Siniperca chuatsi (mandarin fish): 122869557
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Entry
122869557 CDS
T08948
Symbol
cntn4
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122869557 (cntn4)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
Contactins
122869557 (cntn4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_C17orf99
V-set_CD47
Ig_5
Pur_ac_phosph_N
Tissue_fac
C2-set_2
C2-set
Interfer-bind
fn3_4
Motif
Other DBs
NCBI-GeneID:
122869557
NCBI-ProteinID:
XP_044038647
LinkDB
All DBs
Position
LG2:28778481..28964836
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AA seq
1029 aa
AA seq
DB search
MMFLWKLLVLHSLLACLGESSVLQSPVFTKQPGSIVYPVETLERNREVVFSCEAQGSPPP
IYQWKLNSTEISPKSGSHYSLSGGNLRISHLNKDQDAGTYQCFASNSFGTIVSREASLTF
AYLENFKTHRRSSVSVREGQGVVLLCGPPPHSGDLIFSWIFNEYPTFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEVVH
VAKGSTVKLECFALGNPVPSINWRRVDSVPFPRKVDMRKASGVLEIPYFQQEDAGTYECI
AENSRGMNTVKGKLSFYAPPHLIEKPQDVQKLIDDSLVWECKATGKPKPSYRWMKNGENL
ESAEERIQVANGALSISRLTLSDTGMYQCVAGNKYGEVYSNAELRVIAVAPDFSHNQLRS
QTLVKVGGDVLVECKPKMSPWGVVSWRKGSEPLQESNRLSILDNGNLRIWNVTKSDAGLY
TCVARNQFGVASSTGSITVKEPTIITTLPSTLDVTVGESVVLPCQVSHDPSLELKFTWFF
NEQLIHFGSHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAVDLVVRG
PPGPPTSIHVEEITDTTAALSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVGGH
RLTATVIDLSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGPGFGYVVAFRPRGATGWMQAAVPSAEASRYIFKNESIQPFSPFHV
KVGVYNNEGEGPFGPVTTIYSAEEEPGRAPTRVRAKSLSASNIEVSWKALPWNASKKRVL
GYELRYWSRSEREDTASVQRTVGNQTSAIIHGVKGSTTYYISVRAYNTAGTGPPSTTVNV
TTKKPPPSQPPVKVMWNTSDSKIILNWEQVKALENESEVTGYKVLYKKNRHSRPNVMETN
TTSVELALPTDEDYIIQIKPFGEGGEGSSSRQITIPRIPGPNAVGSASKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttctatggaaactgctggtgctgcactcacttttggcctgccttggagagagc
agtgtcctgcagagtcctgtcttcaccaagcagccaggcagcattgtgtatcctgtggag
actctggagaggaacagggaggtggtgttcagctgtgaagcccagggaagcccacctccc
atctaccagtggaaactgaatagcacagaaatcagtcccaagtctggatctcactacagc
ctttctggaggcaacctcagaatcagccatctgaacaaagaccaagatgctggaacgtat
cagtgcttcgcctccaactctttcgggaccatcgtcagccgagaggccagtctaaccttt
gcatacttggaaaacttcaagactcacagaagaagctctgtatcagtccgtgaaggtcaa
ggagtggttctgctgtgcggccctccaccacattctggagatctcatattttcctggatc
tttaatgagtacccgacatttgtgaagcaggatactcgccgcttcatctcacaggagaca
gggaatctgtacatcgccaaagtggagccctcagatgttgggaattacacctgtgtggtg
accaacactgtcacaaagacccgagtccagggtccacccactccattagtgctccgcagt
gatggtgtgatgggtgaatatgagccaaagattgaagttcagtttccagaggttgttcat
gttgccaaaggatccactgtgaagctggaatgcttcgctctgggaaacccagtaccatct
ataaactggaggagagtggacagtgtacccttccccaggaaagtggacatgaggaaagcc
agtggcgtcttggaaatcccatatttccagcaggaggacgccggcacgtacgagtgcata
gccgagaactccaggggaatgaacacagtgaaaggaaagctctctttctacgcccctcct
catctcattgagaaaccccaagatgtccagaagctcattgatgactcgttggtttgggag
tgtaaagccacagggaagccaaagccttcttacaggtggatgaaaaatggagagaacctg
gagtctgcagaggagcgcatacaggttgccaatggggcattgtcaatcagtcgtcttacc
ctgtccgacacaggaatgtaccagtgtgtggctgggaataagtacggcgaggtctactcc
aatgcagagctccgagttatagctgttgccccagatttctctcacaaccaactgaggagc
cagacactggtgaaggtaggaggagatgtgcttgttgagtgcaagcccaagatgtctcct
tggggtgtggtctcttggcggaagggcagcgaaccactccaagaaagtaacaggctctcc
attctggacaacggtaaccttcggatttggaatgtgaccaaatctgatgcaggtctctac
acctgtgtggcaagaaaccagtttggcgtggcaagcagcacaggaagcatcacagttaaa
gagccaaccatcataaccaccctgccatccacgctggacgtcaccgtgggggagagtgtg
gtcctgccctgtcaagtgagccatgacccatctctggagctcaagttcacctggttcttc
aacgagcagctcatccacttcgggagccacggtggattttttgaaaaagtgggaggtcag
cattcggcaggagacattatgattcgaaatatccagctgaggcatgcagggaagtacacg
tgcgctgtgcaaacgaaggtggacagcatttccattgctgttgacttggttgtcagaggt
cccccgggcccccccaccagcatccatgtagaagaaatcactgataccacagccgctctg
tcctggaggcctggtcctgataatcacagtccaattacggcatacaccatccaggccagg
acaccattttccctcgggtggcaggctgtcactacagttcctgaggtggtggggggccac
cggctgacagctacagtaatagacctgagcccttgggtggagtatgagtttcgagtccta
gcaagcaacaccatcgggaccggcgagcccagcaagccatctaaacaagcaaggacaaag
gggacctctccaaaggtcacaccagctaatgtgagtggaggcggtggcagtcgctccgaa
ttagtcatcacatgggagccggttccagaagagctgcagaatggaccggggttcggctat
gttgtggcttttcgaccccgcggtgccacaggatggatgcaggctgccgtaccgtccgct
gaagcatccagatacatctttaaaaacgagagcattcagcccttctcgcctttccatgtg
aaggtcggcgtttacaacaatgagggggaagggccgtttgggcctgttaccactatctac
tccgctgaggaagagcctggccgagcgcccaccagggtccgtgccaagagcctgtctgca
tccaacattgaagtttcgtggaaagctctgccctggaatgccagcaagaaaagagttctg
ggctatgagctgaggtactggagtagaagtgaaagggaagacacggccagtgtgcaaagg
actgtaggaaatcaaacgtctgctattatccatggggtgaaaggcagcaccacatattac
atctcggtgagggcgtataacactgctggaacggggcctcccagcaccactgtcaacgtt
accaccaaaaaaccaccacccagccaaccaccagttaaagtgatgtggaacacatcagac
tcgaagattatattgaactgggagcaggtcaaagccctggagaatgagtcagaggtcact
ggttacaaagtgctttacaagaagaatagacacagccgtcccaatgtcatggaaaccaac
accacctctgtggagcttgccctccccactgatgaggattatatcatccagataaaacca
tttggagagggaggggaaggcagcagtagcaggcagatcaccatcccaaggataccaggc
cccaacgcagtcggctcagcatccaaggtctccactctgtcagccctcagtacaatagca
ctgtctttcacagcgcggacatctttatga
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