Siniperca chuatsi (mandarin fish): 122868463
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Entry
122868463 CDS
T08948
Symbol
cacna1ia
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122868463 (cacna1ia)
04020 Calcium signaling pathway
122868463 (cacna1ia)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122868463 (cacna1ia)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122868463 (cacna1ia)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
122868463
NCBI-ProteinID:
XP_044036375
LinkDB
All DBs
Position
LG21:complement(15267593..15418450)
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AA seq
2367 aa
AA seq
DB search
MSFDFGWVAMTSKECPVPLGSISLAGPGLSEEYGSAHADDIIEEVGPGDDVSIGSDLSTL
VVPFPELAPVVFFCLKQTTCPRNWCIRMVSSPWFERISIMVILLNCVTLGMYQPCENIDC
TSDRCQILQAFDAFIYIFFALEMVVKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSL
DLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIG
VQLWAGLLRNRCYLEENFTLSSGMTLPAPYYQPAEDDERPFICSLASDNGIMSCSDVPAR
REGGRTCCLDKEDALHRQALGLSPEPLANGSGAGEAIGLCINWNQYYTRCHTGHSNPHKG
AINFDNIVYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVV
IATQFSETKQREHQLMQEQRAQCLSSSTLASMAEPGDCYEEIFQLVCHVLRKAKRRSAAL
YYTLRGKPPPAGGGRGNRRGGGNVNGERHHSRHPRSSHCPHQSKQDHDSQPLANSISLAV
PQNPEDCSICALSLKEGARAVGSSANGEENEEDAVKETGKEENHLEERGDGERKRKRTCF
GHCKDIWNDMRRKLWGIVESKYFSRGIMIAILINTISMGIEHHNQPDELTNVLEICNIVF
TSMFTLEMILKLTAFGFFEYLRNPYNIFDGIIVIISVCEIIGQADGGLSVLRTFRLLRVI
KLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVP
DRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTSPCAALYFVALMTFGNYVLFNLLVA
ILVEGFQAEGDANRSYSDDDRSSCNFEENDKQKDSLHLSDPKICTLTPNGHLDLSPLRPG
LFPGERLTFALGSRKNSVISLGRANLEQRAMYSGRSYHNWGRPLPPHPQALWARRSSWNS
LGGCRPCSSSSPSASPAFTPTSARPFYGYGLGGLGGVVGGSLRIRGPRASSSPHRHLHHV
QPDEEESLLSPPAVAPRSLHFPHPMLPGHFVPRRDRRALSLELPHILQVPGPPHPPLPPH
HPLPPITLHAHHRKKSFSGGGSGGGLDSLSGLGGVHQDCNGKTPLSQLLQPPPRHPTEQA
GGANPQSQLMAEVFPQVNTRSKDREDLDDDIDYSLCFRIQKMLEVYRPEWCETREDWSVF
LFSPQNKFRQMCQSIIAHKLFDYVVLAFIFSNCITVALERPKILQGSLERVFLTISNYIF
TAIFVSEMTLKVVSMGLYVGEQAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRV
LRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFF
YCFGPDVKNITNKSDCLQANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAV
GVDQQPVTNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKR
QRRMEKKRRKAQKLPYYASYGHIRLMIHTLCTNHYLDLIITFIICINVITMSLEHYNQPR
SLDLALKYCNYFFTSTFVLESVLKLIAFGFRRFFKERWNQLDLAIVLLSVMGITLEEIEI
SAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIY
AALGVELFGELVCNEDYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPP
DHSTDVDYACNPSLQFISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDA
EIELELAQGTLCCMGAPGCGGARMDKGLVAAGSGPGGTTGGKERGGSRGEKGEGMKKMRH
