Siniperca chuatsi (mandarin fish): 122868578
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Entry
122868578 CDS
T08948
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122868578
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122868578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
122868578
NCBI-ProteinID:
XP_044036601
LinkDB
All DBs
Position
LG21:complement(14003234..14058335)
Genome browser
AA seq
2237 aa
AA seq
DB search
MQSFRERSGGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGSGHT
RSGYEAHSLANPTSMPPAGGPGTGGVPKDCYSQQAYPGYPGNGGGNGSGNGGSAPSQAKK
SYRGGKVPPPNPSQHLQGPGGYSNHMGPGNYSAQYMSEGHLQQKWEDPAQLAQYDQEMVG
RMEAGGTPAPGSSQYMDQNMLGHSQTQCHQPSTPAYTSPHHQPHPPNPAPSPLMYPQSHL
HYPQHSPSPSPYMEKCSPMPHCYKGYNMPPNSQYSRQMSSHSNLKQGGYRSTQNSYGYQQ
PPSRGYEQQPPLQAMTNPQEPHPKYQHYSQPQQNYCLSELSVRSPEQYYQTCSPSSSHSP
ARSVGRSPSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSAGMQEQASTNTMLMPPR
SHPSPNVPHAAPHSYTTTPQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLL
SEALVANKKGSKRNSGGSNSSAGSGASSKKGEEYKSPPYSDGGGVSVGGGPMQDPYSTPQ
HQPMPMELHEGGYSSSSDEQLERGYYYCGQGRSPAQAPNNTQLSLDTASSCSMTSPDDMS
TRSGDSGLHNLTPDPTRCQSGQVGDGMSTPVKSIGDERSPTSITIPSPMKQERDSPSDIQ
HINEPVKENFEESAWTEKSADKEDVTTEKNPDHERDSDSTKSTENLEKWSDEEKCPALYS
KVNKGVTEKSYCYKETVYQGVQSKYDPDVRDSVEQSPAALSDSSHKEHFGQEMKSEPFKS
ESPTASESSVKTLPFISRGDLEHDQYSTEKEDSSENTSPTPQVEALDESNSDKRENRDED
DEEEKGEGEVEAYEEEEDEIQKQKQHSLSPPLSTEVREELGEGEKVSQSSAEEHMNNRDG
PEKPPGDLCSRTESQSTEFHTDNESAGAPVHPNAAAATADASARESAIGDTAPQPHSAMP
VFSALNDKATPPAQARDHIDHSDAKVLEPDSPQLPGKSILPSAPSWADTPPSPKKGDEDM
EPGISCASAVTPLAKPEPVAPSAQPRAFGRKHARGRRRIMHSGVGIRRQLSLEREGGKEE
EGAPSLAQKPCMPPSKTVLFSDQMDLAHQESIVSHTPKMLTDGFRSRMCTRSFNAPDLPP
KVEPHVKRKPGPKPGSKPGLKPGPKPGLKPGPKPGSKPGPKPGPKPGLKPGPKPGPKPGP
KPGSKPGPKPVLNEPELPAKIETPVKRKPGPKPGSKPGPKPGSKPGPKPALKPGPKPGPK
PGTKPADVLPPTDTAPIKAPVGRPKGSVSKAKLVQQVSSSLQSLTGLQSRGRGKGSLKAT
ISQVNQDVKPVNQEEKPSNHEAKAPEKEGKNMVLRSRKPSQEKLSKEKEKVIGEDILPQT
LTEIKASDVSPKVEEAVTVEQTLTPIPNAVKNTDVPADPPAPLAPPVPTEQSEEKTSLPL
KRKPSPELSSMAVKKKRGPKPKPKPLPPQPPLLEVVAMPKEKGVRGPKRKRGPPKRASVV
TPPPKDTPSNISETDITSDVPVVPPQCPTKTKVLPPRKGRGQKYEAMVQKITSPSSKKHL
PIPQIDSNLTDDVTTKALSQHVLKEGETSMLINSTEMIEGEVKSIESRQEGAKQQRKEEM
MQEKEKHEVSQKESMPEEVRQWVEEEIVNKETRQENIKPGTKQDVGADKVWSTMGTPVEV
RAPGKWTQQASEGVSSAATKSARTKRKRWAMVESTDASVVALEAGSLIVTTPRLAKQRAI
KNNHEMHLKQRRKKRKGQAPLEETETVEEPNIETAEQQQERVEEKVTPTESIVPLPISPH
EITITPQVTSTELIQKPRRGRKPSANPTKRKRGKVSSEQIPGKPLKVHKKPGPKPGMKDA
IEVIEAVVRAAGCERAEKEEREKEERERENREKQKTCIVGPVVTISEKQTETISVKRIRR
