Siniperca chuatsi (mandarin fish): 122869304
Help
Entry
122869304 CDS
T08948
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122869304 (ddx27)
03009 Ribosome biogenesis [BR:
schu03009
]
122869304 (ddx27)
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122869304 (ddx27)
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122869304 (ddx27)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
Pre-60S particles
Helicases
122869304 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
SNF2-rel_dom
FerA
Myb_DNA-bind_4
PRK
Motif
Other DBs
NCBI-GeneID:
122869304
NCBI-ProteinID:
XP_044038093
LinkDB
All DBs
Position
LG2:64234..80811
Genome browser
AA seq
768 aa
AA seq
DB search
MLEQLGLIGTIRDEEESPEEPDTESDQEDEPIVLNRKKKFGSRGARDFNTDFEFGERDGL
NHDDDWVMADIMKQLKNKRTATTLDQKIEKVRKKRKAEEKSAESDAAEGFAGTNQEDEHD
EEEDVKPHAGEADGGDDDEVEEEDEEDEDEFDSGDEEILTKSDTLRDKERRRRKRKAGEE
APESFYEDASQYNDQLTFDDMNLSRPILKAITALGFKQPTPIQKACVPVGLLGKDLCACA
ATGTGKTAAFMLPVLERLVYKPRASQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCL
AVGGLDLKSQEVALRAGPDVLIATPGRLIDHLHNTPSFELTHIEILILDEADRMLDEYFE
EQMKEIIRLCSYNRQTMLFSATMTEEVKDLAAVSLKQPIRIFVNSNTDVAPFLRQEFVRI
RPNREGDREAVVAALLTRTFQDHVMCFTQTRKQAHRLHILLGLMGLNVGELHGELSQNQR
LENLRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGR
SVSLVGESERKMLKEVVKSAKSSVKARVLPPEVILKFRDLISKLEKDIEAVMKLEREERE
LAASEAKLSVAQKRLDGPASSCQSQRVWFQTQQERKQSRMSKALQEFDLALRGKKRREKF
LKDGGKKELTSEERAQFEILKAQMFAERAAKRERRPKRARAMVEDEKPSTAANPKAGKGG
KKSVFDKELTNTSSKALKHYRAGPSFTDRKRLGLDRKRPGSSRFKKKK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgttggagcagctgggtctgatcgggacgatccgggacgaggaggagagccccgaggaa
cccgacaccgagtccgaccaggaggacgagcccatcgtcctgaacaggaagaagaagttt
gggagtcggggggcgagagactttaacaccgactttgagtttggagagagagacgggctg
aaccatgacgacgactgggtgatggccgacatcatgaaacagctcaagaacaagagaact
gcgactactctggaccagaaaatagagaaagtcaggaagaagaggaaagctgaggagaaa
tcagctgagagcgacgctgctgaaggttttgcagggacgaaccaggaggatgaacatgat
gaagaggaggatgtgaagcctcatgcaggagaggctgatggaggtgatgatgatgaggtg
gaggaggaggatgaagaagatgaagatgagtttgactcgggtgatgaggagattctgacc
aaatcagacaccctgagagacaaagaacgacggcggaggaagaggaaggcgggagaggag
gctccagagtcgttctatgaagatgcctctcagtacaatgatcagctgacctttgatgac
atgaacctgtcccgacccatcctgaaggccatcacggctctgggcttcaagcagccgact
cccatccagaaggcctgtgttcctgtcggcctgctgggcaaagacctgtgcgcctgcgct
gctactgggacagggaagacggcagccttcatgttgcctgtgttggagcgtttggtttat
aagcccagggcgtcccaggtgacccgggtcttggttctggttcctaccagggagttgggg
atccaggttcactccgtggcccgtcagctcgcccagttcacctccatcaccacctgcctg
gctgttggtgggttggacctgaagtctcaggaggtggcgttgagggcggggccagacgtt
ctgatagctacacctggccgactgatcgatcaccttcacaacacgccgagctttgagctg
actcacatcgagatcctgatcctggacgaggctgacaggatgttggacgagtactttgag
gaacagatgaaggagatcatcaggttgtgttcttacaacagacagaccatgttgttctcc
gccaccatgacagaggaggtaaaggacctggcggcagtctcgttgaagcaaccaatcaga
atcttcgttaacagcaacactgacgtggctccgtttctgcgacaagagttcgtccgaatc
cgaccaaacagagagggagacagagaggccgtggtggccgctctgctgactcggacgttc
caggatcacgtgatgtgtttcactcagacgaggaaacaggctcacagactgcacatcctg
ctgggactgatgggactgaacgttggagaactgcacggagaactgagccagaaccagaga
ctggagaacctcaggcgttttaaagatgaacagattgatatcttggtggcaacagatgta
gcagccagaggtctggacatcgacggagtcaaaacagtgataaacttcaccatgccgtcc
acagtgaagcactacgttcaccgtgtcggccggacggcgagagccggtcgctcgggacgc
tcggtgtctctggttggagagtctgagaggaagatgctgaaggaggtggtgaagtcggcc
aagagcagcgtgaaggctcgagtcctgccgccagaggtcatcctgaagttcagagatctg
atctctaaactggagaaagacatcgaagctgtgatgaagctggagagagaggagagagag
ctggctgcgtctgaggccaagttgagtgtggctcagaagcgtctcgatggccccgcctcc
tcctgtcaatcacagagagtctggtttcagactcaacaggagaggaaacagagccgcatg
tcgaaggctctgcaggagttcgatcttgctctgagagggaagaagaggagagaaaagttc
ctgaaagacggcgggaagaaggagctgacgtctgaggagcgcgctcagttcgagatcctg
aaggctcagatgttcgctgagcgggcggccaagagagagagacgaccaaagagagcgaga
gcgatggtggaggacgagaagccgagtacagcagccaatccgaaagcaggaaaaggaggc
aagaagtctgtgtttgacaaagagctgaccaacactagcagcaaggctctgaaacactac
agagctggaccgtccttcacagacaggaagcgtcttggtttagacaggaagcgtcctggc
agctccaggttcaagaagaaaaagtga
DBGET
integrated database retrieval system