AAATALPGAYNSCDSSQTLYSPAQESQWLDSVSLLIKDTLDGEMLMIDNLSGSVFHHYSC
PPPICKDCKGHPQEQIRMAEIEQASLKSEQLSDKSSSPALPDDLSLDEHTAYQLLTQEGK
GRCSSDSRSSEEAGGHQTQTVVQSQVQGFGQPCWALSTGIEIETALQEMEMQTYQPHMCS
PHSSPGGVSSSSSKGRNKEGEGGASGISPLFHLPAEFFHPAGAAIPAPSRSRSLRLSRGL
RLTSPASWASLRSPGAHSKMLCTQYTSHSDSSLATGSSEGSLQTTLEEGLSFSISPPQNL
ELPLPTAPLPLVCPLQLPEDSTAISSPVHTLRPRPIPSSALTLQATRGHQRSQSSGRGST
SPGYTRDDSIDPSDEDLGIGIGSSIGGCGSSQAGNSEHLSETLSSLSLTSLLSPSSLVYP
GGAVKKCNSTGNLDQGEMLLSSRGREGRREILGLELMDPQGFLANPWTGVLVDTRRGEGR
GEIGDGEQGFKGKSSSQTTVGPCRKNR
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgatttcggctgggttgccatgacgagcaaggagtgtcctgtgccgctgggg
agcatttccttagcagggccagggctgagtgaggaatacggctctgcgcatgctgatgac
atcattgaggaagtgggtccaggtgatgatgtcagtatcggcagtgacctaagcactctt
gtggtgcccttcccagagctggcgcctgtggtcttcttctgccttaagcagaccacctgt
cctcgcaactggtgcatccgtatggtctccagcccgtggttcgagaggattagcatcatg
gtgatcctgctcaactgtgtgacactgggcatgtaccagccctgtgagaacatcgactgc
acctcggaccgctgccagatactgcaggccttcgatgcattcatctacattttctttgca
ctggagatggtggtaaagatggtggctcttgggatctttggccgtcgctgttacctggga
gacacctggaacaggctggacttcttcattgtcatggctgggatggtagagtactccctg
gacctgcagaacatcaacctgtcggccattcggacggtgcgggtccttcggcccctcaaa
gccatcaacagagtgccaagtatgcggatcctggtgaacttgctgctagatactctaccc
atgctaggcaatgtgctgctgctctgcttcttcgtcttcttcatcttcggcatcatcggc
gtgcagctgtgggcggggttactgaggaaccgctgctacctggaggagaacttcaccctc
tcttcaggtatgaccctgcctgctccgtactaccagccagcggaggatgatgaacgcccc
tttatctgctccctggcgtctgataatggcatcatgtcatgttctgatgtgccggcgagg
cgcgaaggaggacgcacatgctgcctggacaaggaggacgcgctccacagacaggctctg
ggcctgagtcctgagccattggccaatggtagtggtgctggtgaagcaattggtctgtgt
atcaactggaaccagtattacacccgatgccacacaggacatagtaacccccacaaaggt
gccatcaactttgacaacattgtctatgcctggatcgtaatttttcaggtgatcactctg
gagggctgggtggagatcatgtattatgtcatggatgcccattccttctacaacttcatc
tacttcattttactcatcattattggttcattcttcatgatcaacctgtgcctggtggtt
atcgccacccagttctcagagaccaaacagcgggaacaccagctgatgcaggagcaaagg
gcgcagtgtctgtcctcctccacactggccagcatggctgagccgggagattgttatgag
gagatcttccagctggtctgccatgtcctccgcaaggctaagaggagatcggcagctctc
tactacacgctgaggggcaagcctccgccagctggtggaggtaggggtaacaggcgtggt
ggagggaatgtgaacggagagcggcatcattccaggcacccaagatcatcccactgtccg
caccaaagcaagcaagaccacgactctcagccattagccaactccatcagtctagctgtc
cctcagaatcctgaggactgctctatatgtgctttatcactgaaagagggggcgagggct
gtgggatcctctgccaacggggaggaaaatgaagaggatgcagtgaaagagacgggcaag
gaggagaaccatctagaggagaggggcgatggagagaggaagaggaagaggacatgcttt
ggacattgtaaagacatttggaatgatatgaggaggaaactttggggcattgtggagagc
aagtacttcagcaggggcattatgatcgctattctcatcaacaccatcagtatgggcatc
gagcatcacaatcagcccgatgagctgaccaatgtcctggagatctgcaacattgtcttc
accagcatgttcaccctggagatgatcctaaagctgactgcttttggcttctttgagtac
