Siniperca chuatsi (mandarin fish): 122869248
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Entry
122869248 CDS
T08948
Symbol
rab11fip4a
Name
(RefSeq) rab11 family-interacting protein 4A isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122869248 (rab11fip4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122869248 (rab11fip4a)
Membrane trafficking [BR:
schu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122869248 (rab11fip4a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_9
EF-hand_1
EF-hand_6
bZIP_2
bZIP_1
VGPC1_C
DUF2586
EF-hand_8
DUF4852
Motif
Other DBs
NCBI-GeneID:
122869248
NCBI-ProteinID:
XP_044037979
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Position
LG21:21104268..21134437
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AA seq
599 aa
AA seq
DB search
MDGHVFPDQEQLLQFLRRLKEVFDVCDEDADGFIRVEHLVDLGLQFGQGDEVKKLTRYLD
PNAHGKINFKDFCHGVFAIKGCEEILKMAVGPRSVTANQPSVTDNGYIYQNGEAKLGPPI
IMCTRSYPECSVYGESCGADGECDMDSSIENGNSSDSTRQDSHLIGSASASVISGEEQFE
DYGEGEDVDFTPSSPCPEDDTRTNGFSDLGSSLPSSAGQTPQKMRQLYNSELLDIYCTQC
CKKVNLLNDLEARLRNLKANSPNRKISSTAFGRQLFQANHSVFGSSQGSSTEDLFTDSID
SCDLDITEKVSYLEKKVTELESDSLANGDLKSKLKQENTQLVHRVHELEEQVKDAEARAD
QSLEEETKRHREAYSKMERDRNIEIDLLCNRVQQLEEENGEMKLNVCRLKSQTEKLDQEK
QRMTDKLEDTSLRLKDEMDLYRKIMDKLWHNRHEFQKEKEAMQELIDDLRRELEYLQYFK
LEMEHPGKGKGLSEYNARTREIEMEHEVKRLKQENHKLRDQNDDLNAQILSLSLYEAKNL
FACQTKAQCLAAEIDNASRDELVDALKEQEEINLRLRQYMDKIILAILDHNPSILEIKS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggacggacatgttttccccgaccaagagcagctcttgcaatttctgaggaggctaaag
gaggttttcgacgtgtgtgacgaggatgctgacggtttcatccgggtggagcacttggtg
gacctcggtcttcagttcggtcaaggagacgaggtgaagaagttgaccaggtacctggat
cctaacgctcatgggaaaatcaacttcaaagacttttgccacggagtattcgccatcaaa
ggttgtgaggagatactgaagatggctgtgggtcctcgcagtgttaccgccaaccagccg
tctgttactgacaatggttacatttaccagaacggtgaggccaagctgggccctcccatt
atcatgtgtacgcggtcctacccagaatgcagtgtgtatggtgagagttgtggtgctgac
ggggagtgtgacatggacagcagcattgaaaatggcaacagctctgactcaacacgacaa
gacagccacctgattggctctgcgtctgcgtctgtcatctctggggaggagcagtttgag
gactacggtgagggggaggatgtggattttactccaagcagtccttgccctgaagatgac
acccgaacaaatggcttctcagacctgggatcttcccttccctccagtgctgggcagact
cctcagaagatgcggcagctgtataacagtgagctgctggacatctactgtactcaatgc
tgcaagaaagtgaatctactcaatgacctggaggctcgacttcgaaacctcaaggccaac
agccctaatagaaagatttccagcacagcatttggacgccagctgttccaggccaaccac
agcgtgtttgggtccagtcagggcagcagcacagaggatttgttcacagacagcatcgac
tcctgcgacctcgacatcacagagaaagtcagttatctggagaagaaggtaacagagttg
gaaagcgacagtctggccaacggtgacctcaagtctaaactcaaacaggagaatacacaa
cttgtacacagggtgcatgagctggaggagcaggtgaaggatgcagaggcgagggcagat
cagagtctggaggaggagacgaagaggcaccgggaggcttacagcaagatggagagggac
agaaacatagagatagacctgctctgtaaccgggtacagcagttagaagaagagaatgga
gagatgaagttaaatgtgtgcagactcaagtctcagactgagaaactggaccaggagaag
cagaggatgacagataagctggaggacactagcctgagactgaaagatgagatggacctc
tacaggaagataatggacaagctctggcataaccgccatgaatttcagaaggaaaaagag
gccatgcaggagttgattgatgatctccgccgggagctggagtatctgcagtattttaag
ctggagatggagcatccaggaaagggcaaggggctgtcagagtacaatgccaggaccaga
gagatcgaaatggaacatgaagtcaagagactgaaacaggagaaccataagctgcgggat
cagaatgacgacctgaacgctcagattctcagtctgagtttgtacgaggctaagaacctg
tttgcctgtcaaaccaaggcccagtgcctggcagctgagattgacaatgcatccagagat
gagctggttgatgctttgaaggagcaggaggagatcaacctgcgtctgaggcagtacatg
gacaaaatcattctggctattctcgaccataacccctccatcctggagatcaagagttaa
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