Siniperca chuatsi (mandarin fish): 122870053
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Entry
122870053 CDS
T08948
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122870053 (dennd4c)
Membrane trafficking [BR:
schu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122870053 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
122870053
NCBI-ProteinID:
XP_044039653
LinkDB
All DBs
Position
LG22:9415867..9447801
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AA seq
1898 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINRSAGETVPEGFT
CIDSTYSGQPANLNHGSLKSPELFLCYKRSRGKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSNVFLCYKKSVSASNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTRDPLPVFSTFVLTVSSGEKVYGSAIQFYEPYSVDLLSEKQKIQLGLLTTVEKKMI
PNRPVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYGTLLMNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLVNSLSNLYHQLATVSVRQTGEEGSAV
DMTPIEADFTWHKKKTALEMEIQEAFLRFMASILKGYRSYLKPITQAPSKKATAADSLYD
LQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KGTKVEGESSEDARLLELDESQKSEHTVFVMPPEPSADDGTEPAPKYTYKSFPWLQMELF
DRPRELRPALSSRAAGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWARCLFSHCY
SLWFICLPAAVRLAKSKSRAMQQAYNVLLKMRTTEVEVLDEVCYRVVMQLCGVWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVLRGVAQFKHALH
RTSSKKGSTLSTAAASVGEEHNPFAHSHSMEDTADNHCSTGRQSDQGYGSKDELHKELAE
PSHTAVLSAEERNNSKEQHNGGDIAGSVDSAVAVAEPPSPVDVSSPVPSIVKLSTGSFDG
GRETGTGKLFRRHSTNDNVSLPDDDASLPSGDVSNQPQQQRQKSFAERSCSFSAETRAGM
LLEKGVNHMASQMGADARILAAALCAGQSSTPNSVPKALFKDLEEEPEDDQGLTLGKLPE
EEGPGAPEEGEGDEAKGTEEKLEKRERKHTETLEEDSGLRGASLERADVQAGADPLSILV
TESEESASVTSQEPPRSMPAVVSRNLAEEIEMYMSLRSPLGVKSSSMELQQAQGDSTDAP
QPKLSMERRSSLPVPQVKTPTGSPGDTPKRSPATVSRSKTFAVKTKTPASAMGSPGPRSS
SLTALVKSSQGGSLGSVINSISGIKMDTLLSGPKIDVLKSGMKQAANVASKVWGAVASAY
SYSDDEDEQAQGGGGFPSSLDEHMLAAHEVDGSPEKGAIPGLVANGLNQSCTSLGSSSCS
SDTGRGTHQTHPTPGRVGRGPDSEQGSSLHASSSSIYQNCALEVLMSSCSQCRSCEALVY
DEEIMAGWTADDSNLNTNCPFCRTAFLPLLHVEFHDLRTMPGFYMNPSASGDSIHSTSAQ
PSASSSADIKTPDLITFPEEEPRETPDDQPGTQKSLIPEPVQSDPLGLLEHQQQRCTGTS
LTRSNSVGGPLQSLDYSQRPGHGVSTTSLPCSLQEMSDGMGTKRPNPKPVSVPYLSPLVL
RKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPTHLPGLILTSEHCNNGVQ
LPLTSLSQDTKQVYVQLLWDNINLHQEHGDPLYLLWRTLLEKKGTLAPTDHQEIRTLLNT
IVRNIQTNDVYGPINLLIREIKRRPEGVKRQRSIYREILFLSLVALGKENIDVEAFDREY
RLAYDELSAEQLKSLHRMDRPPSPSVQWCLKCFGTPFI
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggccgggctgacagac
aagtccacgcccctggagcaggacctgtcggagacaaagtccagcgggcccaaagcaccc
atcactgacttggctgtcattaacaggtcggcaggggaaaccgtgcccgagggcttcact
tgcatcgacagtacctacagcggccaaccagccaaccttaatcatggcagtcttaagagc
cccgagctgtttctgtgctacaagaggagtcgagggaagcctcctctcattgacattggt
gtgctgtatgagggtaaggagcgactgatccagggctgtgaggtcatccaggccacgccg
