Siniperca chuatsi (mandarin fish): 122868594
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Entry
122868594 CDS
T08948
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04020
Calcium signaling pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122868594
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122868594
04082 Neuroactive ligand signaling
122868594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122868594
Ion channels [BR:
schu04040
]
Ligand-gated channels
Glutamate (ionotropic)
122868594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
122868594
NCBI-ProteinID:
XP_044036624
LinkDB
All DBs
Position
LG21:16921399..17054164
Genome browser
AA seq
1716 aa
AA seq
DB search
MRHWLAKHKVLLSHSSTMPVCGCRSPSPPRGQAGASSSAPSVAQERLVRPLHPPPPPSLH
RRTSASLCLSLLLLLLCLLHLPPACHSRREKGGGGGGGHYIPIPQPPPHHMALPNILRGL
SIAVVLVGNSSEVALAGAREKDDFLHMAPNVEVLTMNETDPKSIIKSICDLMTEHWLQGV
VFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSMIMAAKDDNSMFFQFGPSIEQQASVM
LNIMEEYDWYIFSIVTTYYPGYQDFVTKIRSTIENSFVGWELEEVLLLDMSVDDGDSKIQ
NQLKKLQSPVILLYCTKEEANTIFEVAHSVGITGYGYTWIVPSLVAGDTVVVPAEFPTGL
LSVSYDEWDYGLEARVRDGVAIITMATSTMMMDRGPHTLLKSECHGAPDKKSPISGNPNE
VLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKERQWDRVGKWENGSLSMKYHVWPRY
ELYGGAANREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQIKTLNQTKESGIY
IKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGS
LTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSAM
AVFIFEYFSPVGYNRCLADGKEPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMV
SVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQSPNDFSPPFRFGTVPNGSTE
RNIRNNYPEMHSYMTKFHQRNVNEALQSLKAGKLDAFIYDAAVLNYMAGRDEGCKLVTIG
SGYIFATTGYGIAIQKESLWKRHVDLAILQLFGDGEMEELESLWLTGICHHEKNEVMSSQ
LDVDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGVCSGQPGFVFSISRGIYSCI
HGVQIEEKSSSALNSPSATMNNTHSNIMRLLRTAKNMASLSGVNGSPHSALDFIRRESSV
YDISEHRRSLAGHSDCKPSYLPDDNMFSDYISEVERTFGNLHLKDSNLYQDHYLHHHGST
LGLSGPPPNRPHSLGSASSLEGGMFDCDSLGGGVAPIFTTQPCSALTHRNMSKFDLLSGQ
TPPSGQSFKGGLPDLYGKFSFKGGASSSTYIPGHNYCAGRGDDDGNIRSDVSDISTHTVT
YGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIELGYRRKPYHISHHHYHGHRSTSPPL
LPSERKRGGGGGGGNNDGNSYVFREKESVRDFYLDQFRPKEGVPQWEHVDLTEGPVTRDG
GVGTCTSLVPVDDFLKSKPKKSDSKSGGGSGLAGGEWECRNCRASSGGGGKQMSMHGGGG
GGYGGGISCGSSGGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQMGGGKGGGGG
GGMGAGPQPQGQQRRKGGLGKPLRRQHSYDTFVDLQKEESGGMGSLMGGLGGGGGISGTG
MGGMLPPPRSVSLKEKERYMEGTSPFAHIFERHGGSERERERDRDPLFYGDESRKGPGSP
FGLFRGGDGLHRRSIGERDMRDRDRSLMEGGGGGAFSLSKSLYPDRVNQNPFIPTFGDDQ
CLMHGAKQYYMKKQQQQQQVAKNSRSDFRGQMSTASYLPASATAGVMSNVTPRFPKELSL
GGMNHHGSMLGVGPPRPFNGSNGHVYEKLSSIESDV
