Siniperca chuatsi (mandarin fish): 122869415
Help
Entry
122869415 CDS
T08948
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122869415 (usp43b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122869415 (usp43b)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122869415 (usp43b)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122869415 (usp43b)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122869415 (usp43b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
BILBO1_N
Motif
Other DBs
NCBI-GeneID:
122869415
NCBI-ProteinID:
XP_044038333
LinkDB
All DBs
Position
LG21:complement(17469914..17539203)
Genome browser
AA seq
1222 aa
AA seq
DB search
MERQSRGKEEMSTSKGEKRKEKKPKSGKLFRKKSLKSVGSFMNRIIKTLGTFTHFGDADV
HDAEDDDGGFRNGAPCTLSASSGIVKEDVQVAWDRVVKNTSSTSSSLCTGREKLLHQYGD
KIPGVLGLKNHGNTCFMNAAVQCLSNTDLLAEYLGLERYKLDLSQTRINGLVRSDETRLA
RGEVTEQLASLVRALWTLEYTPQLSVDFKTIVSKHGSQFRGNSQHDALEFLLWLLDRVHE
DVNLASHNNNNKSKAAGKGPGGAEEVPSPDPSQSQQPRVQHSFVQKHFQAQYKSSLTCPH
CLKQSNTFDPFLCISLPIPLRQTRPLCVILVFSTKGQRYLRVGLAVPLFGSVACLRRMVA
DEGKISPDQVILTEVYSTGFQRSFFDEEDLTSIAENDVIYAFQAPPLYIRGGSARISGYH
HSLPSSPYSTGPEGQRLPSSGTLSSEFLNQGVPVKILLLVCNAAGAGQQAVRFGPPFLMR
EDRSISWDQLQQSILSKLYYLMINGAQAQNTRVLFNIRVVGGSAFYSYLSPQDGRPLYHP
AVDRVLKLCGSGGPPHVKLIIEWEHRIKDCLFGNIQEEVVKDAESVRNQQQQHVQQYSCT
LDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNK
LTTFVHFPLAGLDMTPHMVSRNHGTHQPPLQPGWKQSRRPDLAPPDFLYDLYAVCNHHGG
MHGGHYTAFCRNSVDGQWYSYDDSSAEPVPEAEVCTRGAYILFYQRRNTIPPWSASSSVT
GSTSSSTSDHWLVRLTGGSKRGSVVSGGPIPGPSGPIQAPESPELPVFGDEPPTTVETNG
FEAKPFVRGTQGRSVSMRSPTKPKETLSKVLPLRWSFGSKDRIKHPVQTQPGELVEYLES
GRRPRCTKDPIITLVATPPQRNAQGRAFEVGQDCSSPSGSSLSYTDRPGSDTCYSPKIPE
GQSRPCVERSISQGVSNSSSVKARDYGSLRQRSSKRARQDQGRTLDLQLQLQRGAILVGH
ISHSAPPSRDSTLRRTKIQTGVTSRAQKDLLQMVIQPEDRRGQRGQEGRSHDSLLSFFKP
GFMKKDLPGSPIKGQDRRMNGHGQLGKLASSNLAKLSLSNGTLTTVAPEERKASVIPSCD
AHNCKVQLVNGKAGNHEPADIKHAHSSSNIQTKLDLTFRRCASLQRNGEVVAPPAQRILL
SDKPSYATLQRTRYSTTSLVPL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcagagcagaggcaaggaggaaatgtcgacatcgaagggggagaagcgcaaa
gagaagaagccgaaatctgggaagcttttccgaaagaaatcgctgaagtctgtggggagt
tttatgaacagaatcatcaaaactttgggcactttcacccactttggagacgctgacgtg
catgacgcggaggacgacgatgggggatttcggaatggcgcaccttgcaccctcagcgcc
agctcgggaatcgtcaaagaggatgtacaggtggcttgggatcgcgtggtgaagaacact
tcgagcacgtcttcttctctgtgcaccggcagagaaaaactccttcaccaatacggagac
aaaatcccaggggttctggggctgaagaaccacgggaacacctgtttcatgaacgccgcc
gtccagtgtttgagcaacaccgacctgctcgcagagtacctgggtttggagcgatacaag
ctggacctgagtcaaaccagaataaacgggctggtgagaagtgatgagacgcggcttgcc
aggggagaagtcacggagcagttggcatccctggtcagggctctgtggactctggagtac
accccacagctgtctgtggacttcaagactatagtgtccaagcatggatcgcagtttcgt
ggtaattcccaacatgacgccctggagttcctcctgtggctgctggaccgcgtccacgaa
gacgtcaatttggcctcccacaataacaacaacaagagcaaagctgccggaaagggcccc
ggtggagctgaggaggtgccgtctcctgacccgtcccagtcccagcagcccagagtccag
cacagctttgtccagaaacatttccaggcacaatacaaatcttcactgacttgcccccac