ctgaggaacccctataacatctttgatggcatcattgtcatcatcagtgtgtgtgagatc
atcggccaggcagacggcggtctgtcagtgctgcggaccttccggctgctgagggtcatt
aagctggtgaggttcatgcctgcgctgaggcggcagctcgtggtgttgatgaagactatg
gacaacgtggccactttctgtatgctgctcatgctcttcatcttcattttcagtatcctg
ggaatgcatatctttggttgtaagttcagtctgaagacagaggcaggagacaccgtgcct
gacaggaagaactttgactccctgctctgggccatcgtcactgtctttcagattctgact
caggaggactggaacatggtgctgtacaatggcatggcatccacctcgccctgtgctgct
ctctactttgtagctcttatgacatttggaaactacgtgctcttcaatttactggttgcc
atcttggttgagggtttccaagctgagggcgatgcaaaccgctcttactcggacgatgac
aggtcttcctgtaattttgaggagaatgataagcagaaagactctcttcatctctcagac
ccaaagatatgcacactgacccctaatgggcacctggatttgtccccactgcgccctggt
ctgtttccaggagagaggttgacctttgctctcggctccaggaagaacagtgttatttct
cttggcagagccaacctggagcagagggctatgtattctggccgaagttaccataactgg
ggccgcccactgcctccccatcctcaggccttgtgggcccgtcgttccagctggaacagc
ctgggaggttgccgcccctgctcctcctcgtctccctccgctagtccagccttcaccccc
acctctgcaaggcccttctatggctacggcctggggggtcttggtggagtggttggagga
agccttcgtatccgtggtccccgtgcctcttcatccccacaccgccacctccaccatgtc
caaccagatgaggaggagtctctcctctctcctcctgctgttgctccacgctctcttcac
tttccccatcctatgctcccgggccactttgtacccaggagggaccgtagagcactatca
ctagagctgccccacattctgcaggtcccaggacccccacatcctccactgccaccacac
caccctctgcccccgataacactccatgctcatcacaggaagaagagcttctctggtgga
ggtagtggcggtgggctcgacagtttgagcggcttaggaggggtacaccaagactgtaat
gggaaaactcctctgtctcagcttctccagccccctcctagacacccaactgagcaggct
ggaggggcgaacccccagagccagctgatggccgaagtcttccctcaggttaacacacgc
agcaaggaccgggaggacctggatgatgacattgactatagcttgtgcttccgaatccag
aagatgttagaagtctacagaccggaatggtgtgagaccagagaggactggtctgtcttc
ctattctccccacagaacaagtttagacagatgtgccagtccattatagcccataagcta
tttgactatgtggtgttggccttcatcttctccaactgcatcacagtagctctggagagg
cccaagatactacagggcagcttggaaagagtctttctcaccatctccaactacatcttt
actgccatctttgtgagcgagatgacactcaaggtggtatccatgggtctgtatgtgggt
gaacaggcttatctgcggagcagctggaacattctagatggcttcctggtttttgtgtct
ttaattgacattgttgtgtccatggcgggtggggccaagatcctgggtgtgcttagagta
ctcaggctgctcagaacattgcgtcccctcagggtgattagcagagctccaggtttgaag
ctggtggtggagaccctcatcacctccctcaaacccattggcaacattgtcctcatctgt
tgtgcatttttcatcatctttggcattcttggggtacagctatttaaaggcaagttcttc
tactgctttggccctgatgtcaaaaacatcaccaacaagtctgactgtctgcaagccaac
tacaagtgggtccatcataagtacaattttgacaacctgggacaggctctgatgtccctg
tttgtactagcctccaaagacggctgggtcaacatcatgtatcacggactggatgctgtg
ggtgtagaccaacagccggtgaccaacaacaacccatggatgctgctgtatttcatctcc
ttcctcctcatcgtcagcttctttgtcctcaacatgtttgttggcgtggtggtggagaac
ttccacaagtgtcgccagcaccaggaggtggaggaggccaaaaggcgtgaggagaagcgt
cagcggcgcatggaaaagaagaggagaaaagcccaaaagctgccctactatgccagctat
ggccacatacgcctgatgatccacacactgtgcacaaatcactacctggacctcatcatt
