Siniperca chuatsi (mandarin fish): 122869804
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Entry
122869804 CDS
T08948
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122869804 (fxr2)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122869804 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
122869804 (fxr2)
mRNA cycle factors
Stress granule specific factors
122869804 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
Tudor_2
DUF150_C
Motif
Other DBs
NCBI-GeneID:
122869804
NCBI-ProteinID:
XP_044039061
LinkDB
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Position
LG22:6176625..6193112
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AA seq
675 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGYIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKEIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNSP
SSRNSFHKVPIPVPEDLRDICANDNIHKDFRKAIGANCIFYSAQTHELIVLSTNETTVKR
ATLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQAREYLEFKEDYFQVPRNLVGKVIGKS
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTASSKEGMVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRTGGPGVDREKGYMTDE
SSNSLHTSRTYGGRGRGRRASNSQYSGYGTNSELSNASESEDTIERDQRPRGIGGDERGS
RRGGRGRGSNSGRGRGGPGSKPSNSISSVLRDPDSNPYSLLEGEGELADTDISEGMGGDR
RRRSRRRRNDQEPSVMDAAAESDSQAGPSENGLDEEARPQRRNRSRRRRNRGNRPEGGST
SRDRQPGESVTVADYISRAESQSRQNLPQKENHAGPEPKENGTSAQMPERTPSKRSPSKG
VTSASETLTLVNGVS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggccgtggaagttcgcggctcgaatggggccttctacaagggttacatc
aaagatgtccacgaagactcactcacaattgtttttgaaaacaactggcagccagagaga
cagttgcccttcagcgacgtgcggttgcctcctccagccgactaccacaaggaaattggt
gaaggagaggaggtggaggtttactccagggccaacgaacaggagccatgtggctggtgg
ctggcgcgggtcagaatgatgaagggagagttctatgtgattgaatacgcggcatgcgac
gccacatacaacgagattgtcacatcagagcgcatcaggccccttaaccccaacagccct
tcctctcgaaactcgttccacaaggttcccatccccgtcccagaagacctgagggacatc
tgtgcaaatgacaatattcacaaagacttcaggaaagctatcggagccaactgcatcttc
tacagtgcccaaacacacgaactcattgtgctgtctacaaatgaaaccacagtaaagcgt
gcaactcttctgagcgacatgcatttccgcagcatccgtaccaagcttatgctaatgtcc
cgcaacgaagaagccaccaaacatttggagacaagtaagcagttagcatcagcataccag
gaggaggtgagggtcagagaggacctgatgggcctcgccatcggctcccatggtgccaac
atccagcaggcaaggaaggtgcctggtgtcacagctatcgagctggaggaggaaagctgc
acattcaggatctacggagagaccccagaggcagtaaagcaggctagagagtatcttgag
ttcaaagaagactactttcaggtacccaggaaccttgtaggcaaagtcatcggcaagagc
ggcaaagtcatccaggagattgtggacaagtcgggcgtggtccgtgtcaggattgaggga
gacaacgacaaaaagcttccccgagaggaggtaggcaggcagggggcaggcagggacgac
actgccagcagcaaagagggcatggttcccttcgtgtttgtgggaactaaagagaacatc
agcaatgctcaggcgttgttggagtaccatgtgtcctatctccaggaagtggagcagctg
cgcctagagcgtctccagattgacgagcagctccgtcagatcggggttgggtaccgcgca
cctcctagtcgaactgggggccctggtgttgaccgggagaaaggctacatgacagatgag
agcagcaattcactccacacctctcgcacctatgggggccgcggcagagggcgcagggcc
tccaacagccagtattctggatatggcacaaactctgaactgtccaatgcttctgagtcg
gaggatactatcgagcgagaccagcggcctcgtggcataggaggcgatgagagaggctcc
agacggggcggcaggggcagaggctctaattcaggacgaggccgtggagggccagggtcc
aagccttccaactccatcagctcagtgctgagggacccagacagtaacccatactccctg
ctggagggtgagggagagctggccgacacagacatcagtgaaggcatgggaggagaccgc
cgcagacgctcccggcgccgccgcaacgaccaggagcccagcgtgatggacgctgcagca
gagtcggacagccaggccggccccagcgagaacggactggatgaagaagccagacctcag
cgccgcaaccgaagccgccgccgtcgtaatcgtggcaaccgcccagagggaggttcaacc
agccgtgacagacagccaggtgagagtgtgactgttgctgactacatatcccgtgctgag
tcccagagcagacagaacctgccccagaaggaaaaccacgctggccccgagcccaaggag
aacgggaccagtgcccagatgcctgagcgaacgccctccaagcgttcccccagcaaaggc
gtgacctcggccagcgagaccctgaccttggtcaacggggtctcgtaa
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