Siniperca chuatsi (mandarin fish): 122869158
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Entry
122869158 CDS
T08948
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122869158 (chd5)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122869158 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
122869158
NCBI-ProteinID:
XP_044037800
LinkDB
All DBs
Position
LG2:7667495..7706004
Genome browser
AA seq
2003 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERNTVPLTPLDSFFSDDSLKQQKKKKPKKMKE
GKMPKVKKRKKEGGIQARVDSDLEETSEVEEERERPEIGSESESSTYGPTKKKKKKPKEK
KEKKPRKKKRDEEDEEDDDDDGNMKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQ
PTSVSGSQPSSQLGPIKKAKTKEGKGPGVRKRSKTVKEVKKKPKPKKTKSKSGQSGKKKK
ASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEDEEEA
PGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQKILHWTWGEPPLPAELPVGPDGKPTDPLTKPPLKGHPEREFFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEEINSEKRKSKDPQYAVMEERFYRYGI
KPEWMVIHRIVNHSYDKDGDVHYLIKWRDLPYDQCTWEVDDFDIPEYDSHKPSYWDHREQ
ILGEDQRPLVVRKGKKLKEDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYE
LITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELF
HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI
VRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP
VLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKY
ERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHND
IQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQ
ELDDILKFGTEELFKDEMEAARTMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEIQ
NMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLK
NEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE
REFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVN
GKLSSPDLIPIGMELKKLTESLSSDPNTPVPASPVATQPGTPVPPEKTESLLGTAEDKET
TEQDSKKLSEQETSSAEPSSVPEKAADSEESKASSEEKTGDERDRTESPSTKTEPSANPK
EFALKQTELSSSQTSPKMNACKETEKSSEKGDSDFPLAKTEDKENKPAVTDDVKSEDALE
GRLNGDKDTLDEMEECRKEDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDI
WHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEIHKGNYLEMKNKFLARRFKL
LEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFTEVECLAESHQHLSKESLAGNKPANA
VLHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQP
FSQGGFGCSQMYSSSFGGGFRGAGGQPMVNYSQMPLGPYVSVSSNGPPPPTSHLDKKSLD
SFRDAATPDLKSGKPSDVICIED
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagcaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagatgaggatgacgaaggtgagcgcaacactgttcccctcacacccctcgacagc
ttcttctctgacgactctctcaaacaacaaaagaagaagaagcccaaaaagatgaaagag
gggaaaatgcccaaagttaagaagaggaaaaaggagggaggaatccaggcaagagttgac
agcgacctggaggagacctcagaggtggaggaggaacgggaacgtccagaaataggctct
gagagtgagagcagcacgtacggcccaaccaaaaagaagaagaagaaaccgaaggagaag
aaagagaagaagcccaggaagaagaagagagatgaggaagatgaggaagatgacgatgat
gacgggaacatgaaagaacccaagtcatccagccagttgatgcaagagtggggtctcgaa
gatgttcagtatggcttcaccgaggacgactataaaaccatcactaactacaaggctttc
agccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtcaaagatg
atgacagtgttaggggccaagtggcgagagttcagtgccaacaacccgttcaaaggcgca
tctgccaccgctgtggccgccgctgtggctgccgctgtggaaacggttaccgtggcacag
ccaacgtctgtcagcggcagccaaccgagctctcagctggggccaatcaaaaaagccaaa
accaaagagggaaagggaccaggagttagaaagagaagcaagactgtgaaggaggtgaag
aagaaacccaagccgaagaagaccaaatcaaagtcgggccaaagtgggaagaagaagaaa
gcatcctctagtgaggaggacttcctggaggagtcagactttgatgacatcagcatccac
agtgcctctgtgctttctgatacctcgggggctgccaccaagaaaaaggcccgacgtggg
cggaaaaaaaggaaaaaggaagatggtgatggttatgagacagaccaccaggactactgt
gaggtttgccagcagggtggagagatcatcctgtgtgacacctgtcccagagcataccac
ctggtctgtctggaccctgaactggagaaggcccccgagggcaaatggagctgtccacac
tgtgagaaagagggtatccagtgggaggccaaagatgaggaggaggatgaggaagaggcc
ccaggagaggaagaggatgaccacatggagttttgcagagtgtgtaaagatggaggagag
ctgctgtgttgtgacacctgtccatcttcgtatcacatccactgcctcaacccgcctctc
ccagagatacccaacggggagtggttgtgtccacgctgcatgtgccctcccctcaaaggt
aaggtccaaaagattctgcactggacatggggagaacccccgttaccagcagaactgcct
gtaggccctgatggcaaacccactgatccactgaccaagcctccactcaagggccaccca
gagagggagttcttcgtaaagtgggctggcctttcgtactggcactgctcctgggtcagc
gagctgcagttggagctgtatcatacggtcatgtatcggaactaccaacgtaagaacgac
atggacgaacctccaccatatgactatggctccggagaggaggagatcaacagtgagaag
aggaagagcaaagacccccagtatgctgtgatggaggagcgcttctaccgctatggcatt
aaaccagagtggatggttatccaccggatagtcaaccacagttatgataaggatggcgat
gtgcattacctgatcaagtggagagacctgccctatgaccagtgtacctgggaggtggat
gattttgacatcccagaatatgacagtcataaaccttcgtactgggaccacagggagcaa
atactaggggaggaccaacgccctctggtggtgaggaaaggaaagaagctcaaagaggac
catccaaagagggaggtccctcctgatgctcccatcatagatccaaccatcaagtttgag
caccagccgtggtacattaacgccactgggggaacactgcacccataccagctggaaggc
ctgaactggttgaggttctcctgggcacagggcacagacaccatcctagctgatgagatg
ggcctcggaaagacggtgcagacaatagtgtttctctactcactctataaggagggtcac
tctaaggggcccttcttggtgagtgcgcccctctccactatcatcaattgggagagggaa
tttgagatgtgggctccagatttctacgtggtgacatacactggagacaaagacagccgg
gcaatcatcagggagaacgagttcacctttgaagacagtgcagtaaaatcaggacgcaag
gtgtttcgtatgaagaaagacactcctatcaagttccacgtgctgctgacatcctatgag
ctgatcactatagatcaagctattctgggctccatcacatgggcctgcctggtggtagac
gaggcccacagactgaagaacaaccaatcaaagtttttcagaattctcaacgggtataag
atttactacaaactgctgctcactgggactcctcttcagaacaacctggaagagctgttc
cacctgcttaacttcctcaccccagagcgcttcaataacctggaaggcttcctggaggag
tttgctgatatctctaaggaggaccagatcaagaagctccacgacctgcttggccctcat
atgctcagaaggctgaaagctgatgtcttcaagaacatgcctgcaaagacagagttgatt
gtcagagtggagctcagccccatgcagaagaaatattacaagtttattttgacgcgaaat
tttgaggctctgaactccaaaggtggagggaaccaagtgtccctgctcaacattatgatg
gacctgaagaagtgctgcaaccatccctacctgttccctgtggctgctgtggaagctcct
gtattacccaatggttcatatgatggcaacctactagtgaagtcctcaggaaaactgacg
ctgcttcagaaaatgctgaaaaaactcaaagatgaaggacacagagttctcattttctct
cagatgacaaagatgttggatctgcttgaggattttctggaattcgagggttataaatat
gaacgcattgatggagggattactggaggcctgaggcaggaggccattgaccgcttcaat