tacggccgctgcgccaacgtcaacaacagctctgccacctcgcagcgcatcttcatcact
ttccgccgagcaccgcccgtccagcctcagaactcccttgcagtgacagacatctgcgtc
attgtcaccagcaagggcgagaccccaccacataccttttgcaaggtggacaagaacctc
aattgtggcatgtggggctccaatgtgttcctgtgttacaagaaatcagtatctgcgtcc
aattccatcagttacaaagctggtctcatctttcgttacccagaagaggactatgagtct
tttcctctgtcagaatctgtccctctgttttgtttgcccatgggtgccaagatcgagtgt
tgggcaccaaacacacgtgatcctctgcctgtcttctccacgtttgtcttaaccgtctct
tctggtgaaaaggtgtatggatcagccatccagttctacgagccatattcagtggatctg
ttgagcgagaagcagaagatccagctgggcctgctcaccacggtggagaagaagatgatc
cccaaccggcctgtaaacaccaacaaatgcatctgcctgctctcccgctggcccttcttt
gagtccttccgcaagttcctgatgttcctctacaagctctccgtctcaggcccacaccca
ctgcctattgaaaagcacatctcgcacttcatgcacaatgtgtcatttccttcccctcaa
aggccaagaatattagtccagctctcggcacatgacactttgatcctctcccagcctgtg
tgtacacccttacccctcagcggggcagactacggcacgctgctgatgaatctgggctct
gagaactgcgccacgctgctgcactttgtcctgctggagagcaagattctgctgcactca
ctccggcccgctgtactcaccggagtggccgaggctgtggtggctatgattttccccttc
cagtggcagtgtccttacatccccctgtgcccgctctctctagcaggcgtcctcaacgct
ccttgtccatttatagtgggtgtggactcccgctacttcgacctttacgaccccccgcca
gatgttgtctgtgtggatctggacaccaacactatttacctgtctgatgaaaaaagacac
agcaactggaagaacctcccaaagaagccatgcaagagtctcgttaactcactgagcaac
ttgtaccaccagctggccactgtttcagtacgtcaaacaggcgaggaaggctcagcagtg
gacatgacccccatcgaggcggacttcacctggcacaagaagaagacggccctggagatg
gaaatccaggaggccttccttcgtttcatggcgtccatcctgaagggctaccgctcctac
ctcaaacccatcacacaggcgccctccaaaaaggccacggccgcagactccctctatgac
ctgcaagggtttctcaaaagcagagaccgcgcccaccagaagttctactcccagctcacc
aagacccagatattcatccgcttcattgaggagtgcacctttgtcagtgacaaggacact
ggcctggccttttttgacgactgcgtggagaagctttttccctctgataaaatcaccgac
aagggcaccaaggttgaaggagagtcatctgaggacgcgagactgctggagctggacgag
tcccagaagagcgagcacacagtctttgtcatgccccctgaaccttcagctgacgatgga
actgaacctgcccccaaatacacctataaaagtttcccctggctgcagatggagctgttt
gaccgtcctagggagttacggccagcacttagcagcagagcggcaggggccagtctgtcc
agcagccctgcactactggctaagaggacgaagcaggagatcaagctagcatacaaaatg
gctaagcggttctactccaaccctccgctgtgggcccggtgtctgttcagtcactgctac
agcctgtggttcatctgcctgccagcagccgtgcgactggcaaagtctaaaagtcgtgcc
atgcagcaggcgtacaacgtcctcctgaagatgaggaccactgaggtggaggtgctggat
gaggtgtgttacagagtggtgatgcagctctgtggtgtgtggggtcttcctgttatggct
gtgcgagtcctggttgagatgaagaaagctggagttcatcccaacgccatcacatatgga
tattacaacaaggccgtcttagagagcccgtggccgagcagaaaccgtagtggcctgttt
atgtggaccaagcttcgtaatgtgcttcgtggagtggcccaattcaagcatgctctacac
cgaacatcttccaagaaggggtccacacttagtacagcagctgcatcagtaggtgaggaa
cacaacccatttgcccacagccacagcatggaagacacagcagacaaccactgtagtaca
ggaaggcagtctgatcaaggctatggctccaaggatgagttacataaggagctggcagag
ccttcacatacagctgtcctttccgctgaagagagaaacaattccaaagaacagcacaat
ggaggtgacattgcgggctcggtggacagtgctgtagcggtagcagagccccccagtcct
gttgatgtgtcctcgcctgtccccagtattgtgaagctgtccacagggagctttgatggt
