Siniperca chuatsi (mandarin fish): 122868170
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Entry
122868170 CDS
T08948
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122868170 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122868170 (vti1a)
Membrane trafficking [BR:
schu04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
122868170 (vti1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
Laminin_II
BPS1
CAP59_mtransfer
Sec8_N
LamB_YcsF
Motif
Other DBs
NCBI-GeneID:
122868170
NCBI-ProteinID:
XP_044035829
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Position
LG20:10738886..10864423
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AA seq
224 aa
AA seq
DB search
MSSDFESYEQDFGTITAEVTNKIGRIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEAR
EIPIQSRAMYNSRLKSYKQEIEKLEKDFKRSRIAYSDEVRNELLGDDASSSEGQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILTNLHSDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRVLVFILGAIILLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgaatcatatgagcaggactttggaaccattacagcggaagtaact
aacaaaattggcagaattcccaaactaagtggagaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgctggagcagatggacctggaggcgcgg
gagatccccatccagagccgagccatgtacaacagcagactgaagagctacaaacaggag
atagagaagctcgagaaagactttaaaaggtcacgtattgcctacagtgatgaggtgcgc
aacgagctcctgggagatgacgccagttcctccgagggccagttgataaagttacgtgaa
gagagagcgcatctgttggacaacacagagaagctggaaaggtcatcacggagactggag
gccggctaccagatagcagtagaaactgaacaagtgggtcaggagattcttaccaacctg
cacagtgaccgtgagaagatccaaagagccagagaaaggctaagagaaacagacgccaac
ctgggcaagagttctcgcatccttactggcatgctgagaaggatcattcagaatcgtgtc
ctggtcttcatcctcggagccatcatccttctcaccatcatcctggccatctatttcaat
ctgcgaggccactga
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