Siniperca chuatsi (mandarin fish): 122868794
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Entry
122868794 CDS
T08948
Symbol
stx18
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04130
SNARE interactions in vesicular transport
schu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122868794 (stx18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122868794 (stx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122868794 (stx18)
Membrane trafficking [BR:
schu04131
]
SNARE
Syntaxin (Qa)
Stx-rER
122868794 (stx18)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF4559
DUF7165
GLTP
DUF6279
DUF2120
Motif
Other DBs
NCBI-GeneID:
122868794
NCBI-ProteinID:
XP_044037027
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Position
LG2:23071674..23088925
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AA seq
345 aa
AA seq
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MTSSLGDVSVCLQRSLLCSCTGMAVDITLLFKASVKTVKTRNKAIGIGFDSTKDDIFKRS
RPKSGFSPKAKEVVTNITKLKDFLLQHRKDYVSVGSLISSDLTRMTDNERDQIDQDAQIF
MRTCSEAIKQLRNEAAKQVTSAQIKEHRGAVLDLIEMYLRGVCKLYSEQRAIRVKRMVDK
KRLSRLAPENHNRVERKPEVELLEEKTVKEESSEKSVSEVLGNPVNPWEEGRVEDELSPE
EIQMFEQENQRLVSEMNSLVDEVRQIEGKVVEISRLQEIFAEKVLQQETEIDSIHQLVVG
ATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctcacttggtgacgtgtcagtttgtttacagcggtccctgctctgcagctgc
acaggcatggctgtggatataactttacttttcaaagccagtgtcaagacagtaaaaacc
aggaacaaggcgataggaatcggctttgactctaccaaagatgacattttcaagaggagc
agacccaagagtggcttctctccgaaggcgaaagaagtggtcacgaacatcaccaagctc
aaagactttctgttacaacacaggaaagattatgtgagcgtcggaagtctcatctcatcg
gatcttacccgtatgacggacaatgagcgagaccagattgaccaggatgctcagatcttc
atgaggacctgttctgaggccatcaagcagctacgcaatgaagcagcgaagcaggtgaca
tcagcccaaataaaggagcacagaggggcagtgttggacctcattgaaatgtatctaaga
ggagtatgtaagctgtactctgagcagcgagcaatcagagtcaagagaatggtggacaag
aagaggctgtcaagactggcaccagagaaccacaatcgggtggagagaaagccagaggtg
gagctcttggaggagaagactgtcaaggaggaaagctctgagaagagtgtgtcagaggtc
ctgggcaaccctgtcaacccgtgggaggagggccgagtggaggacgagctctctcccgag
gagatccagatgtttgagcaggaaaaccagaggttggtgagtgagatgaacagcctggtg
gatgaagtgaggcaaatcgaggggaaggtggtggagatctcccgactgcaagagatcttt
gctgagaaagtcctgcaacaagaaacagagatagacagtattcatcagctggttgtgggt
gctacagaaaacgtcaaagaaggcaatgaggatatacgagaggccatcaaaaacaatgct
ggcttccgtgtatggatcctgttcttcctggtcatgtgctctttctctctcctcttcctg
gactggtatgacagctaa
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