Siniperca chuatsi (mandarin fish): 122870326
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Entry
122870326 CDS
T08948
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122870326 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122870326 (cnga1b)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122870326 (cnga1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
DUF3043
Sec62
MDM10
GmrSD_N
CDC45
PIP5K
PFF1_TM
ALMT
ADI
CLN3
AAA_11
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
122870326
NCBI-ProteinID:
XP_044040417
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Position
LG22:complement(23609609..23620955)
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AA seq
665 aa
AA seq
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MAKVAPSVPPPISRLTPPTIVLQDMEQEPGEVREGDRATQKTGPGLLFNVNNSNNNEEEE
EKKKKKKEKKERKEKKQKEKQEKKERKEKKQKEKEEKEKEKEKEKEKEKEKEKEKKAKEE
APKEIDVIDPAGNTYYYWLFVITIPVMYNWTLIIARACFEELQTDYVVYWFILDFISDVT
YIADMIFRTRTGYLEQGLLVKEEQKLRDRYMNSFQFKLDLVSMIPTDVLYLVFGLTYPEI
RLNKLFRFNRMLEFFQRTETRTNYPNALRISNLVMYIVIIIHWNACLYYSFSKAVGFGAD
RFVYPDPADPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFA
TIVGNVGSMITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDE
REVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKG
DIGREMYIIKEGKLAVVADDGIKQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGY
SDLFCLSKDDLMEALTEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEIEEKVERM
TSTLDILQTRYARLLAEHEATHSKLKHRVTRLEKKLVPPPRADQPGDAPPPPTPETQTTK
EEEKK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtagctccatcagtcccaccccccatctccaggttaactccgcccaccatc
gttctccaagacatggagcaggagccaggtgaagtcagggagggggacagagccactcaa
aaaactggaccaggacttctgtttaacgtcaataacagcaacaacaacgaagaagaagag
gagaagaagaagaagaagaaagagaagaaagagagaaaagagaagaaacagaaggagaag
caggagaaaaaggagaggaaggagaagaaacagaaggagaaagaagagaaggaaaaggag
aaagagaaagaaaaagaaaaggagaaggaaaaggaaaaagagaagaaggccaaagaggag
gctcctaaggagatcgacgtgattgatccggcaggtaacacctactactactggctgttt
gttatcaccatccccgtcatgtacaactggaccctgatcatagccagggcgtgtttcgag
gagctacagactgactatgtggtctactggttcatcctggactttatctccgacgtcacc
tacatcgctgacatgatcttcagaacgaggaccggttatctggagcagggtctactggta
aaggaagagcagaagctgcgtgaccgctacatgaacagcttccagttcaaactggacctg
gtctccatgattcccaccgacgtgctgtacctcgtctttggcctcacctaccccgagatc
cgcctcaacaagctcttcaggttcaacaggatgctggagttcttccagagaacagagacc
aggactaactaccccaacgctctccgtatctccaacctcgtcatgtacatcgtcatcatc
atccactggaatgcctgcctctactactccttctccaaggcagtcggttttggtgccgat
aggtttgtgtatcctgacccggcagatccagagtttggtcgtctggtgaggaagtatgcc
tacagtatgtattggtccacgctgacgctcaccaccattggagaaactccacccccggtg
gagaactctgagtacttctttgtcgtcactgacttcctggttggtgtgttgatctttgcc
accatcgttggtaacgttggttcgatgatcaccaacatgaatgctgccagagccgacttc
caggctcgcattgacgccataaaacagtacatgagcttccgaaaggtaactaaggacctg
gagaagcgagtgatcaagtggtttgacttcctgtggaccaataagaaagcagtggatgag
agggaggtgttgaagtacctgcctgacaaactgagagccgagatcgccatcaacgtccac
ctggacaccctcaagaaggttcgtatctttgcagactgcgaggccggtctgttggtggag
ttggtgctgaagctgcagcctcaggtctacagtccaggagactacatctgtaagaagggt
gacattggcagagagatgtacatcatcaaggagggaaaactcgctgttgttgctgatgat
ggtatcaagcagtttgtcgtcctgagtgatggaagctactttggcgagatcagcatcctg
gctattaaaggcagtaaggcaggaaacaggaggacagccaacatcaggagcattggttac
tccgacctcttctgtctttccaaagacgacctgatggaggcgctaacagagtatcctgat
gctaaagctctgttggaggagaagggaaggcagattctgatgaaggatggactgctggac
ctggaggtggcagcgcagggccccgacccgaaagagatcgaggagaaggtggagaggatg
acgagcacgctggacatcctgcagacacgttatgctcggctgctggctgagcacgaagcc
actcacagcaaactcaagcatcgagtcaccaggctggagaagaagctggtaccaccgccg
cgagccgaccagccaggtgatgctccgccccctccaacacctgagacacagacaactaaa
gaagaagagaagaagtag
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