Siniperca chuatsi (mandarin fish): 122869437 Help Entry 122869437         CDS       T08948                                  Name (RefSeq) cysteine protease ATG4D   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism schu  Siniperca chuatsi (mandarin fish) Pathway schu04136   Autophagy - other schu04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:schu00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     122869437    04136 Autophagy - other     122869437  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:schu01002]     122869437   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:schu04131]     122869437    03029 Mitochondrial biogenesis [BR:schu03029]     122869437 Peptidases and inhibitors [BR:schu01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    122869437 Membrane trafficking [BR:schu04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     122869437 Mitochondrial biogenesis [BR:schu03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     122869437 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  122869437 NCBI-ProteinID:  XP_044038392 LinkDB All DBs Position LG21:complement(17850464..17858623) Genome browser AA seq 468 aa AA seqDB search MNPSTSSAHCEGQSPVDDLMDDWFLLSPESAGPQGLAVSREDQETEERGKLKSKLVSAWN SVKYGWSLKQKSKFSKSSPVIMLGQSYELKDQGERERFRRSFASLLWLTYRRGFPQLAGC SLTTDSGWSCVLRTGQMLLAQGLLLHLMSPGWTWSVSHHAVKDDMDLLVIRSADSKEHGL NLKERPNKRGRKLSLDSRLDRPMEAKHRKVVSWFADHPAAPFGIHQLVELGNSSGKKAGD WYGPSIVAHILRKAVAAAAAASADLSNLVVYVAQDCTIYLEDVTRLCEQPLPQPWKSVII LVPVRLGGQDLNPSYITCVKKLLTLQCCIGIIGGKPKHSLFFIGFQDDHLLYLDPHYCQP TVDTTKENFPLESFHCKYPRKMAFSRMDPSCTIGFYAKGQKDFESLCTVVNETLSTSAET YPMFIFAEGKSQEEAGSNTPTDNITYIQRKNEQRRVNTSNSMDEFVLL NT seq 1407 nt NT seq  +upstreamnt  +downstreamnt atgaatcccagcacctcctcagctcactgtgagggccagtcccctgttgatgacctaatg gacgactggttcttgctctcccctgaatctgctgggcctcagggcctggcagtgagcagg gaagaccaggagacagaggagcgaggcaaactcaaatccaagttggtctcagcgtggaac agtgtcaaatatggctggtccttgaagcagaaatccaaattcagcaagagctctcctgtg atcatgcttggacaatcctacgagctcaaggatcaaggggagagagagcgtttccgtcgc tcctttgcatctctactgtggttgacgtacagacggggtttccctcagctggcaggctgc tctctgaccactgacagcggctggagttgtgttctacgcacggggcagatgctgctggca caaggcctgctcctgcacctgatgtcaccaggttggacttggtctgtgagccaccatgcg gtcaaagatgacatggacctgctagtgattcgctccgcagacagtaaagagcatggactg aatttaaaggaaaggcccaataagaggggtcgaaaactgagcttggattcccgcctggac agacccatggaggctaaacacagaaaggtggtatcgtggtttgcagaccatcctgcagcc ccttttgggatacaccagctggtggagttgggcaacagctccgggaagaaggccggggac tggtacggaccttccattgtggcacatatcctccggaaagctgtggcagcggcagcggca gcatcagcagacctttccaatctagtcgtgtatgttgcacaagattgcaccatctacttg gaggatgtgacgaggttgtgtgagcagcctctcccgcagccctggaagtctgtcatcatc ctggttcctgtgcgacttggaggacaggatctcaatccctcctacatcacttgtgtcaaa aaactcttgacattacaatgctgcattggaatcattgggggcaaaccaaagcactcgttg tttttcatcggcttccaggatgaccatctgctgtacttggaccctcactactgtcagccc acagtggacacaacaaaggagaactttcccttggagtcatttcactgtaaatatcccagg aaaatggctttctctcgcatggaccccagctgtaccataggattctatgctaagggccaa aaggacttcgaatcactgtgcacagttgttaatgagactctctccacatctgcagagacg taccccatgtttatatttgcagaaggaaaaagtcaggaggaggcgggaagcaacacaccc acagacaacatcacctatatccagaggaagaatgaacagagaagagtcaacactagcaac agcatggacgagtttgttctattatga

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