Siniperca chuatsi (mandarin fish): 122868639
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Entry
122868639 CDS
T08948
Symbol
lmx1al
Name
(RefSeq) LIM homeobox transcription factor 1-alpha isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122868639 (lmx1al)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
122868639 (lmx1al)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
122868639
NCBI-ProteinID:
XP_044036718
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Position
LG21:complement(10065061..10083162)
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AA seq
422 aa
AA seq
DB search
MLPTEISGGVCFTSSDHTEGRREGMKTEESQQSCLQQPPSSTPFDGFLERVNISLWGPEY
RGGGEVCAGCESPIADRFLLRVNERSWHETCVKCAVCLSALTGTCYCRDRLLYCKHDYEK
LFVRKCSACLQVIGRTELIMRVQGQVYHLGCFTCCECERRLQRGDEFVLKEGQLLCRMDY
EKEREMLAAISPTPTESVKSEDEDGGGGSGGGKGGDEGKEHKRSKRPRTILTTQQRRAFK
ASFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQQEQEQLG
GTRRGPSRGGRQSNDDSEDGSSTHGMDGILGYPSLPRQQLLALDPNIYGGEPFRHGLTPP
QLNNEQLHSYDSETVFHDLDSDGSLGHLGDCLLATGDGSLLPGRVGNPIDRLYSMQNSYF
TS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaaccgagatttcaggaggagtgtgtttcacctcaagcgatcacactgaggga
aggagagaagggatgaaaacagaggaaagccagcagtcctgtctgcagcagcctccatcc
tcaacgccttttgatggatttttggagcgagtcaacatttccttgtggggtccggagtac
aggggagggggagaggtgtgtgcgggctgcgagtctcccatcgccgaccgtttcctgctg
cgcgtgaacgagcgctcctggcacgagacctgcgtcaagtgcgcagtgtgtttgagcgcg
ctcaccgggacctgttactgcagggaccgcctgctgtactgcaagcacgactatgaaaag
ctttttgttaggaagtgcagcgcctgcctgcaggtgattggacgtacagagttgataatg
cgcgtgcaaggccaagtgtaccacctgggctgcttcacttgctgtgagtgtgaacgccgg
ctgcaaagaggtgatgagtttgtgctgaaagaaggccagctgctctgccgcatggactat
gagaaggaaagggaaatgctggccgcaattagtcccacaccaactgaatcagtgaaaagt
gaggatgaggatggtggaggaggctctggcggggggaaaggtggtgatgaaggcaaggag
cacaagcgttcaaaacgaccacgcaccatcttgaccacacagcagcgccgtgctttcaag
gcctcctttgaagtgtcagctaagccttgccgcaaggtgagagagacattggctgctgag
actgggctgacagtgcgcgttgtgcaggtgtggtttcaaaaccagagagccaagatgaaa
aagatagcccgccgacagcagcaacagcagcagcagcagcaggaacaagagcagttggga
ggcaccaggagaggaccaagtagagggggccgtcagagcaatgacgacagtgaggatggc
tctagtacccatggcatggatgggatactggggtatccctctctgccacgtcagcagcta
ctcgctctggaccccaacatctacggtggagagccatttcgacatgggcttacaccgcct
cagctgaacaacgagcagctccactcctatgactcagagacagtgttccatgacctggac
agcgatggaagcctcggccaccttggagactgcctcttagcaacaggggacggcagtctc
ctgccagggcgagtgggaaaccccattgaccgtctctactccatgcagaactcctacttc
acctcctga
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