Siniperca chuatsi (mandarin fish): 122868174
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Entry
122868174 CDS
T08948
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like isoform X1
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schu03016
]
122868174
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
122868174
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_12
TPR_1
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_11
TPR_17
TPR_8
CFAP70_TPR_C
TPR_7
ANAPC3
TPR-S
TPR_MalT
TPR_15
HEAT_2
TPR_20
TPR_4
TPR_Psidin_N
E2F_CC-MB
Motif
Other DBs
NCBI-GeneID:
122868174
NCBI-ProteinID:
XP_044035844
LinkDB
All DBs
Position
LG20:complement(593334..602315)
Genome browser
AA seq
482 aa
AA seq
DB search
MSSTLHSRLLQLQSRFTWDLKKEDIDLENLSTRLQDHIDLQLGERGAVTRTYSFLAYVRY
LQGRPAEAVSLLKQSEEKIGECYGKENEQRLIVMYGDLAWLKYHTGDYTQSHSYCQRVDD
ILLKYPAGSSTDLHPEVYGEKGWTYLKFLKSYYPKAIDCFRKALEVQPDDREWNAGYAIA
LYRTEPEPRFLETSMEDGESPAIKQLRRALEINPDDGVLLSMLALKLNAYQKHQEAEDLV
ERALKIGPDNPHVMRYIAKYLRIQGEDERSIDLLKRALKRTNQSAFIHHQLALCYKKKKI
AEQKSKPFNKQKVKQWRRLCIQHLEEAVKIKTTFVLAIADLAQLYGEEKNLIRAEELFQQ
GLRNLSETDKSICQVFYLRYADFHHYNTKQEAEAIDLYTKGLHLTTKTWEWKQCAKRLKE
IAERRLSISVDDDQAYGLLALVAKAEGDKKKAAEFYEKALDCDENKDEYLSALCELRMEL
QG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcactcttcactccagactgctgcagctgcagagtcgcttcacctgggatctg
aagaaggaagatattgacctggaaaacctcagcactcgactacaggaccatattgacctt
cagcttggagagcggggtgcagtgactcgcacctacagcttcttggcttatgtcaggtat
cttcagggtcgaccagcggaggcggtgtcacttctcaaacaatcagaggagaagatcggg
gagtgttatggtaaggagaacgagcagcggctcatcgtgatgtacggagacctagcctgg
ctgaaataccacaccggagactacacacagtcacatagttactgccagagggtcgatgac
atactgttgaaatatcctgctggttcctccacagatctccacccagaagtatatggagaa
aaaggttggacctaccttaagtttttgaaatcttactaccccaaagccattgactgtttc
cgtaaagcgttagaggtgcagcctgatgacagagagtggaacgccggctacgctattgcc
ctctatcgcacagaaccagaaccgaggtttttagaaacatccatggaagatggagagtca
ccggccatcaaacagcttcgccgagccctggagatcaaccctgatgatggcgttctgctg
tcgatgctggctctgaagctgaacgcctaccagaagcaccaagaggctgaagacctggta
gagagagcactgaagatcggtcctgacaaccctcatgtcatgcgttacatagccaaatat
cttcgcattcagggtgaggacgagcggtctattgatctgctgaagcgagcgctgaagagg
accaaccagtcagctttcatccaccaccagctggctttgtgctacaagaaaaagaagatt
gctgaacagaagagcaagcccttcaacaaacaaaaggtgaagcagtggaggcgtctgtgt
attcaacacctggaggaagccgtcaagataaagactacatttgtcctcgcaattgctgat
ctggcacagctgtatggagaggaaaagaatttaatcagggctgaggagttgttccaacag
ggattgaggaatttgtcagagacagacaaaagcatttgtcaggttttctatctgcgctac
gctgactttcatcactataacaccaaacaggaggctgaagcgatcgatctctacaccaag
ggtctacatttaacaacgaagacatgggagtggaaacaatgcgctaagaggttgaaggag
atcgcagagcgacgtctctccatcagcgttgacgacgaccaggcttacggtctgctggct
ctggtggccaaagcggagggcgacaagaagaaagccgcggagttttatgagaaagctctg
gactgcgacgaaaacaaagacgagtacctgtctgctctctgcgagctgcgcatggagctg
cagggatga
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