Siniperca chuatsi (mandarin fish): 122869727
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Entry
122869727 CDS
T08948
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122869727 (arhgef40)
Membrane trafficking [BR:
schu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122869727 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
IQ_SEC7_PH
KIAA1755_C
PH
DHC_N2
KANSL3_1st
Motif
Other DBs
NCBI-GeneID:
122869727
NCBI-ProteinID:
XP_044038920
LinkDB
All DBs
Position
LG22:16909786..16951104
Genome browser
AA seq
1743 aa
AA seq
DB search
MGSEAMEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFVPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSNDFYLQVVPFSTRCPRLA
LKCLAPGGRTVQEILVPESQHPLVFSTEWLHSVNKERGHKREVGGGLDTCLVSTCDGVVR
LPWKEVVYPKFIHDPSEELGLMSNQEGPISNRLPSEGGSSLGGWGGSSSGELDSWSWDEE
EDDGLPPDGVDSEPALPRRRRSEDGLGRTARHPQLDGDYVELLEPRVGPDGGVDTRQRYL
EMHGICKTKTLPLCRRGKAIKLRKGKAWGYGRLEGSGSFRGVLGAKRDVVNPKGDILPPR
PPPVTEPGRGRRFYSSSVHDSDEGDKTNRDTEGLESHRLYFDGPFKERRPGVGKERDSNG
LTQPCRDEHGGKDSESGDSLVTNEIHDMMNHKVGHGIEGHSDHGSHSDSVFEDTDKPLSG
DSDATTPTSDAPERPFTGVLESGEITKSGSKIKSLSHPKVTEEIDEGKTEDRVCPRGKEV
KTAGFRAPRRKRKGKGAKGRARSGGRVHQKGSKQQGKAAQPSPTICAALTKLPITEENQS
EQREQADEPDGVPPSTNDETEDTRKSSAETEAKSVPVCNGQSGTSLFNHSNEEAGSGETC
PDQLNGVASKEPPLLRELDTELLQSGKLKLTGTVDRLGRALVVTETDASEESFCEQEMAR
VLACYHRITRPAAKDKGLTVLMDSRRSPPSTRSLSALKLFQVLVPGGLGSVLVLVEEQQG
SLSHNLEDAEIHTVRGTGVLQQYVDKQQLPKEMDGDFTHCHADWLVFRLSLESLTERCES
ALALLGEALQSMDTEPMPDNIKTVPLSIDKHRQLMVSVLADQRLTELQQRGGAWLAGLTN
SASGLAQKSPDCRAALAVTSKLYDSVDDALHRLVRVSNQRGRDLEALGRLAGLVDKLEKC
DKEIEQVQSQLEDYKDPPLSLSRLSLKQQKFKTFKETANELHSETLSVLSALEGWCELDW
AGLSNVQIRLPPVREKLRDMSHCLSDCWTTLDNTQRLLSTLTEATQWCDAVSSTSSSPSS
SSSTCPLASLPPIPPSRFQDARSLAIELGGGALLDLWTQTVERYQRTVAQVKPRFLQSDR
AQNQGQGKPKTPSANSLWDLMGPEGEGDWGLGSGGCEGGLQSWGSLASLFRPQTCSTLKI
GEEKGNKKDGVGGGSGGGAGGAGGGKFLQNLLNPAKKSPTDAPLPSKPPRKRHPSFDLQA
LLAPRRGTATPKPESPVGGPSRNSPMSWLGRRTLADPVITTSMAAAIPGWGGGGGVLIRG
VEVSSKEVVDHTGSPRQHVLLGRTERETGTDRAGSTAQSKLYLLWCRMLSSERQYVAVLK
GVEETYLPLLELSDTPASIRGKADTLFPNWASLSTFHSQNLLPAMEGALVQSLLQQDCFS
KYRDQFLQYSHYIRTKLELDSPLVTQAADFFKSKLPPASPLSPLSFPHCLQAPTHRLEQY
CEALEELGGINPASDSALSILRHAQRHGEDLRASDLIVGCPIPVAERGELVRQGELMVCG
GARRKRAGVRNVFLYQHVVIFTKQKSPGPGRISYSYKHSIKTGEMGLTQSVGEEGVKFEV
WVRQAPRTRDCITLQAKDREDRVTWTHDIAHLLWTHAINNTELCLKESLCMGISSKLLLD
ATGTPGSELDSIYSLNDRVHSSCSDSSSVGSQKEGGSPASGRDPRRSSGSTSYSQSQSPS
TAV
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggaggcaatggaggattgtgtgcagggggcgctctcatcactttatcctcct
tttgagagcacagcaccacccctcctctcccaggtcttttcagtcctggagtcaacctat
caacacgacagtcttcgctacctcctggactactttgttcctgccaagcacctcctgcac
