Siniperca chuatsi (mandarin fish): 122869168
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Entry
122869168 CDS
T08948
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecule (CAM) interaction
schu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122869168 (lrrc4ba)
04517 IgSF CAM signaling
122869168 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122869168 (lrrc4ba)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
NGL family
122869168 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
122869168
NCBI-ProteinID:
XP_044037813
LinkDB
All DBs
Position
LG21:complement(4554416..4591642)
Genome browser
AA seq
736 aa
AA seq
DB search
MRIATLTCLSGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDEESALVAINETFIRVHSGP
TPSGHLWPEGVPTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTMT
QSGSSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTGSGMGLNN
NNNPSPCSQSQNTSMSCSQVPTATSGGTPTGGTLPSPVPLPQLGLHSSLKGLMGKSQNEP
LLFKSGSKENVQETQI
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgcctttccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagttggtgggagccgcctcctcctgc
ccctccctttgcacctgctccaaccaggccagccgagtcatctgcaccaggcaaaacctg
gaggaggtgcctgaaagcatatcagtcaacacacgatacctcaacctgcaggagaactcc
atacaggttatcaagtcagacacattcaagcacttgaggcaccttgagatcctccagctc
tcgaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaac
acactggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctacgagagctgtggctgcgcaacaaccccattgagactctgccaggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atctctgacgcagcctttgtgggcctcatcaatctacgatacctgaacttgggcatgtgt
gggctgaaggacattcccaaactgacggccctcgtgcgtttggaggagctggagctgtca
ggaaaccggctggagatcatccgacctggttccttccagggcctggtgtctctccgcaag
ctgtggctcatgcactcacaggtgtccgtcattgagcgcaatgcctttgatgacctgaaa
aacctggaagagctcaacctgtcccataactccctgcactccttgccccatgacctcttc
acgccccttcaccagctggagagggtacaccttaaccacaacccttggatctgcaactgt
gatgtgctttggcttagttggtggttgaaagagacggtgcccagcaacaccacctgctgt
gcccgctgccatgctcccccattcttaaagggcaagtacattggagagcttgaccagagc
cacttcacctgctatgcgcctgtcattgtggagccacctacagacctcaatgtcactgag
ggtatggctgctgagctcaagtgtcgcacaagcacctccacaacatctgtcaactggatc
acccctaatggcactttaatgacccatggctcttacagggtgcggatatccgtcctacat
gatggcacgctcaacttcactaatgtcactctgcgtgacacaggccagtacacctgcatg
gtcaccaatgctgctggcaataccacagcaactgctgtcctcaatgtcactgctgctgat
gccagtgtcaactacacctactttacaacagtcactgtggaaacagtggagaccccagga
gatgaagagtctgcattggtagccatcaatgagaccttcatccgtgttcactctggcccc
actccctcaggacacctgtggccagaaggtgttcctaccacagcctcctctctgtcagcc
ggctggtcctcctcctctcctcgggccacccgacccaccttcactgtgcccatcactgag
ccaggcttctcaggcctggatgacgtaatgaagaccaccaagatcatcattggctgcttc
gtagccattaccttcatggcagctgtgatgctggtggtcttctacaagctgaggaagcag
catcagctgcataaacaccacggccctgctcgtgccatcgagatcatcaatgtggaggat
gagctgggggccggggccagtggtcggggcagcggcatctcaggaggctccaccatgacg
cagagtggaagcagtggaataggagggggccagagcctcaggctgcaccacccagagata
gtcaacctgccgaatctggcccgatcagagcacctcaaccactactacaaaacccatcac
ttcaacaacaacatgatgggcctgggcatgggcacaggttctggtatgggcctcaacaac
aacaacaacccctcaccttgctctcagtctcaaaacacatccatgtcctgttcccaggtt
ccaaccgccaccagcggaggaacacccacaggtggcaccctgccctcccctgtgcccctg
ccccagttgggcctccacagttctctgaaaggccttatggggaaaagccagaatgagccc
ctgctttttaagagtggctccaaggaaaatgtgcaagagactcaaatttga
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