Siniperca chuatsi (mandarin fish): 122868470
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Entry
122868470 CDS
T08948
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122868470 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122868470 (gtf2f1)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
122868470 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
122868470
NCBI-ProteinID:
XP_044036389
LinkDB
All DBs
Position
LG21:15605753..15614850
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AA seq
539 aa
AA seq
DB search
MTSLGSSSSSATEYTVRVPKNTSKKYNIMAFNSGDRVNCSTWTQARMERDMSARRIYGEE
ETPEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGQRKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPLAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFREQERGEDEEDENEKSGKKKKKKGGRGGDLRIHDLEDDLEMSSDDSDSSMGEDGESKT
KAKKDTGKGKGKKKKRKSNDHEALEDSDDGDYEGLEVDYMSDESSSDEEPEKGKPSKGED
LPKGIDEASESEEESEEEKQNEEEAKEEEEEEEGKKTPVQVEKKKKKDSSGESDSSDDSD
IEGETASALFMKKRTPPKRGGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQAK
FLFPTGKRQTPGPSTDSPAAKRLKMEPSSQSPVPSGKTTPQPPSGKSTPSSSDVQLTEEA
VRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgacttcactggggagcagcagttcctcagccacagaatacactgtgcgagtccccaaa
aacaccagcaagaagtacaacatcatggctttcaattcaggagacagagtcaactgttca
acctggacacaggctcgtatggaaagagacatgagtgctcggaggatatatggggaggaa
gagacgccggaaggagcggctggcagcgagtttggcaaaaaacagcgtgaggaagcgcgg
cggaagaagtttggtattgttacacgggagttcaaagtggaggaccagccctggattctc
aaggtcaacggcaaggccggcaagaggttcaaaggtcaaaggaagggtggtgttacagaa
aatgcatcctactacatctttacacagtgtcctgatggagcttttgaggccttccctgtc
cacggctggtacaactttacaccgctggccaagcaccgaactctcactgctgaggaggct
gaggaggagtggggcagaaggaacaaggtggtgaatcacttcagcatcatgcttcagaga
cgtttccgagagcaggagcgtggtgaggatgaggaagatgagaatgagaagtcggggaag
aagaaaaagaagaagggtgggagagggggcgacctgcgcattcatgacctggaagacgac
ctggagatgagcagcgatgatagtgacagcagtatgggggaagatggcgagagcaagaca
aaggcaaagaaagacacagggaaagggaaaggaaagaagaagaagagaaagagcaatgac
cacgaggccctggaggacagcgatgacggtgactacgagggtctagaggtggattacatg
tcggatgaaagcagttcagacgaagagccagaaaagggaaagcccagcaaaggagaggac
cttcctaaagggatcgatgaggcgtctgagagtgaggaagagagtgaggaggagaaacag
aacgaggaggaagcaaaagaggaggaagaagaagaggaaggaaagaaaaccccggtccaa
gtggaaaagaagaagaaaaaagacagcagtggcgagtcggacagctcagacgacagtgac
atcgagggagagacggcctccgctctgttcatgaaaaagcgcacgcctccgaaacgtgga
ggtgggcgtggctctgcaggcagctccaggactggcagtcgccccgggacaccatccata
gactctgcctccacctccaatacactccgtgctgctgccagcaaactagagcaagctaaa
tttctctttcccacaggtaagagacagactccaggtcctagcactgactcaccagctgcc
aaaaggctgaagatggagcccagcagtcagagccctgttccctctgggaagactacgcct
caacccccatcaggcaaatccactcctagctcaagtgatgtgcagctaacagaggaagcg
gtgcggcgctacctgatccgtaaaccgatgaccaccaaagacctgctgaagaagttccag
accaagcgtacaggtttgagcagtgagcagactgtaaacgtgctggcacagatcctgaag
cgcctcaatccggagcgcaaaaatgtgaatgacaaaatgcacttctatctcactgaataa
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