KPVHQNSKLSFCPYVRINNSRDFSSWCAIVNKPEDAVIFQRRRKKGILRMRNPFTVAKVV
PHTAAMLKGPLVNKNLIDRCLTCSLCGKPANYRDLGDLCGPYYTEDGVPRKILTIRHTES
LREESEKTNDNNSSSTEEPGNSSKNEGKVSTEKEGNTEASTQEGSSGRHHHWRYRRAERT
ERMGQEGGPRRLTLRERFRRMKQLQAISTGASSDQEGSNSMFQRLQVEAEAKEHWAHENC
AIWTKGVIMVAGRLYGLKEAANNSAQTSCYKCQIVGASLSCCWRGCSHKYHYVCAKEIGC
TFHEDDFSIKCPKHEDV
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgtgagcgcagcggtggttaccacagcaaccaaccctgctaccagcag
gagccccatgaattatcccgactggagacctatcgccaacacccgcatcatccccacccc
cagcacccgcacccaggccccggtccacatccaggcccaggcccaggctcagggcacacc
aggtcaggctatgaggctcattcactggcgaaccccacaagcatgcctccagctggagga
ccaggaactgggggagtacccaaggactgttacagccagcaagcctaccctggttaccca
ggcaatggtggaggaaatgggagtggaaatgggggctcagcaccctcacaggcaaagaaa
tcctacagaggaggcaaagtgcccccaccaaaccccagtcagcacctacagggtcctggg
ggctatagtaaccacatgggccctgggaattactcagcccagtatatgagcgagggccat
ctccagcagaaatgggaggacccagcccagttagcacagtatgaccaggagatggtgggg
cgtatggaggctggtggtacccctgcacctggctcctctcagtacatggaccagaacatg
ctgggccactcccagacccagtgccaccagccctccacccctgcctataccagccctcat
caccagccccaccctcctaaccctgccccctcccctctcatgtacccccagagtcacctg
cactacccccagcactcaccctccccttcaccgtacatggaaaagtgcagccctatgcct
cactgttataaaggttacaacatgccccccaattcccagtatagcagacaaatgagcagc
cacagcaatctgaagcaggggggttacagatcgacccagaacagttacggctaccagcag
cctccctccagaggttatgagcagcagccccctttacaggccatgaccaacccccaggag
ccccaccctaaataccaacactacagccaaccccaacaaaattactgtctctcagagctg
tctgtcagatcaccagaacagtattatcagacttgtagcccctcctcaagccactcccct
gcacgctctgtagggcgctccccctcgtacagctccaccccttcaccattaatgaccaat
ccagagtcgttccagtatggccaacctcccatgacccctggggcagcctcctcttcttca
tcctcttcagctggtatgcaggagcaagccagtaccaacaccatgttaatgccaccacgc
tcacacccctcacccaatgtgccccacgcagcaccccacagctatactaccacaccgcag
gtccccaccatgaaagaacgcttctcagagaagctgttgtcaaaccccagcttgtggagc
ctgaatgccctcacctctcaggtagagaacatctctaataatgtccagcagctactgctt
tcagaggccctggtggccaacaagaaaggcagtaagcgcaacagtggagggagcaacagc
agtgctggaagtggagcatcctccaaaaagggtgaggagtacaaaagtcctccatattca
gatggtggtggtgttagtgttggtggaggccccatgcaggacccttactctaccccacag
catcagccaatgcccatggaactccatgagggaggctactccagcagtagtgatgaacaa
ctggagaggggctactactactgtggccagggcagaagtccagcacaggcccccaataac
acacaactcagcttggacacagcatcttcatgctccatgacatctccagatgatatgtct
accaggtctggggactcaggtctgcacaaccttacccctgaccctactagatgtcagtca
gggcaggtaggagatggcatgagtactccagttaaaagcattggtgatgagaggtctcca
acaagcattacaatcccgagtcccatgaaacaagaaagggactccccttcagatatacag