accttcatcatctgcatcaacgtcatcaccatgtccttagagcactacaatcaacctcgt
tctctagatctcgccctgaagtactgcaactatttcttcacctccacttttgtgctggaa
tcagtactcaaactcatcgccttcggctttcgccgcttcttcaaagaaaggtggaaccag
ttggacctggccattgtacttctgtcagtgatgggcatcaccctggaggagattgagatc
agtgctgccctgcccatcaaccccactatcatcaggatcatgagagtacttaggatagca
cgagtgctgaagctgctgaagatggcgacaggaatgagagccctgttggatacggtggtc
caagccctgcctcaggtgggtaacctgggcctgctcttcatgctgctgtttttcatctac
gccgccttaggagtagagctttttggagaacttgtttgtaatgaagactacccctgtgag
ggtatgagtcgtcacgctacctttgagaactttggcatggccttccttaccttgtttcaa
gtctccacgggcgacaactggaatggcataatgaaggacacattgcgggagtgcccacca
gaccacagcacagatgtggactatgcctgcaatcctagccttcagtttatctcgcccatg
tactttgtctccttcgtgctcaccgcccagtttgtgctcatcaacgtggtagtcgctgtg
ctgatgaagcacctggacgactccaacaaggaggcccaagaggaggcggagatggatgca
gaaattgagctggagctggcccagggcaccctctgttgcatgggcgcccccggctgcggg
ggtgcgaggatggacaaaggactagtcgctgctggatcagggcctggaggcacaacaggg
ggaaaggagagaggaggttccagaggagagaagggagaaggaatgaagaagatgcgacat
gcagcagccactgcgcttccaggagcgtacaactcctgtgactccagccagaccctgtac
tcaccagcacaagagagccagtggctagacagcgtgtctctcctgatcaaggatacattg
gatggggagatgctgatgatcgacaacctctctggttctgtcttccaccactactcctgt
cctccacccatctgcaaagactgcaagggccacccacaagagcagatcaggatggcagag
attgagcaggcatcgctgaagtcagagcaactgtcagacaagtcctcatcccctgctctg
ccagatgacctcagcctggacgaacatactgcctaccagctgctgacgcaagagggcaag
ggaagatgcagcagtgactcccgcagctctgaggaggctggaggccaccagactcagacc
gtagtgcagagccaggtgcaggggtttggccagccctgctgggctctcagcactggcatt
gagatagagactgcactacaggagatggagatgcaaacataccaaccacatatgtgctca
cctcacagtagccctggtggtgtttccagcagcagcagcaagggaagaaacaaagaagga
gaaggaggagccagtggcatttctcctctcttccatctgcctgcagagttcttccaccct
gcaggagcagccatcccagcgccttcccgcagtaggagcctacggttgtcgaggggcctt
aggctgacctccccagcctcctgggcttcgctccgctctccaggagcccatagcaagatg
ctctgtacacagtacacatcccacagtgactcatcccttgctacaggcagctctgagggc
agcctccagactaccctggaagaaggactgagcttcagcatttctccaccacagaacttg
gagttgcctttgccgacagctccgttaccacttgtgtgcccactccagctgcctgaagac
agcacggctatttcctccccagtccacaccctgagaccaaggccgatcccctcatcagct
ctcaccctccaggccaccaggggccaccagcggagtcagagcagtggccggggtagcacc
agcccaggctacacacgtgacgactcaattgacccttcagacgaggacttgggcataggc
attggatcatcaattggtggttgtggttccagccaagcaggcaacagtgaacacttgtca
gagacactgagcagcttgtcgctgacatcactgctgtcacccagctccctggtgtacccg
ggaggagcagtgaagaagtgcaacagcacaggcaacctggaccaaggggagatgctgctg
tcgtcccggggtagggagggccgcagggagatcctgggcctggagcttatggacccccaa
ggcttcttggccaacccctggacaggggtattagttgatacaagaagaggagaaggaaga
ggggaaataggagatggcgagcaagggttcaaagggaagagctcaagccaaacaacagta
gggccttgtcggaaaaacagatga
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integrated database retrieval system
