Siniperca chuatsi (mandarin fish): 122869156
Help
Entry
122869156 CDS
T08948
Name
(RefSeq) integrin alpha-3-like isoform X1
KO
K06482
integrin alpha 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04810
Regulation of actin cytoskeleton
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122869156
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122869156
09142 Cell motility
04820 Cytoskeleton in muscle cells
122869156
04810 Regulation of actin cytoskeleton
122869156
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122869156
04515 Cell adhesion molecules [BR:
schu04515
]
122869156
04090 CD molecules [BR:
schu04090
]
122869156
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122869156
Cell adhesion molecules [BR:
schu04515
]
Integrins
Integrin alpha subunits
122869156
CD molecules [BR:
schu04090
]
Proteins
122869156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Collectrin
Motif
Other DBs
NCBI-GeneID:
122869156
NCBI-ProteinID:
XP_044037791
LinkDB
All DBs
Position
LG21:296342..323490
Genome browser
AA seq
1069 aa
AA seq
DB search
MATGVCVMLSVWVGVCVASNLDTSFPLLKTGGDGSLFGLSVALHQDLKTDSYLLLVGAPR
ERAEPNVPANRTGGVYSCPITADQSDCSRMKLIDPDLNLSEDLIEDMWLGVSVASQGRPG
GRVLACGHRFVKLYGAFNLRHMIGRCYLRGNDLQYNDTDMHWQNPDQPCSHLGDVSSEVM
CNMGISASITQTEIIVGSPGSYEWQGNVHVSWMNPDVDFDTQRSSFPNLQHRNIYIGYSV
TQARRLLSRDDETIVTGAPKDSKEDARGSVLLAVKQFDKLMTQQTLRGEQMGSYFGNAVA
TTDLNNDGWNDLLVGAPFYFHRQQEAGGAVYVYMNAGGRFDSRPSVVLRGPAGSAFGMSV
TAAGDLNQDGFQDFAVGAPFHETGSVMIWTGSSEGVSTEPSQVIRGSTVSSGFRTFGYSM
SGGVDVDGNKYPDLLVGSLDDTVALLRTRPVVHLNKTLRVSPDVVDPNSCDLCIQVEVCF
SYIFSTGEKHDRDNITVHFTVTADVTSPEPRLHFRDNGQSVYSGYLSMPKKQCETLRVRL
LSPIRYKVEPLVFSLNVSLYEKLLKKRNDVQDLKRFPVLSQTPRPIKTQIHIQKACGSDN
RCHSNLQMAAQFTDENQKPFPMQKDSQVLYYNGSINRLFLEVNVSNTPSPGRPAEDAHNA
ALNISIPPLLIYSGVRTKGDIQAMVHCSVEDSVLLCELGNPFKRNQKGQVLIIFQLDENS
LDTREIQSLLQLSTLSEQSDLSPVSVSMLMEYSLQTSLTLINPPGPTSFSGHVIGESAME
KTEDVGSLLLFTLQVHNNGKPLGRLGNLQVEFDWPMEVSNGKWLLYLAEIEVNGTSEPRC
APPGNLINPLDLMLSKEETKKKRSLEEEVKGNEEEQIEKILPVFHLQGQKKKSYTLDCAH
GANCVTFICPLVNMRNSATLTVRARLWNSTMIEDYSDARSVLVRVQATLKLQTNKPTINM
ESHSTEIEVHIYPEPGQQVDASTPLWIILVSVLAGVLLLALICLLLWKCGFFVRRRAWRA
AAFHQGRIMGKDKQQQHTDADGFLIQNDVSSSRNRKSPKHWVTSWTETH
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggtgtgtgtgtgatgctgagtgtgtgggtcggtgtgtgcgttgcatctaac
ctcgacacgtcgttcccgctgctgaagacgggcggagatggaagtctgttcggactgtct
gtcgctctgcaccaagacctgaagacagacagttacctgctattggtcggagctcccagg
gagagggcggagcctaatgttccagccaatcgaacagggggagtgtacagctgcccgatc
accgctgaccaatcagactgcagcaggatgaagctcatagacccagacctgaacctgtct
gaggacctcattgaggacatgtggttgggcgtctcagtagccagtcagggccgacctggg
gggagggtcctggcgtgtggtcatcgcttcgttaaactctatggagcgttcaatctcaga
cacatgattggccggtgttatctccgtggaaacgacctgcagtacaacgacacagacatg
cactggcagaaccccgaccagccctgcagtcacctgggtgatgtcagcagtgaggtcatg
