Siniperca chuatsi (mandarin fish): 122869483
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Entry
122869483 CDS
T08948
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122869483 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
schu04054
]
122869483 (dhx58)
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122869483 (dhx58)
Pattern recognition receptors [BR:
schu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
122869483 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
122869483
NCBI-ProteinID:
XP_044038487
LinkDB
All DBs
Position
LG21:complement(7156872..7161297)
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AA seq
681 aa
AA seq
DB search
MADFELYAYQEEVVERALLRENTIIWLPTGGGKTRAAVYVAQKHLETTPKAKVVVLVNKV
HLVEQHYTKEFKPHLGCNYTLVPVSGESEEKDFFGKVVQDSDVVICTAQILYNALTNMEE
TKHVELSDITLLIIDECHHTHKDSVYNKVMGCYLEKKLKGEQPLPQILGLTASPGTGGAK
ILEKAVEHVLQICANLDSAIVSAKNYVSELKKKVPRPIKTFDIVEKRPEDPFGDHLKWMM
QLIHEYMNLPPDLKLRECGTQEYEADVVLLEQRGVKENNRLLAQCALHLRQYNDALLIND
TLRMMDAYRSLKEFYITKITTAIDGTDFFLVGLFQENEKDLKKLAGDSRYENPKMFQLES
TLLKQFGPGVQSRGILFSKTRKSIRCLHDWVVTNKALQEAGIKAAILTGAGNGNSYMTQN
EQADTIRNFRDGTLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARARDSQ
YSVVAQKGGREVRRELTNEYLEDLTGKAIAKVQDMNLHEFRREITDLQIQAVTRRKVAES
RKIERKSLNTAASIQLVCRNCFKSVASGSDIKLVDNAHYVNVNPDFKEYYKVGGQVVLPR
SFEDWEPGRTISCNNGSCNKEWGFEMKYKQIALLPNIAIKNFALDTPDGRMTVKKWKDVT
FTVEDFSFEEYCQGNFPDIFD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttgaactgtatgcataccaggaggaagtggttgaaagggcacttctgaga
gagaacactattatttggctgccgacgggaggtggaaagacccgtgctgctgtatatgtg
gcccaaaaacacctggagaccacaccgaaggctaaggtggtggtcctggtaaacaaggtt
caccttgtagaacaacattacaccaaagagttcaagcctcacttgggctgtaactacacc
ctggtgccagtcagtggagagagtgaggagaaggacttcttcgggaaagtggtgcaggac
tcagacgtggtcatctgcacagcacagatcttgtataatgctctgactaacatggaggaa
accaaacatgttgagctctcagatattactctactgataatcgatgagtgtcaccacacc
cacaaggactcagtctacaacaaggtaatgggatgctatttggagaaaaagttgaaagga
gaacaaccattgccacagatcctgggtctgactgcatcacctgggacagggggcgcaaag
atcctggaaaaggctgtggagcatgtactgcagatttgtgccaacctggactcagccata
gtttcagccaaaaactatgtctccgagctgaagaagaaagtacccagacctatcaagaca
tttgacattgtggagaaaagaccagaggatccatttggggatcatctgaagtggatgatg
cagctgatccatgagtacatgaacctacctccagacttgaaactgagagagtgtggcaca
caagagtacgaggcagatgtggtgcttctagagcagcgaggagtaaaagagaacaacaga
ctgctagcacaatgtgctctccacctcagacagtacaacgacgccctgctcatcaatgac
accctgcgaatgatggatgcttatcgctccctaaaggagttctacatcaccaagatcacc
acagcaattgatggaacagacttcttcctggtgggacttttccaagagaatgagaaggac
ctgaagaaactggcaggggattctcgctatgagaatccaaagatgttccaacttgagagc
actctgctgaaacagtttggtccaggtgtgcaatcaagggggatcctcttcagtaaaacc
cgtaaaagcatccgctgtctacatgactgggtagtcaccaataaagccttacaggaagct
ggcatcaaggcagccatcctcactggggctggcaatggtaacagttacatgacacagaac
gagcaggcggacacaatccgaaatttccgtgacggtactctcaacctcctgatctccacc
agtgtggccgaagaaggccttgacatccctgaatgcaacctggtggtacgctatggactg
cttacaaatgagattgcccagcagcaggccagcggacgtgcccgagcgagagacagccag
tattcagtggtcgcccagaaaggggggcgggaagtgcgccgggagctcaccaatgaatat
ctggaagacctgactggaaaagccattgctaaggtccaagatatgaacctccatgagttt
cgcagagagataactgacctacaaattcaggcagttactcgcagaaaagttgcagagagc
cgcaaaatagagaggaaaagtctcaacactgctgccagtatccagctcgtgtgtcgaaac
tgtttcaagtctgtggcctctggcagtgacattaaacttgttgacaatgcacactatgtc
aacgtcaatcctgactttaaggaatactacaaagtcggggggcaggtagtgctaccaagg
agttttgaggactgggagcccgggcgtacaatcagttgcaataacggcagctgcaacaag
gaatggggatttgagatgaagtacaagcagattgccctgctgcccaacatagccattaag
aactttgccctggatacccctgatggcaggatgactgtaaagaagtggaaggatgtcact
ttcactgttgaggacttcagctttgaagaatactgccaaggcaacttccctgacatcttt
gattga
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