catatcaatgagcctgtcaaagagaactttgaagaatcagcctggacagagaaatcagct
gacaaagaggacgtgacaacagaaaaaaaccctgaccatgagagagattcagactcaact
aaatctacagagaatctggagaaatggtcagatgaagagaaatgcccagctctctacagc
aaagtaaacaaaggggtgacagaaaaaagctattgctataaggagacagtgtaccaaggg
gttcagagcaaatatgaccctgatgtgagagactcagttgaacagtctccagcagctctc
tctgactccagccacaaggaacactttggccaagagatgaaatcagagccattcaaatct
gagtccccaactgcttctgagagctcagtgaaaacattgcctttcatttctaggggtgac
cttgaacatgatcaatattccacagaaaaggaggacagctcagaaaacacctctccaacc
ccccaagttgaagccttggacgagagcaactcagacaagagagagaacagagatgaggat
gatgaagaggagaagggggaaggagaggttgaggcctatgaagaggaagaagatgaaata
cagaaacaaaagcaacattctctttcccctcctctgtctacagaggttagggaggaactg
ggggagggggagaaagtcagccagtcatcagcagaggagcacatgaataatagagatggg
ccagagaagcctcctggagatctctgcagcaggacagagagtcagagtactgagttccat
actgacaatgagtctgcaggggcgcctgtccatccaaatgcagcagcagcaacagcagat
gcttctgcaagggaatcagcgattggtgacactgctcctcagcctcactctgctatgcca
gtcttctcagctctcaatgacaaggcaacacctccagctcaggccagggatcatattgat
cacagtgatgctaaagtgctggagccagactctcctcagctgccagggaagtcaatactt
ccctcagccccctcctgggcagacactccaccctcccccaaaaaaggtgatgaggacatg
gagccgggcatcagctgtgccagtgctgtgacccccttggccaagccagagcctgtggct
ccatctgctcagccaagggcatttggacgtaaacatgccaggggcagaagaagaatcatg
cattcaggtgtgggaatcaggcgacagctaagcttggagagggaggggggaaaggaagag
gaaggagccccctcacttgcacagaaaccctgcatgcctccaagcaaaactgtgttattc
tcagatcaaatggacctagctcatcaggaatctattgtgagccacactcctaaaatgcta
actgatggttttcgttcgagaatgtgcactcgttcattcaatgcaccagacttgccaccc
aaagttgagcctcatgtgaagagaaaaccaggcccaaaaccaggttcaaagcctgggctt
aaaccagggccaaaacctggactaaaaccagggccaaagccaggatcaaaaccaggtcca
aaaccagggcctaaacctggcctaaaacctggaccaaagcctgggccaaaacctggacct
aaaccaggatctaaaccaggaccaaaacctgtgctaaatgaaccagagctgccagcgaaa
attgagactcctgtgaaacgaaaaccaggacccaaaccaggttcaaaacctgggcccaaa
cctgggtcaaaacctggcccaaaaccagctctaaaaccaggtccaaaaccaggacctaag
cctggaaccaaacctgcagatgttttgccccccaccgacactgcacccatcaaggcacca
gtgggtcgccccaaaggctcagtttctaaagcaaagctggtacaacaagtttcttcttcc
cttcaatctttgacaggactgcaaagcaggggcaggggcaagggcagcctaaaagctaca
atatcacaagtaaaccaggatgtaaaaccagtaaaccaggaagaaaaaccatcaaaccat
gaggcaaaggcaccagagaaggagggtaagaacatggtcttgagatccagaaagccctcg
caagaaaaactgtcaaaagaaaaagaaaaagtcataggggaagatattctaccccagaca
ctaacagaaattaaagccagtgatgtttctccaaaagtagaggaggctgttactgtggaa
caaactctaactcccattcctaatgcagtcaaaaacacagatgtcccagcagacccacct
gcaccacttgccccaccagtcccaactgaacaatctgaagaaaagacatcacttccacta
aaacggaaacctagcccagaactttcttcaatggcagtaaagaaaaaaaggggtccaaag
