Siniperca chuatsi (mandarin fish): 122868644
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Entry
122868644 CDS
T08948
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00310
Lysine degradation
schu00514
Other types of O-glycan biosynthesis
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122868644 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122868644 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
schu01003
]
122868644 (colgalt1a)
Enzymes [BR:
schu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122868644 (colgalt1a)
Glycosyltransferases [BR:
schu01003
]
O-Glycan biosynthesis
O-linked Gal type
122868644 (colgalt1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
DUF6492
LysX_preATP_grasp
Motif
Other DBs
NCBI-GeneID:
122868644
NCBI-ProteinID:
XP_044036729
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All DBs
Position
LG21:complement(10098582..10106169)
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AA seq
610 aa
AA seq
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MHGFACLPAVPLLLLLSCCSPARGYFAEERWSPESQLLAPRVLVALICRNSEHSLPYFLG
TIERLNYPKDRMALWVATDHNKDNTTAILRDWLVKVQNLYHYVEWRPKEEPRHYGDEDGP
KHWTDLRYEHVMKLRQVALESAREMWADYFMLVDCDNLLTNPNVLWKLMKENKTIIAPML
ESRAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAF
HPPHPEYSWAFDDIIVFAFSARMADVQMFVCNKETYGYFPVPLRSHNTLQDEADSFLHSL
LEVNVRNPPVMPSKYIPVHRKHPDKMGFDEVFMINLQRRTDRRERMLRALYEQEITCKVI
AAVDGKAMNVSEVQAMGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIVERRLQTSL
VIEDDLRFEVFFKRRLKNLMSELEEEGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEADY
SYWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMYNKHPVSDYMEQFETRDLKAFSAE
PLLVYPTHYTGDKGYISDTETSTVWDNDKVQTDWDRAHSGKTGEQAEISTEAQNSDVLQS
PLDSTARDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggttcgcctgcctccccgccgtcccgctgctcttactcctgtcctgctgcagt
cctgcccggggatattttgcggaggagcgctggagccccgagtctcagctcctcgctccc
cgggtcctggtcgcccttatctgcagaaactccgagcactctttgccgtatttcctcggt
actattgagcgcctcaactatcccaaggaccgtatggctctttgggtagcgactgatcat
aacaaggacaacaccacagccattctgcgtgactggcttgtcaaggtgcagaacctttac
cattatgtggagtggaggccaaaagaggaacccagacattatggggatgaagatggtcca
aagcactggacagacctccgttatgagcatgttatgaagcttcggcaagtagcactggag
tccgctcgtgagatgtgggcagactactttatgttggtggactgtgataacctcctcacc
aatcccaatgtgctctggaagctcatgaaagagaataagaccatcattgctccaatgctt
gaatcccgtgcagcttattcaaacttctggtgtggaatgacctcccagggttactataag
cgcacccctgcctacatacccatgaggaagcaggtgcgtaagggctgttttgctgttccc
atggtccactccaccttcctcatagacctcaggaaagaggcgtccaggcagctggctttt
cacccgccacacccagaatacagctgggcttttgatgatatcattgtgtttgccttctct
gctcggatggcagatgttcaaatgtttgtatgtaataaagagacctatggctacttccct
gtgccactgcgatctcataatactttgcaagacgaagctgacagcttcttgcactccctg
ctggaggttaatgtgcgaaatcccccagtgatgccttccaaatacatacctgttcataga
aaacatcctgacaaaatgggctttgatgaggtgttcatgataaacctgcagaggcggact
gaccgcagagaacgtatgctgagggcattatacgagcaggagataacatgtaaggtcatt
gcagctgtagatggaaaagcgatgaatgtcagtgaagttcaggctatgggcatccacatg
ctcccaggatacagtgacccctatcatggtcgcccactgacaaagggagagctgggatgc
ttcctttcccactataacatctggaaagagattgtggagcgacgcctgcagacctcactg
gtgattgaagatgacctgcgcttcgaggtcttcttcaaacgtcgcttgaagaacttgatg
agtgagctggaggaggaaggactagactgggatctcatttatattggtcgcaagagaatg
caagtggatcacccagagaaagcagtgccaaatattcacaacttagtggaagcggactat
tcatattggacactaggctatatgatatcattacaaggtgcagagaagcttttgaaagca
gaaccactcaagaggattttgccagtggacgagtttcttcctatcatgtacaataaacac
cctgtgtctgattatatggaacagtttgaaaccagggacctgaaggcattttcagccgag
cctcttctagtgtatccaacacattacacgggcgacaaaggctacatcagcgacactgaa
acctccacagtgtgggacaatgacaaggtccaaacagactgggacagagcgcactcaggg
aaaactggggagcaggctgagatcagcactgaggcccagaactcagatgtgctccagtca
cctttggacagtacagcacgggacgagctatga
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