tgtctgaaacaaagcaacacctttgacccgttcctctgcatctcactccccattcctctt
cgccagaccaggccgttatgtgtgattctggtgttcagcaccaaaggacagcggtacctg
cgggtcgggctggctgtgcctctgttcggctctgtggcctgcctgaggaggatggtggct
gacgaggggaaaatttccccagaccaggtgatcctgacagaggtttactccacagggttc
cagcgctccttctttgatgaggaggatctgaccagcatagctgagaatgatgtcatctac
gccttccaggctccgcccctctacatcagaggaggctctgcacggatctcagggtaccat
cacagcctcccatcatccccatactccactggaccagagggtcagaggttaccttcatct
gggacattgtcgtcagagttcctcaaccagggtgttcccgtaaagattctgctgttggtg
tgcaacgctgcaggggcaggccaacaggctgttaggtttggacctccattcctaatgagg
gaggaccggtctatttcctgggaccagctgcagcagagcatcctcagcaagctttattac
ctgatgatcaatggagcccaggcacagaataccagagtgctgttcaacatccgtgtggtg
ggagggtcagcattttacagctacctgtcacctcaagacgggcggccactttaccaccct
gctgtcgacagagttctgaagctctgcggctcaggaggacctccacatgtgaagctcatc
atcgaatgggagcacagaatcaaagactgcctgtttggtaacattcaggaggaggtggtg
aaggatgcagagagcgtgaggaatcagcagcagcagcatgtccaacagtacagctgcacc
ttggatgagtgctttcagctctacaccaaagaggaacagcttgccccagatgatgcctgg
aagtgcccccactgtaagcagctgcagcagggcatggtgaagatgagcctgtggacgctc
ccggacattctcatcctccacctgaagcgcttcaggcaggtgggagagcggaggaacaag
ctcaccacgttcgtgcattttcccctggcgggcctggacatgacgcctcacatggtgagc
cgcaaccacggcacccatcagccccctctgcagcctggctggaaacagtccagacgacct
gacttggctcctcccgacttcctgtacgatctgtatgctgtgtgcaaccaccatggagga
atgcacggcggacattacacagccttctgcaggaactcagtggacggccagtggtacagt
tatgatgacagcagtgctgagccggttccagaggcggaggtgtgcacacgtggagcctac
atcctcttctatcagagaagaaacaccatccctccttggtctgccagttcctcagtcacc
ggatccaccagctcatccacctctgaccactggctggtccggctgacgggaggcagcaag
aggggtagtgtggtgtcaggaggacccatccctggaccttcggggcccatacaggcccca
gagtctcctgagctgccagtgtttggagatgaaccccccacaacagtagaaacaaatggg
tttgaagccaagccgtttgtccgtgggacccaaggcaggagtgtaagcatgagatcacca
actaagcccaaggagactctgagcaaggttctgccattgcggtggtcttttggctccaag
gaccgcattaaacacccagtccagacccagcctggagagctggtagagtacctggagtct
gggcgccggccacgatgtaccaaagaccctatcataacattggtggccaccccaccacaa
aggaatgcccagggaagagcctttgaagtaggacaggactgcagctcacctagcggtagc
agtcttagttatacagacagacctggctccgacacttgttactcccccaaaataccagag
ggacagagcagaccttgcgtggagagaagcatcagccagggagtcagtaacagcagcagt
gtcaaagccagggattatggttctctgaggcagaggtcatctaagagagcgaggcaggac
cagggcaggaccctggacctccagcttcagcttcagagaggggccattctagtgggtcat
atcagccacagtgcacctccaagcagagattccacattgcgaaggaccaagatccagaca
ggcgtgacctccagggcacaaaaagacttgttacagatggttattcaacctgaggacagg
agggggcagaggggacaggagggtcgcagccacgacagcctcttgtcttttttcaaacct
ggtttcatgaagaaagaccttcctgggtcaccaatcaaggggcaagacaggcgtatgaac
ggccatggacagctgggaaagctggccagcagtaatttagccaaactgtccctctccaat
ggaacgctgaccacagtggcacctgaagagaggaaggccagtgtcatcccgagctgtgac
gcccataactgcaaagtacagctagtcaacggaaaggctgggaatcacgagcctgcagac
attaagcacgctcacagctccagtaacatccagaccaagctggatctgacatttcgcagg
tgtgcctccctgcagaggaacggcgaagtagtggcccctccagcccagcgcatcctgctg
tcagacaagcccagctacgccactctgcagcggacacgatacagtaccacctccctggtg
cctctgtga
DBGET
integrated database retrieval system
