Siniperca chuatsi (mandarin fish): 122869726
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Entry
122869726 CDS
T08948
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04060
Cytokine-cytokine receptor interaction
schu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122869726 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122869726 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
schu04052
]
122869726 (gdf5)
Cytokines and neuropeptides [BR:
schu04052
]
Cytokines
Transforming growth factors (RSTK binding)
122869726 (gdf5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
122869726
NCBI-ProteinID:
XP_044038924
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Position
LG2:2156219..2166031
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AA seq
627 aa
AA seq
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MKVVKRLSLLLSFWTLIYLHPVLGSLSRTRPTEPHHHRLGEAAERTAGGGEGEQTHGRTG
GGIGGSTPAAGRQPATASGTWKPSPVSPARITRIRAGPPLIKGETTVVKSKLTAATSASS
SLALRSGAVPVNRAQLQQQQRDRAVSLGRKEAARSWLPGGDVHINAHAPAAFSAHAAGKG
VGTAAAGGRGGSPGKHFEKVASRASAAAPVRTGPPHRAIGAQKQQQQQQQQQQQHAGPVA
QRGASNKAPKLSDREAHHKQPLVTPHDYMLSLYWSLSTGDLNSSALHEAGLANTITSFVD
KGQDERGPQLRRQRYHFNVSSLERDGLLGAELRILRKRLSDPRRASMGSTATDGGGGGGL
SPCLKLYTCSSGKQQAVLLQTKTVEDLLSGGEFSSKWEVFDIWKVFKGFKNQQNQHSQQL
CFELEALEHRGGRPMDLRTLGFARPGRTNKEKAFFLAFGKSKKRDLFYNEIKARSGHDNK
TVYEYLFTQRRMRRAPAARGAKKPLQQPPQSLPQHQVVKTQTRPRCHRRRLHVNFKEMGW
DDWIIAPLDYEAFHCDGVCDFPIRSHLEPTNHAIIQTLMNSMDPESTPPTCCVPTRLSPI
SILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtgaagcgtctttctcttctgctgagcttctggactctcatttacctgcat
cccgtcctgggttcactcagccggaccagaccaaccgagccccaccaccaccggcttgga
gaggcagcggagcgcacggcaggcggcggcgaaggagagcaaacccacgggagaaccggc
ggaggaatcggtgggtccacaccagccgcgggcaggcaaccggcgaccgcttctgggacg
tggaaaccctcaccggtgagtccggcgaggattactcggatccgcgcaggtccgccgtta
atcaagggtgaaacgactgttgttaaaagcaaacttaccgcagcaacatctgcgtcctca
tccctggcactgcgcagcggggccgtgccggtaaaccgtgcacagctgcagcagcagcaa
cgggacagagcagtcagcctagggcgcaaagaggctgcgcgctcctggctgcccggcggg
gatgttcacattaacgcgcacgctcccgcggcttttagcgcacatgcagcggggaaagga
gtcgggactgcggctgctggtggaaggggcggctcaccggggaaacattttgagaaagtt
gcttccagagcgagtgcagctgctccggtgcgcaccgggcctccccacagggccatcggt
gcgcaaaagcagcagcagcagcagcagcagcagcagcagcagcacgcgggtccggtggcg
cagcggggagccagcaacaaggccccgaaactgagcgaccgggaagcgcatcacaaacag
ccgctggttactcctcacgactacatgctgtcgctgtactggtctctctccaccggggac
ctcaacagcagcgctctgcatgaagccggtctggccaacaccatcaccagcttcgtggat
aaaggacaagatgagcgtgggccccagctgagacggcagaggtatcacttcaacgtcagc
tctttggaacgagacgggctcctgggggccgaactacgcatcctgaggaagcgtctgtct
gaccctcgcagagcctcaatgggatccacagccactgacggagggggtggaggaggcttg
tccccatgcctgaagctatacacctgctcttcaggtaaacaacaggctgttctgctccag
acgaaaaccgtggaggatctgctcagcggaggcgaattcagcagcaaatgggaagtgttt
gacatttggaaggtcttcaaaggctttaaaaaccagcagaaccagcattcccagcagctg
tgctttgaacttgaggccctggagcacagaggcggtcgccccatggacctgcgcactctg
gggttcgcccgacccggcaggaccaacaaggaaaaggccttcttcctggcgtttggcaaa
agcaagaagcgtgaccttttctacaacgagatcaaagcgcggtcaggccatgacaacaaa
accgtctacgaatacctgttcacgcagcgacgaatgcgccgggctcctgctgcaaggggc
gctaaaaaaccactgcagcagccgccacagtccctcccccaacatcaggtggtgaagacg
cagacgaggccgcggtgtcaccggagacgactccatgtgaacttcaaggagatgggctgg
gacgactggatcatcgcgccgctggattacgaggcctttcactgcgacggcgtctgcgac
ttccccatccgctcgcacctcgagccgaccaaccacgccatcatacagaccctgatgaac
tccatggacccagagtcgacgccgcccacctgctgcgtcccgacacgactcagcccaatc
agcatactctacatcgactctgccaacaacgtcgtctacaagcagtatgaggacatggtg
gtggagtcgtgtggttgcaggtag
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