Siniperca chuatsi (mandarin fish): 122868232
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Entry
122868232 CDS
T08948
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122868232 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122868232 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122868232 (snf8)
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
122868232 (snf8)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122868232 (snf8)
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Gene cluster
GFIT
Motif
Pfam:
EAP30
MarR_2
AbiEi_4
CDK5RAP3
Sigma70_r1_1
DUF4896
Motif
Other DBs
NCBI-GeneID:
122868232
NCBI-ProteinID:
XP_044036037
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All DBs
Position
LG20:4347976..4355456
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AA seq
258 aa
AA seq
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MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRK
NSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHQRVLKGRGKYAQDVSQDDLMRAIKKLKVMGNGFGVIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIKDNLKWEKERACHVLDHLLKEGLAWLDSQAAGEAQYWLPALF
SELTSRDVTPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggagaggcgttggtgcaggagctattgccaaaaagaagctcgcagaggccaaa
tataaggaaagaggaactgttcttgcagaagaccaaattgtccaaatgtctaagcagttg
gagaccttcaagtccaacctggaagagtttgccagcaagcataaacaagaaataagaaag
aactcacagttcagggttcagtttcaggaaatgtgtgccaccattggagttgacccactt
gcctccggcaaaggtttttggtctgagatgcttggtgtaggtgacttctactatgagctc
ggtgtacagattattgaagtgtgcctcgccctcaaacacagaaatggagggcttattact
ttggatgaactccatcagagagtactgaagggaagagggaaatacgctcaggatgtgagc
caagatgacttgatgagagccataaagaaactgaaggtgatggggaatggcttcggggtg
attccagttggtggttcttacttggtccagtcagtcccagcagagctcaacatggaccac
actgtagttctacagctggctgagaaaaagggctacgtcacagtgagtgagatcaaggac
aatctaaaatgggagaaggaacgggcttgtcacgtcttggatcacctgctgaaagaaggc
ttggcttggctggactctcaagcagctggagaagcacagtactggctgccagctctcttc
tctgagctgacctcccgcgacgtcacaccagaggaggccaatcagatgacaccttaa
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