cccaagccaaaacccttaccacctcaacccccattgctggaggttgtcgctatgcctaaa
gagaagggtgtccggggccccaaaagaaagcgagggccacctaagagagcctctgtggtc
actcccccacccaaagacactccttccaacatcagtgaaactgacatcactagtgatgtg
cctgtggtgcctcctcagtgccccactaaaacaaaagttctcccaccacgcaaaggcaga
ggacagaaatatgaggccatggtgcagaaaattacatctcctagctcgaagaaacaccta
ccaattccccagatagacagcaatctaactgatgatgtgacaaccaaggctttgtctcaa
catgtcttaaaggaaggtgagacgtctatgctcataaatagcactgagatgatagaggga
gaagtgaaaagcatagagtctagacaagaaggagcaaaacaacagagaaaagaggagatg
atgcaagaaaaagaaaagcatgaggttagtcaaaaggaatcaatgccagaagaggtgaga
caatgggtggaagaagagattgtaaataaggagacacgacaggaaaacattaaaccaggc
acaaagcaggatgttggagctgacaaggtttggagcacaatgggaaccccagtagaagtc
agggctccaggaaagtggacacaacaggcctcagaaggtgtatcttctgctgccactaag
tctgcaagaactaaaaggaagagatgggccatggtggagagtacagatgcctcagtagta
gccttggaggctgggagcctaatagttacaacaccaaggctagccaaacagagggccatt
aaaaacaaccatgagatgcacctaaagcagaggaggaagaagagaaaaggccaagcccct
ctagaagaaacagagacagtcgaggagccaaatattgaaacagcagaacaacaacaggag
agggtagaagagaaggtaacccccacagagtccatagtacctctgccaatcagcccacat
gagatcacaataaccccccaggttaccagcacagaactcatccagaaacctaggagaggc
agaaaaccatcagcaaatccaaccaagaggaaacgaggcaaagtctcatcagagcagatt
cctggcaagccactgaaggtccacaaaaagcctgggccaaaacctgggatgaaagacgcc
attgaggttattgaggcagtagtaagggctgcaggatgtgaacgggccgaaaaagaggag
agagaaaaagaagaaagagaaagagaaaatagggaaaaacagaagacatgtattgtgggt
ccggtagtgacaatatcagaaaaacagactgagacgatttctgtgaaaagaatcaggcgc
aaaccagtccatcaaaattctaaactgtctttctgtccttatgtacggattaacaactcc
agagacttttcctcttggtgtgccatagtcaacaagcctgaggatgcagtaatatttcag
agacgtagaaaaaagggcatactcagaatgaggaatcctttcacagttgcaaaggtagtg
ccacacactgctgccatgctaaagggacccttggtgaataaaaatctaattgacaggtgt
cttacatgtagcctgtgtggaaagccagcaaattacagagacctgggtgatttgtgtgga
ccctactacacagaggatggcgttccgcggaaaattttgacaatcaggcacacagaatcc
ctcagggaagagtcagagaagaccaatgacaacaacagtagcagcactgaagaaccaggc
aactcctcaaagaatgagggcaaggtcagcacagaaaaggagggcaatacagaagcatcc
actcaagaaggcagtagtggcaggcaccatcattggcgctaccgacgggcagaaagaacc
gaaagaatgggtcaggagggtggtccacgaagattaactctcagagagaggttcaggagg
atgaagcagctccaggccatcagcacaggggcctcaagtgaccaagagggcagtaacagc
atgttccaaaggctacaagtggaggcagaggctaaggagcactgggcccatgaaaactgt
gccatctggaccaagggggtaattatggtagctgggaggctatacggactgaaagaggct
gccaacaactcagcccaaacgagttgctacaagtgccagattgtgggggcgtccctcagc
tgctgttggagaggctgctctcataaataccactatgtctgcgccaaagagataggctgc
acattccacgaggatgacttctccatcaaatgtcctaaacatgaggacgtgtaa
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