aaactccaacagcacgcctgctctcagtacctgggctgcttgttccttcactctggctgg
cctctgtgtctaggcgagaaagtggtcgtacagctctccaccctggactggaggctcctg
cgcagtaatgacttctatctgcaggtagtgcctttctctacgcgctgcccccggctggcc
ctaaaatgtctggcccctggggggcgcaccgttcaggaaatcttggtacctgagtcacag
cacccccttgtgttcagcactgagtggttgcacagcgtcaacaaagaacggggccacaag
agagaagttggaggaggacttgatacctgcctggtcagtacatgtgatggtgtggttcga
cttccatggaaggaggttgtctacccaaaattcatccacgacccttcggaggagctgggc
ctgatgtcgaaccaagagggccccatatccaaccgcctgcccagtgaggggggcagtagc
cttgggggatggggtggctcatcctctggagaacttgactcctggtcctgggatgaggag
gaagatgatggtttaccaccagacggcgtggactctgagcctgcccttccccggcgaagg
cgtagtgaagatgggctcgggagaacagcgaggcatcctcagctggacggggactatgtg
gaactgttggagcccagagtgggtcctgatggaggggttgacacaaggcagaggtacctg
gagatgcatggaatttgtaagaccaagactttgcctctgtgcaggagaggtaaagctatc
aaactccggaaggggaaagcttggggctatgggagactggaagggtcaggaagctttcgt
ggtgtccttggtgccaaaagagacgtagtaaacccaaaaggtgacattttaccacctcga
cctccaccagtcactgaacctggcagagggagacggttttactcctcttctgtccacgac
tctgatgaaggagataaaacaaacagagacactgagggcctggaaagccaccggctttat
tttgatggcccgttcaaagagaggaggcctggcgtgggcaaggagagagatagcaatggc
ctcacacagccgtgcagagacgagcacggaggtaaagactcagagagtggggacagtttg
gtcacaaatgaaatccatgacatgatgaaccacaaggtcgggcatggtatagagggccac
tcagatcatggatctcattcagactctgttttcgaggatacagataaaccactgagcgga
gacagtgatgccaccaccccaacatcagacgcaccagagagaccattcactggagtctta
gaaagtggagagattaccaaaagtggatctaaaataaagagtttgtctcacccaaaggtg
acagaagaaatagatgaaggaaagacagaggacagagtgtgtcccagaggaaaggaagtt
aaaactgcaggattcagagcgccaaggaggaaaaggaagggaaagggggccaaagggagg
gctaggtctggtggtcgtgtacatcaaaagggatcaaaacagcagggtaaagctgctcaa
ccaagtcccaccatctgcgctgctttgacaaagctgccaatcacagaggagaaccagtca
gagcaaagagaacaggcagacgaacctgatggagtgccaccttcaactaatgacgaaaca
gaggacacaaggaaaagcagtgcagagacagaagccaaatctgtgcctgtctgcaatgga
caatcaggcacatccttatttaaccactctaatgaggaggcagggtcaggagagacatgt
cctgaccagctaaatggtgttgcatccaaagagcctcccctgctgagggaattggacaca
gagcttctccagtcaggaaagctaaagttgacaggtacagtagacaggttgggacgtgct
cttgttgtcacagagacagatgcatcagaggagagtttctgtgagcaggagatggcccgg
gtactggcctgctaccacagaatcactcggcctgcagccaaagacaaaggtctcacagtg
ttaatggacagcagacgctctccaccctccactcgcagcctctctgcacttaaattgttc
caggtgttggttcctggcggtcttggatctgttctggttttggtggaagagcagcagggg
tccctttcgcacaacctggaagatgcagagatccacacagtgcgaggaacaggggtcctt
cagcaatatgtagacaagcaacagctgcccaaagagatggacggagacttcacccactgt
cacgcagactggctggtcttcagactaagtctggagagtctgacagagcgttgtgagagc
gccctcgcactcctaggagaagcactgcagtctatggacactgagccaatgccggacaac
atcaagacggttcccctgagcatcgacaaacacagacagctcatggtgagcgtcctggct
gaccaacgtttaactgaactacagcaaaggggcggagcttggcttgcaggactgaccaat
agcgcttctggactggcacagaagtcaccagactgcagggctgctcttgctgtgacctct
