Siniperca chuatsi (mandarin fish): 122868869
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Entry
122868869 CDS
T08948
Symbol
ush1ga
Name
(RefSeq) Usher syndrome type-1G protein homolog isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
schu03037
]
122868869 (ush1ga)
Cilium and associated proteins [BR:
schu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122868869 (ush1ga)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
RGCC
Motif
Other DBs
NCBI-GeneID:
122868869
NCBI-ProteinID:
XP_044037215
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Position
LG21:11319254..11329476
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AA seq
472 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVARGGNPDK
CDIWGNTPLHLAAANGHHNCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDSI
AAKQTGLNPKLVNKLKDRAFREAERRIKECMKMQKKHHKRMERKFHKDASEASASDVMSF
SSYTSSSLSHKLRNLNAATVSVPYSQATLHATNRGKTKIQKKLEKRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTSVNPKDRGHRNIRDMFPRDNYDAISRAMSEPDFHGPDV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFDLGGRDDTSVDQSGNNVRLRSRLQQ
YPSVDEDSIGSARSLQERNVEELPWEEVELGLDDDDEPDTSPLEVFLATQSMSEFFSIFK
REKIDLEALMLCSDRDLKSIHIPLGPRKKILEACKRRLETIEDPDCIVDTEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccacaaggcggcccgggacggctacctggacctgctgaaggaggcg
actcggaaggacctcaatgcgccggatgaggatggcatgacaccgacgttatgggctgct
tatcacggcaacctggaggcactgcggctgatcgtggcgaggggaggaaaccctgacaag
tgtgacatatgggggaacacgccgctccacctggcagctgccaatggtcaccacaactgc
cttttcttcctggtgtctttcggtgccaacatttggtgcctggacaacgactaccacacg
ccgttggacatggctgccacaaagaatcacatggattgcgtccgctacctcgattccatc
gctgccaagcagacaggcctcaaccccaagctggtcaacaagctgaaggaccgggcgttt
cgcgaggctgagcggcgaattaaagagtgcatgaagatgcagaagaaacaccacaaacgc
atggagaggaagtttcataaggacgcttctgaggcttctgcatcagatgtcatgagcttt
tccagttacaccagcagctctcttagccacaagctgcgcaacttaaatgcagccaccgtc
agtgtgccatattctcaggctacgcttcatgccacaaaccgagggaagacaaagattcag
aagaagctggagaagaggaaacaaggagatgggacctttaaaatctacgaggatgggagg
aagagtgtgcgctccctctctggacttcagctgggcaacgatgtcatgtttgtcaaacaa
gggacttccgtcaacccgaaggaccgtggccaccgcaacattcgtgacatgttccccaga
gacaattacgacgccatttcacgtgccatgagcgagccggacttccatgggcccgatgtg
gactattctgagatcagcacagactcaggacatgattccctgttcaaccggcctggtctg
ggcaccatggtttttaggaggaactatgtgagtggggggatgtttgaccttggtggtcgg
gacgacaccagtgtggaccagtcaggcaataatgtgcgtttacgcagtcggctgcagcag
tacccgagtgtagatgaagacagcatcggcagtgcacgcagcctgcaggagaggaacgtg
gaggagctgccctgggaagaagtcgaattagggctggacgatgatgatgagcctgacacg
agccctctggaggtcttcctcgccacacagagcatgagtgagtttttctccatcttcaag
agggagaagatcgaccttgaagcattgatgctgtgctctgatcgtgaccttaagagtatc
catatccccttaggaccaaggaagaaaatcttagaggcctgtaagagacggctggagacc
atagaagacccagactgcatcgtggatacagaattgtga
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