tgtaacatggggatttctgcctccatcactcagacagaaatcattgtcggctcacctgga
agctacgaatggcaaggaaacgtccatgtctcctggatgaatccagatgttgacttcgac
acccagaggagctccttccccaacctgcagcacagaaacatttatataggatattcggtc
actcaggctcgacgtcttctttctcgggatgatgaaaccatagtaacaggagctcctaag
gacagtaaagaagatgctcgtggctccgtgctgttggcggtgaaacagtttgataaactg
atgactcagcagactctgcgcggtgaacagatgggctcctacttcggtaacgccgtggca
accaccgacctcaacaacgacgggtggaacgacctgctggtgggcgctcctttttatttc
catcgccagcaggaagcgggcggggcagtttatgtttacatgaatgcaggaggtcggttt
gattctcggcccagtgtggtgctgagaggaccggctggatcggcgttcggcatgtctgtc
actgccgccggagacctgaaccaagatggcttccaggactttgcagtcggagctcctttc
catgaaacaggaagtgtgatgatctggaccggcagcagcgagggggtctctacagaaccg
agccaggtgatccggggcagcacggtctcttctgggttcaggactttcgggtactctatg
tctggaggtgtggatgttgatgggaacaaatatccagacctgctggtcggctctctggac
gacaccgtcgctctgctcagaactcgtccagtcgttcacctcaataaaaccctcagagtt
tctccggacgtcgtcgacccgaacagctgtgacttatgtattcaggtggaggtgtgtttc
tcctacatcttcagcaccggagagaagcacgacagagacaacatcactgtccacttcact
gtgaccgctgacgtcaccagccccgagccccgcctccatttccgtgacaacgggcagagc
gtgtactctggttacctgtcgatgccgaaaaaacaatgtgaaaccctgagagtcagactg
ctgagtccaatccggtacaaagtggaacctttggtattctcactgaacgtctctctgtac
gagaagcttcttaagaaaagaaatgacgtacaggacctgaaacgctttcctgtgctgagc
cagacaccccgacctatcaagacccagatccacatccagaaggcctgtggttctgataac
cgttgccatagtaacctgcagatggccgcccagttcacagatgagaaccagaaacccttc
cccatgcagaaggacagtcaggtgttgtactacaacggcagcattaaccgattgtttctg
gaggttaatgtcagcaacacaccgtcaccgggccgaccagcagaggatgctcacaatgct
gctttgaacattagcatcccaccgttgctcatatactccggagtccgaacgaagggtgac
atccaggcaatggtgcattgttctgttgaggactctgttcttctgtgtgagctggggaac
ccattcaaaaggaaccagaagggtcaggtgttgatcatatttcagctggatgagaacagt
ttagacaccagagagattcagtctctgctacagctgtccaccctcagtgagcagtcagac
ctgtctcctgtctctgtctccatgttgatggagtattcactgcagacatctctcactcta
atcaatccgccaggccccacctccttcagtggtcatgtgattggtgagtcagccatggag
aagacagaggatgtcggcagtctgctgctcttcactttgcaggtgcacaacaacgggaag
ccactgggtcgcctaggcaacctgcaggtggagtttgattggccgatggaggtgtccaat
gggaagtggctgctgtaccttgcagagattgaagtgaacggcacatcagaacctcgctgt
gctccgcccggcaacctcatcaaccccctcgacctcatgctgtcaaaggaggagacgaag
aagaagaggagtctggaggaggaggtgaaggggaacgaggaggagcagatagaaaaaatt
ctacccgtcttccacctgcagggacagaaaaagaagtcctacactctggactgtgcgcat
ggggctaactgtgtgacgttcatctgtccgctggtcaacatgagaaactcagcgactctg
actgtcagagccagattgtggaactccaccatgatcgaggactacagcgatgcgaggagt
gtgttggttcgagtccaggcgactctgaagctgcagactaacaaaccgaccatcaacatg
gagtctcacagcacagagattgaggtccatatttatccagagccggggcagcaggtggac
gccagcacccccctgtggatcatcctggtgtctgtcctggctggagtcttactgctggct
ctgatctgcctgctgctctggaagtgtggtttctttgtgcgtcggagggcgtggcgggct
gcggcgttccaccaggggaggattatgggtaaagacaagcagcagcagcatacggacgct
gacggtttcctgatccaaaacgacgtctcctcgtccagaaacaggaagtcacccaaacac
tgggtcacctcctggactgagacacactga
DBGET
integrated database retrieval system