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgagacattggctggcaaaacacaaggtattactctcccactcctccaccatgcctgtc
tgcggctgccgcagcccctccccacctcgtggccaagccggggcctcctcttccgccccc
tcggtagcacaggagaggctagtccgacccctacatccacccccgcctccatcgctccac
cgccgcaccagcgcctctctctgcctctccctccttctcctgttgctctgccttctccac
ctgcccccggcctgccactcacggagagagaagggcgggggaggcggtggcggccactac
atccccatcccccagccccctccccaccacatggccctgcccaacatcctgcgtggcctc
agcatcgccgttgttctagtgggcaactccagtgaggtggcgctggccggggctcgggag
aaggacgacttcctccacatggcgcccaacgtggaggtgctgaccatgaatgagacggac
cctaaaagcatcattaagagcatctgtgacctaatgacagagcactggctgcagggcgtg
gtgtttggggatgacaccgaccaggaggccattgcccaaatccttgacttcatttcagcc
cagacccatatccccatcctcggagtccgcgggggctcctccatgatcatggctgccaag
gatgacaactccatgttctttcaatttggcccctccatcgagcagcaggcttcggtcatg
ctaaacatcatggaggaatacgactggtacatcttctccatcgtcaccacgtactacccg
ggttaccaggactttgtcaccaagatccgtagcaccatcgagaacagctttgtgggctgg
gaactggaggaagttttactacttgacatgtccgtagatgatggagattcgaagatccaa
aaccagctgaaaaagctccagagccccgtcattcttctctactgcacaaaagaagaggcc
aacaccatcttcgaggtcgcccactctgttgggatcactggctacggctacacatggata
gtgccctcgctggtagctggcgacactgttgtagtgcctgcagagttccccacaggtctg
ctctctgtgtcctatgacgagtgggactacggcctagaggcccgtgttcgagacggcgtg
gcgatcatcacaatggcaacctccaccatgatgatggaccgcggacctcacaccctgttg
aagtctgagtgccatggagctcctgacaagaagtctcccatctcaggcaaccccaacgaa
gtgctcaggtacctgatgaatgtgacgtttgaggggcgtaatctgtcattcagcgaggac
ggataccagatgcaccccaagctggtcatcattctgctcaacaaggagagacagtgggac
agggtgggtaagtgggagaatggttccctgtccatgaagtaccatgtgtggcctcgctat
gaactatatgggggggcagcaaacagggaggatgaccacctgtccattgtgacattggag
gaggctccgttcgttattgtggaagacgtggatccgctaagcgggacctgtatgagaaac
actgtaccctgccggaaacagatcaaaacacttaatcagacgaaggagtcgggaatctac
ataaagcgttgctgtaagggtttctgcattgacatcctgaagaagattgccaagacggtc
aagttcacctacgacctttacctggtcactaatggcaaacatggcaagaagatcaatgga
acatggaatggcatggtgggagaggtggtgttaaaaaacgcccacatggccgtcggctcc
ttgaccatcaacgaggagaggtcagaagtcatcgacttttccgtacccttcattgagacg
ggcatcagcgtcatggtctcccgtagcaacggcaccgtttcgccctctgccttcttagag
cccttcagtgcggatgtgtgggtgatgatgttcgtgatgctgttgctggtgtcagcaatg
gctgtgtttatattcgagtacttcagccctgtgggctacaaccgctgtctggctgacggc
aaagagcctcatggtccatccttcaccatcggtaaggccatctggctgctgtggggtctg
gtctttaataactccgtgccggtgcagaaccccaaaggcaccaccagtaagatcatggtg
tcagtgtgggccttctttgctgtcatcttcttggcctcctacactgccaacctggctgct
ttcatgatccaggaggaatatgtggaccaggtaactggtctctcagacaaaaagttccag
agtcccaacgacttctcgcctccgtttcggtttggcaccgtcccaaatggaagtacagag
agaaacattaggaacaactatccagaaatgcactcctacatgacgaagttccatcagaga
aatgtcaatgaggctttgcagagtctcaaggccggcaaactagacgctttcatttatgat
gcggccgtactgaactacatggctggcagggacgagggctgcaagctggtgaccattggc
agcggctacatctttgccaccacagggtatggcattgccatccagaaggagtcgctctgg