ggcagggaaacaggtacagggaagctattcaggagacacagcacaaatgataacgtgtct
ctccctgatgatgatgcctcgctgccatcaggggatgtatctaaccagcctcaacagcag
cggcagaaatcctttgctgaacgcagctgtagcttcagcgctgaaacccgcgctgggatg
ctccttgagaaaggcgtgaaccacatggccagtcagatgggtgccgatgcccgcatcctg
gctgcggcgctctgtgcgggccaaagttcaacccctaatagtgtgcccaaagcacttttt
aaagacctggaggaagagcctgaagatgatcaggggttgacactggggaagctgccagag
gaagaggggccaggggcaccagaagaaggggagggagacgaggcaaagggcactgaggaa
aaactggagaaacgagagaggaagcacactgaaacacttgaggaggactctgggctgcga
ggagcgtccctggagagggcggacgtgcaggcgggtgctgacccactttccatcctggtg
accgagagcgaagagtcggcctctgtcaccagccaggagccaccgcgctccatgcctgct
gtggtgtcccgcaacctggccgaggagatcgaaatgtacatgagcctgagaagccccctg
ggtgtgaagtcctccagcatggagctccagcaggcccagggagactccactgacgcccca
cagcccaaactgtcaatggagcgcaggtccagcctccccgtgcctcaagtcaaaactcca
actggctccccaggcgatacacccaaacgcagccccgccactgttagtcgctccaagact
tttgcagtaaaaacaaagacccccgccagcgctatgggtagcccgggtcctagatcgtcc
tcactgactgcgctggtcaagtcctcccagggagggtctttgggctcggtcattaactcc
atttcaggcatcaagatggacaccctcttgtcgggacctaaaattgacgtgcttaagtcg
ggcatgaaacaggctgcaaatgtggccagcaaagtgtggggggcagttgcttcagcttac
tcctactcagatgacgaggatgaacaagctcagggtggcggcggcttcccgtcaagtctg
gatgaacacatgctggctgcacatgaagtagatgggagtcctgagaaaggagccatccca
gggttggtggccaacggtctcaaccagagctgcaccagcctgggcagcagcagttgcagc
agtgacacaggccgagggacccaccagacacatcctactccgggacgagtgggcaggggt
ccagactcggagcagggctcctcacttcacgcttcctcctcgagcatttaccagaactgt
gcactggaggtgctgatgtccagttgctcccagtgccgctcttgtgaagccctggtgtat
gacgaggagataatggcgggctggacagctgatgactccaacctgaataccaactgtcct
ttctgtcgcacagcctttcttcccttattgcacgtggagtttcacgacttgcgcacaatg
cccgggttctacatgaatcccagtgcctcaggagacagtatccacagcaccagcgcccag
ccctcagccagcagctcggctgacattaagacaccagaccttatcactttccctgaagag
gaacctagggaaactcctgatgatcagcctggaacacagaagagtctgattccagagccg
gtgcagtcggaccccctgggtctcctggagcaccagcagcagagatgcactgggacatca
ctgacgcgcagcaacagtgtcggtggcccgctgcagagcctggactactcccagagaccc
ggacacggcgtctccaccaccagcctgccctgcagtctgcaagagatgtcggatggcatg
gggactaaacggccaaaccccaagcctgtgtccgtaccgtacctcagccccttggtgctg
cgcaaggagctggagaccctgttggagaatgagggagatcaggtgatctacacccacaag
ttcctcagccagcaccccatcatcttctggaacctggtgtggtatttccgtcgcctggac
ctgcccactcacctacctggtctcatcctcacctctgaacactgcaacaacggagtacag
ctgcccctgacgtcactgtcccaggacactaagcaggtatacgtccagctcctgtgggac
aacatcaacctgcaccaagaacatggagatcccctctacctgctctggaggaccttgttg
gagaagaaggggacgttggctccgacagaccaccaggagattcgtaccctcctcaacaca
attgttcgcaacatccagaccaatgacgtctacgggccaatcaacctgttgatccgagag
atcaaacggcgcccagagggtgtcaaacggcagaggagtatctatagagaaatattgttc
ctctcactggtggccttggggaaggagaacatcgacgtagaggccttcgacagggagtac
cgcctggcttacgacgaactgagcgctgagcagctcaagtctttgcaccgcatggatcga
ccgcccagccccagcgtccagtggtgccttaaatgctttggaacccccttcatctga
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