtcaggttgcgttggcaaaccag
tgtctctcccaggcggatgctttcctaaaggcggcggtcagtcttcttcccgaggttcct
cgctccatcagcgtggaagggaaacttcgctcttctgagagcttcctgctggacttcatc
aacaacttcctgtctacgctgctggttgtcccggaccatccagagcatggcgtgctctac
ctggttcgtggtctgctcaacatggtccaggattacacctgggaggacaatagtgacgcc
aaggtgcgggtctacatcagcgctctgcccctgctggccgccatgagccaggaaacctac
ctctactccatccctaaagtggactccaatgagacactttatggaggagaccccaagttt
ctatcagagatcaacaagctgtgcgagactctgatcgggcagatcctggaccacctgaag
ggactcgggcgggacgagcagagcacacggcgtcaaggcgctctggccttttccctgttc
ggtgtcctgctggctcacggtgacctgaagaacaacaagctgagccagctggccgtcaac
ctgtggaacctcagccacaaacacggatactgtgagactcgaatctcagttcggaccctg
gagtacatcaaacaccaggctcagcagcctgacatgactcacctgtcggatacggtccag
aggctggcactgcagtcccgcacctga
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