aagagacatgtggacctggccatcctgcagctctttggagacggtgagatggaggagctg
gagtccctgtggctgacagggatctgccaccatgagaagaacgaggtgatgtccagtcaa
ctggatgtggacaacatggccggtgtcttctacatgctcggtgccgccatggctctgtcg
ctcattaccttcatctgcgaacactggttctactggcagctgcgcttctgcttcatgggc
gtctgctccggccagcccggcttcgtcttctccatcagcaggggcatctacagctgtatc
catggggtgcagattgaggagaagagcagctcggcattgaactcaccatcagccaccatg
aacaacacccattccaacattatgcgcctcttacgcaccgccaagaacatggcctccctg
tcaggggtgaacggctcaccacacagcgctctggacttcatccgccgtgaatcctctgtt
tatgacatctctgaacaccggcgcagcttggcgggccactcagactgcaagccatcttac
ctaccagacgacaacatgttcagcgactacatcagtgaggtggagaggacgtttggcaac
ctccacctgaaggacagtaatctgtaccaagaccactacctgcaccaccatggctcaacg
ctagggctcagtggacctcctcccaacaggccccatagtttgggcagtgctagttctctg
gagggcggcatgttcgactgtgacagcctgggtggaggggtggcccctattttcaccacc
cagccctgctcagcactgacccacagaaacatgagcaagtttgacctgctgtctggacag
actcctccctcaggtcagagctttaagggaggcctgccggacctgtacgggaagttctcc
ttcaagggaggtgcctcaagttccacatacatccctgggcataactactgtgcagggaga
ggtgatgacgatgggaatatacgttcagatgtctcggacatttccacgcacacagtaact
tatggaaacctggagggtaatgccaagaagcgcaaacaataccgtgatagcctgaaaaag
aggccggcctctgccaagtccagacgggagctggacgagattgagctgggctacaggagg
aaaccctaccacatcagccaccaccactaccatggccaccgctctacctccccaccgctt
ttgccctctgaacggaagagagggggaggaggtggaggaggaaacaacgatggaaactcc
tatgtcttcagagaaaaggagagcgttagggatttttatttggaccagtttcggcccaaa
gagggcgtgcctcagtgggaacatgtggatctgacagagggccctgtgactagagatgga
ggagtggggacctgcacctccctagttccagtggacgactttcttaagagcaaacccaaa
aagtcagattcaaagagtgggggaggatctgggctggcagggggcgagtgggagtgcagg
aactgtcgggctagcagcggaggagggggcaagcagatgtccatgcatggagggggtggt
ggagggtatggtggtggtattagttgcgggtcatcgggaggcggaggaaacagccgcccc
agctctgcaacctgcatgcgctgcgagggctgtaaaaagacaggaaacctctacgatatc
agcgaggacaataaccacctcttggaacagatggggggagggaaaggtgggggaggtgga
ggaggtatgggcgctggccctcaaccgcagggccagcagaggaggaagggtggattaggc
aaaccacttaggcggcagcactcatatgacacatttgtcgaccttcagaaagaggagtca
ggtgggatgggaagtttgatggggggtctaggaggaggtggagggataagtggtacaggt
atgggagggatgctacccccacccaggagtgttagcttgaaggagaaagaacgctatatg
gagggcaccagccccttcgcacacatatttgagcgtcatgggggctccgagagagaaagg
gaaagagacagggacccactgttttacggagatgagagccggaaaggacctggctcacca
ttcggcctgttcagaggcggtgatggcctccaccgccgctccattggagagagagacatg
agagacagggataggtctttgatggaaggaggaggtgggggagcattctctttatccaaa
tctctttaccctgaccgggtaaaccaaaacccctttatacctacctttggtgatgaccag
tgtctgatgcatggagccaaacaatattacatgaaaaagcaacagcagcagcaacaagtt
gccaaaaacagccgaagtgacttcaggggccagatgagcacggcgtcttatctgccagca
tctgccacggccggggtgatgtccaatgtcaccccccggttcccgaaagagctcagcctt
ggtggaatgaaccaccatggctccatgctgggggtcggccccccgcgtcccttcaatgga
agcaatggccatgtgtacgagaaactctccagcattgagtctgacgtgtga
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