aaactctatgacagtgtcgatgacgccctccatcggctggtccgagtgtccaaccagaga
ggtcgcgacctggaagctctgggacgactagcggggctggtggacaaactggaaaagtgt
gataaggagattgagcaggtccagtcacagttggaagactacaaggaccctcctctgtcc
ctcagcagactctcgctcaaacagcagaaattcaagacattcaaagaaacagccaatgaa
ctgcacagtgagactctgtcagtgctcagtgctttggagggctggtgcgagctggactgg
gcaggcctgagcaatgtccagatccgacttccaccagtcagggagaagctgagagacatg
tcccactgtctgtctgactgctggaccaccctggataacacacagaggctgctgtccaca
ttgaccgaggccacccagtggtgcgatgcagtctcctccacctcctcctccccttcgtcc
tcttcttccacctgccctcttgcctccctccctccgatccccccatcccgtttccaggat
gctcgttccttagccatagagctgggcggcggggcgctcctggatctctggacccagaca
gtagagcgctaccagcggactgttgcgcaggttaaaccccggttcctccagtctgacagg
gcccagaatcagggccaggggaaaccaaagacgccttccgccaacagcctgtgggacttg
atgggtcctgagggagagggtgactggggactgggatctggaggatgtgagggggggctg
cagtcctggggatcactggcatcactgttcagaccacagacctgctccacactgaagata
ggagaggagaaagggaataagaaagacggagtggggggaggaagtggaggaggagcaggt
ggagctggaggaggaaagttcctgcagaaccttctgaatcctgcaaagaagagtcccaca
gatgccccgctcccttctaagccccccaggaagcgccacccaagctttgacctccaggct
cttctggctccccgcagaggcacggccacccccaaacccgagtccccggtgggtgggccg
agccgtaattcccccatgtcctggctggggcgacggacgttagctgacccagtaattacc
actagcatggctgcagccatccctggatggggtggaggaggaggggtgttaattcgaggg
gtggaggtcagcagcaaagaggtggtggaccacacggggtcaccacggcaacacgtgctg
ctcgggaggactgagagggagacggggacagatagggccggttcaactgcacaaagtaag
ctgtacctgctctggtgtaggatgctgagttcagagaggcagtatgtggctgtcctgaag
ggggtagaagagacatacctccccttacttgagctctcagacaccccggcctccatcagg
gggaaggcagacaccctcttccccaactgggccagcctcagcaccttccactcgcagaac
ctactccctgccatggagggcgctcttgtgcagagcttgttgcaacaggactgcttcagc
aaatatcgggaccagtttctgcagtattcccactacatcaggactaaactagaactggac
tctccactggtcacacaggctgccgacttctttaagtccaaactccccccagcctccccc
ctctcccctctgtccttccctcactgtcttcaggctcccactcacagactggagcagtac
tgcgaggccctggaggagctgggagggataaaccccgcctctgactccgccctctccatc
ctgagacacgcccagcggcacggcgaggacctcagggccagtgacctcatcgtcggatgt
ccgatccccgtggcggagcgtggcgagctggtgcggcagggcgagctgatggtgtgtggt
ggagctcggaggaagcgtgcgggagtgagaaacgtgttcctctaccagcacgtcgtcatc
ttcaccaaacagaagagccccggcccgggacgcatctcctatagctacaaacacagcatc
aagacaggtgagatgggtctgactcagagcgtgggtgaggaaggagtgaagtttgaagtt
tgggtccgacaggctcctcgaaccagagactgcatcacgctgcaagcgaaggacagggaa
gacagggtgacctggactcatgatattgcccatctgctgtggacacacgccatcaacaac
acagagttgtgtctgaaggagtcactctgcatgggaatttccagtaagctgctactggac
gcgacaggaactccaggctcagagctggactccatctacagtcttaatgacagagtccac
agtagctgctcagactcctcctctgtcggcagtcagaaggaggggggatccccagcgtct
gggagggaccccaggagaagctccggatcaacaagttactcacagagtcagtctccatct
acagctgtgtaa
DBGET
integrated database retrieval system
