Siniperca chuatsi (mandarin fish): 122869720 Help Entry 122869720         CDS       T08948                                  Symbol capn1 Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism schu  Siniperca chuatsi (mandarin fish) Pathway schu04141   Protein processing in endoplasmic reticulum schu04210   Apoptosis schu04217   Necroptosis schu04218   Cellular senescence schu04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:schu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     122869720 (capn1)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     122869720 (capn1)    04217 Necroptosis     122869720 (capn1)    04218 Cellular senescence     122869720 (capn1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     122869720 (capn1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:schu01002]     122869720 (capn1) Enzymes [BR:schu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      122869720 (capn1) Peptidases and inhibitors [BR:schu01002]  Cysteine peptidases   Family C2: calpain family    122869720 (capn1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh Motif Other DBs NCBI-GeneID:  122869720 NCBI-ProteinID:  XP_044038888 LinkDB All DBs Position LG22:16226854..16261102 Genome browser AA seq 705 aa AA seqDB search MEERIYATGMAAKLRSQWDRDEGLGQNHNAVKFLGQDYECLRAQCLQSGRLFEDSLFPCA ASSLGFNELGPKSSKTYGVRWMRPTEFCKRPEFIVDGATRTDICQGALGDCWLLAAIASL TLNDNLLHRVVPHGQGFGQGYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFVHSAEGT EFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYDLNKAPSDLFSIIRRAIDR GSLLGCSIDITSSVDMEAVTFKKLVKGHAYSLTGVDEVMYRGSLTKLVRIRNPWGEVEWT GAWSDNSREWDSVDPSVKSRLQKRSEDGEFWMSFSDFLREFSRLELCNLTADALQNNQLK KWSSSLYQGEWRKGSTAGGCRNFPATFWLNPQFKIALQHPDSPDQSDCSFLVGLMQKDRR KKRREGKDMETIGFAVYEVPSEFAGSSGVHLKRDFFLTHASSARSELFINLREVSSRLRL PVGEYIIVPSTFEPAKEADFVLRVFSEKPANSEELDDDVAADLPPETQLNESQIDAGFKS LFRQLAGPDMEISITELQTILNRIISKHKDLKTDGFTQEACRGMISLMDTDGSGKLGLTE FHVLWEKIKRYLTIFREFDVDKSGTMSSYEMRMALKSAGFTLTNHLFQLIILRYSEADMS IDFDNFVTCLVRLETMHKTFRTMDTNNSKSITLNFTQWITLTMFA NT seq 2118 nt NT seq  +upstreamnt  +downstreamnt atggaggagcgcatttatgctacaggcatggccgccaagctgaggagccagtgggaccgt gatgaaggtctgggacagaaccacaacgcggtgaagtttctgggtcaggactatgagtgt ctgagagcccagtgcctccagagcgggaggctgtttgaggatagtttgttcccttgtgct gcatcgtctctgggattcaacgagctcggcccaaagtcctccaagacctacggagtccgc tggatgaggcccacggagttctgcaagcggcctgagttcatcgtggatggagctactcgc acagacatctgtcagggagctctgggggactgctggctgctggctgccatcgcctcgctg accttaaacgacaacctcctccacagagtggttcctcatggacagggctttgggcaggga tatgccggcatctttcacttccagttctggcagtttggcgagtgggtggacgtggtgatc gatgaccggctgccagtgaaggatgggaagctgctgtttgtccactcggcagagggaacc gagttctggagcgcgctgctggaaaaggcctacgctaagttgaacggctgttatgaggct ctgtcaggcggcagcacatcagagggctttgaggactttacaggcggcgtgacggagatg tacgacctgaataaagccccctccgacctcttcagcatcatccgcagggccatagacaga ggatcactgctcggctgctccatagacatcaccagctcggtagacatggaggccgtcacg ttcaagaagctggtgaagggacacgcctactctctgactggtgtggatgaggtgatgtac agaggaagtctgaccaagctggttcgcatcaggaacccctggggggaagtggaatggacc ggagcctggagcgacaactccagagagtgggacagtgtggatccctccgtcaaaagtcgg ctacaaaaacgcagcgaggacggtgaattctggatgtcgttcagtgacttcctgcgcgag ttcagccgtctggagctctgcaacctgacggctgacgccctgcagaacaaccagctgaag aaatggagctcatcgctctatcagggagagtggaggaagggcagcactgctggaggctgc aggaacttcccagcaaccttttggctgaaccctcagttcaagattgcgctgcagcaccca gattctcccgaccaatcagactgcagcttcctggttggcctcatgcagaaggaccgcagg aagaaacggcgggagggtaaagacatggagaccatcgggtttgcagtctatgaggttcca agtgagtttgcaggcagctcaggggtccacctgaagcgagattttttcctcacccacgcc tccagtgctcgctcagagctcttcatcaacctgagggaggtcagctccaggttgcggctg ccagtcggggaatacatcattgtcccctccaccttcgagccggccaaagaggctgacttt gtcctcagggttttctctgagaagcccgccaactctgaggagcttgatgatgacgttgca gcagatcttccgccagagactcagctaaatgagagccagatcgacgctggcttcaagagt ctcttcagacagctggcagggccggacatggagatcagtatcacagagctgcaaaccata ttgaacaggatcatcagcaaacataaagacctgaagacagacggcttcacacaagaagct tgtcgcggtatgataagcctcatggacacggacggaagtggaaaactgggcctgacagag ttccatgtactctgggaaaagattaaacgatacctgactatattcagggagtttgacgtg gacaaatcgggcaccatgagctcctatgagatgaggatggctcttaaatctgcaggtttc acgctgaccaaccatttgttccagctgatcatcctgcgctactctgaggccgacatgtct atcgactttgataactttgtcacctgtctggtcagactggagaccatgcacaaaaccttt cggaccatggacacaaataactccaaatccataaccctcaacttcacccagtggattacc ctgaccatgtttgcctag

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