Siniperca chuatsi (mandarin fish): 122868122
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Entry
122868122 CDS
T08948
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04136
Autophagy - other
schu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122868122
04136 Autophagy - other
122868122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122868122
03029 Mitochondrial biogenesis [BR:
schu03029
]
122868122
Membrane trafficking [BR:
schu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122868122
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122868122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
EIF3I
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
122868122
NCBI-ProteinID:
XP_044035711
LinkDB
All DBs
Position
LG20:15962847..15971209
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AA seq
443 aa
AA seq
DB search
MESQDVPDGPVVHRGFICASFNQDTTSLSVGTKTGYRLFSVTAVDKLDCIHEGVECPDVY
IVERLFSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQRLVVCLEESI
YIHNIKDMKLLKTLLNTPTNLSGLCALSVNHSNSYLAYPGSATIGEITVYDANNLSTLTL
IQAHDSPLAALTFNASGTKLASASEKGTVIRVFSIPEGQRLFEFRRGMKRYVSISSLSFS
ADAQFLCASSNTETVHIFKLEQHSPSQEEVSPTWSAYVGKMFTAASTYLPTQVSDMMHQD
RAFATVRLNMFGLKNICALATIQKLPRLLVASSDGFLYIYNVDPQDGGECVLVQKHRLFD
SSEEQVEQKEEEKPEDDAPQPASQSYAATVALSSTPPSSTTLMGYSEDGGAQKGEVIPEH
EFAEGPVCLDDENEFPPFGNQSN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaggacgtaccggacggccccgtagtgcaccgaggcttcatctgcgcctcg
tttaaccaggacaccacttctctgtcagtgggcaccaagactggctaccggctcttctca
gtcactgctgtggacaagctggactgcatccatgagggagtagagtgtccagatgtctat
atagtggagcggctgttctccagcagtctggtggtggtggtcagtctgtccatgccacgg
cgaatgaacgtctaccacttcaagaaaggtacagagatttgtaactacagctactccaac
aacatcctctccgtcaggctcaaccgacagcggctggtggtgtgcctggaggagtcgatc
tacatccacaatatcaaagacatgaaactactcaagaccctgctcaacacacccaccaac
ctctcaggtctttgtgctctctctgtcaaccacagtaactcttacctggcgtaccctggc
agtgccaccatcggagagatcactgtctatgatgcaaacaacctgagcactctgacgctg
atccaagcccatgacagtcccctggcagccctcaccttcaatgcctctggcaccaaactg
gccagtgcttctgagaagggcaccgttatcagagtgttcagcattcctgaaggacagaga
ctgtttgaattccgcagagggatgaaaagatatgttagcatcagttcattgtccttcagt
gcggatgcacagttcctgtgtgcctcaagcaacactgagacagttcatatctttaaactg
gagcagcacagccccagtcaagaggaggtgtctcctacatggtcagcatatgtgggcaaa
atgttcacagcagccagcacctacttgcccacccaggtgtccgacatgatgcaccaggac
agagccttcgccacagtacgactcaacatgttcggcctgaagaacatctgcgccctggct
acgattcagaagctccctcgcctgctggtggcgtcctcagacgggtttctctacatttat
aatgtggatccgcaggatggaggcgagtgcgtcctggtccaaaaacacaggctgtttgac
tccagtgaggagcaggtggaacaaaaggaagaggagaaaccagaggatgacgctccccaa
ccagccagccaatcatacgctgccactgttgctctctcttcaaccccaccctcctccacc
actctcatgggttactctgaggatggtggagcgcagaagggcgaagtcatcccagagcac
gagttcgctgagggccccgtctgtctggatgacgagaatgagtttcctccatttggcaac
cagagtaactga
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