gcaccgggcgctcagcagttctgcttcttgctttcaacacgagctggaggtcttggcatc
aaccttgcgagtgcagacactgtcatcatctacgactctgactggaatcctcacaatgac
atccaagcttttagcagagctcaccgtataggccaaaataagaaggtgatgatctatcgt
tttgtgacgcggggctcagtggaggagagaatcactcaggtggcgaaaaggaagatgatg
ctgacccacctggtggtgcggcccggcctgggctccaaaactggctccatgtccaaacaa
gaactggacgatatcctcaagtttggcactgaggagcttttcaaagatgaaatggaagca
gcacgaaccatgggggacaacaaagatggtgaggagggcaatgtgattcactatgatgac
gatgctatctcgaagctgttggaccgcagccaggacgccactgaagacacagagattcag
aacatgaacgagtacctgagctccttcaaagtggctcagtatgtggtgaaagaagaggat
ggagaggaggaggtggagcgggagatcatcaagcaggaggagaacgtggatccagactac
tgggaaaaactccttcgccaccactatgagcagcagcaggaggatctggcccgcaacctc
ggcaaaggcaaacgcatccgaaagcaggtcaactacaacgatacgacccaggaggaccaa
gagtggcaggatgatctttcagacaatcagtcggagtactctgtggggtccgaggacgag
gatgaagatttcgaggagaggcctgaaggtggacgcagacagtctcgtcggcagctgaag
aatgagaaagacaaacctctgccacccttactggcacgagttgggggcagtattgaggtc
ctggggttcaacgctcgccagaggaaagccttcctcaatgcaatcatgcgctggggcatg
cctcctcaggatgctttcaattcccattggctggttagagacttgagagggaagagtgag
cgtgagttcagggcctatgtgtctctgttcatgagacatctatgtgagcctggggcagat
ggagcagagacctttgctgacggagtcccacgtgagggactgtctcgtcagcatgttctt
accaggatcggagtcatgtcccttgtcaggaaaaaggtgcaagagtttgagcatgtaaat
ggaaagctgagttctccagatctgattcccatcggcatggagctgaagaaactgactgag
agtttatcttctgatcccaacacccctgtgccagccagccctgtcgctacacagcctggc
actcccgtcccaccagagaagactgagtctctcttgggtaccgctgaagacaaggagacc
acagagcaagatagcaagaaactgtcagagcaggaaacttccagtgcagagccatcatct
gtacctgagaaggcagctgacagtgaagagagcaaggccagctcagaggagaaaacagga
gatgagagggacagaaccgagtcaccctccacaaagacagagccatctgccaacccaaaa
gagttcgctttgaaacagacagagctgtcatcaagtcaaacctcacctaaaatgaacgct
tgcaaagaaacagagaagtcctcagaaaaaggagattctgattttcctctggcaaaaact
gaagacaaggaaaataagccagctgttacagacgatgtgaagagtgaagatgcattagag
ggccgattgaatggagacaaagacactttggatgagatggaagagtgcaggaaggaggac
aaaaatggattcaaagccaaattcatgtttaatattgctgatggaggttttacagagttg
cacaccctctggcaaactgaagagcgagcggcgctgtcttctggaaagatgcatgacatc
tggcaccgtcgccatgactactggctgttggctggcattgtaacacatggctatgctcgc
tggcaagacattcagaatgacccacgttatgctattctgaatgagcccttcaagactgag
atacataaaggcaactacctagagatgaagaacaagttcctggctcgccgctttaagttg
ttggagcaggctctagtgattgaggagcagttgaggcgggcagcttacctgaatatgacc
caggaccccagtcacccggccatggctctcaacactcgcttcactgaggtggaatgtctg
gcagagtcccaccaacacctgtccaaagagtctctggctgggaacaagcccgccaatgcc
gtgctgcacaaagtgctgaaccagctggaggaacttctgagtgacatgaaagcagatgtg
acacgactgcccaacatgctttccaggatcccgccagtgtcggcccgtctgcagatgtct
gagaggagcatcctgagccgcctcaccagccgagggagcgagcctccaccacagcagcct
tttagccagggggggtttggctgctcccagatgtacagcagcagctttggtggaggattc
agaggagcaggtggacaaccaatggtcaactacagccagatgcctctgggaccctatgtc
agtgtgtcctctaatggccccccaccccctacaagccatctggacaagaagtcacttgac
tcctttagagatgcggctacgcctgacctcaagtcaggcaaacctagtgatgtcatctgt
attgaggactag
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integrated database retrieval system
