Siniperca chuatsi (mandarin fish): 122870371
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Entry
122870371 CDS
T08948
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu02010
ABC transporters
schu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122870371
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122870371
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122870371
Transporters [BR:
schu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122870371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
122870371
NCBI-ProteinID:
XP_044040430
LinkDB
All DBs
Position
LG22:11527821..11693390
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AA seq
2246 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVIEVLWPLFLFFILVWVRSTNKPLYKGQCHYPNKA
MPSAGVLPWLQGMMCNMNNPCLDYPTPGETPGQVNNFNNSIIAGMLIELQTLLVNRSILS
KAQLLADDLNQWASVLSQSNPAQPVILRSILRDNETFSTHLKGNLSVPPAVVQSLMNAEI
QLNPMMGIPRPDNLRRILCEGTDLDEYVQFSSQAEKEAFQNVSCFRTPEQLINTQQVLLQ
NLDARKVLSELPSALALNPADTATLMRKTTLDALPVIEEMARLQNSMIFKAASSLDFQRD
MIGSINMLLCEKQPGFNSTNMPISLRSPRQMANNESTSIMGNSSDAFCQTLVNTLEGTPG
LRYVWSTFKPLLQGKVLYTPDTPAARLMVKEANSTFNALAMLKELADLWDELGPRIWNFL
QNSPQVSSIRALLANPVFAAVLNQRLNSTGWTAELLANFLYNGPPEDRPPGMPPYDWRDV
YNTTTQTLKLLSNFLGCLDLNKFEAAPTEGHLVRKALELLKNDTYWAGVVFENLQPDSSH
PPSYVKYKIRMDIDEAERTNKVKNRLWSPGARDNSFNDLRYIWGGFAYLQDMMDHGIIRV
QTSKTQPLGIFAQQMPYPCFVDDVFIQSIGGILPMFLVLAFMYTVCMTIKGLVLEKELRL
KEVLRAVGIQNGALWSARFTENIVLLIAPCVLISVMVKYGKVLQYSDPSVIFVFLLVFCL
TTITQCFFISVFFSKANLAAACGGLIYFVLYLPYILCYAWRDVMGFRAKVVVSLLSCVAF
GYGCENFSKYEVQGIGIQWYNINKSPEEGERYTFIVSIIMMLFDAAFYWLLTWYIENVFP
GQYGIPKPWYFPFTASYWCGTASVTDIDPDLQKDSTVHNEYLEKPPPNMKAGVSIHNLVK
IYKTGKKLAVDGLSLDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYNIQT
DMDSVRKYLGMCPQHNVLFNELTVEEHIYFYARLKGLSRDEVKIEMDQMIKDVGLLHKRK
DLAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILS
THHMDEADILGDRIAIISHGKMRCCGSSLFLKKCFGSGYYLTLVRDGTEKMTAQRNGIVH
SQAKEGKECPSRSSSPDDGIGSQSWGNSDPSDLTAVGQLVRRHVPEAVFLESIGQEITYI
LPYGGARDGTFALLFQELDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEIPPTKEL
LVRDCKRSSRASKRNSIASVHIKTEQVSGMNELKGKFTSKVEDLKRNASVSGRGSTVITG
WELIRRQFLALFIKRFHNARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFTEYPSLELQP
WMYGLPQTTFYSNDGPDNVEVSQVVETLVNNPGFGTRCMNGDPIPKLPCSSSGSDWFTPS
VDQSVTDIFLNGNWSMSNPSPSCQCSTPKRTIMLPDCPLGAGGLPPPQRIQNTTETLLDL
TGRNMTDFLVKTFEHSGKSRYGGISVGAVNSQVRLTEGAIEAAFSDLKDLFILFQDNVTD
QIFQKAETLLKKLGTRDNVKVWFYNQAWHGMASFLSVANNAILRGNLAAGQDPHKYGISV
SNHPLNLTKEQLSYVAMATTSTDMVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVS
GVNPAVYWLANFAWDMCNYIIPCLIVIGIFLGFQQKAYVSPANLPALILLLILYGWSITP
MMYPASFIFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDDNVSRINEIVKQVLLIFP
HFCLGRGLIDMAKNQAMATLFSSFGEDRFKDPLSWEMVGKNLCAMFIQGVVMFAITILIQ
YKFFCKPRLISGKSLSAEKEDIDVARERKRVYEGKAQNDLLRICDLTKVYPRKSTPAVDR
LCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRNVHQNMGYC
PQFDAIDDLLNGREHLEFYARLRGVPEKEVTMVAEWGIQKLGLVKYSTKSAGTYSGGNKR
KLSTAIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSIIKEGRSVILTSHSMEECEALC
TRMAIMVNGRFKCFGSIQHLKSRFGDGYTVIVRVGGSPPALTPVEDFVQQTFPGSVLKEK
HHNTLQYQLPYTQGALANIFSQFTIHQQSLGVEDYSVSQTTLDQVFVNFARHQHGDKDSQ
AYVNPVDTSDELPLESVKTSQEAEKV
NT seq
6741 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctagtcattgaagtgctatggcctctgtttctcttcttcattctggtg
tgggtgcgttccaccaacaagccactttacaaaggccaatgccactacccaaataaagcc
atgccatcagctggagtgctgccctggcttcaaggtatgatgtgtaacatgaacaatccc
tgtttggattatccaacgccgggggagacaccaggccaagtcaacaacttcaacaactcc
ataattgctgggatgttgatagagctgcagaccctcctggtgaacagatctattctcagc
aaggctcagttgctggcagatgacctcaaccagtgggcttctgtcctgtcacagtctaac
cctgctcaaccagtaatcctaaggagtattctgcgagacaatgaaactttctccactcat
ctgaaggggaatttgtcagtgccaccagcagtggtccagagccttatgaatgctgagatt
cagctcaatccaatgatgggcatcccgaggccagacaacctgaggcgcatcctgtgtgag
gggacagatctggatgagtatgtccaatttagcagccaagctgaaaaggaggcttttcaa
aatgtcagctgcttccgcactccagagcagctgattaacacccagcaagtactcctgcaa
aacctggatgcaaggaaagtgctttctgagctaccttcagctttggctctgaatccagca
gacacagcgacactgatgaggaaaaccactctagatgcgttaccagtgattgaggagatg
gccaggttacagaactccatgatctttaaggctgctagttcactggatttccaaagggac
atgattggcagtatcaatatgttactgtgtgaaaaacagcctggcttcaattccaccaat
atgcccatcagtttacgctcacctagacagatggctaacaacgagtcaacctccattatg
ggcaacagttccgatgctttttgtcagactcttgtcaacaccctcgagggcacacctggt
ctgcgctacgtttggagtaccttcaagccgttactgcaagggaaagtcctctacacacct
gatacacctgctgctcgcctcatggtgaaagaggcaaatagtacattcaacgctttggct
atgcttaaagagctcgctgatttgtgggatgaactcgggccacgtatctggaatttcctt
caaaatagccctcaagtcagttcaatacgggctctgctcgcaaatccagtgtttgctgct
gtcctcaaccagcgtctcaacagcacaggatggacagccgagctgctggccaacttccta
tacaacgggcctccagaggatcgtccacctggcatgccaccctatgactggcgggatgtt
tacaataccactacccaaaccctgaagcttctgtccaacttccttggttgtttagacctg
aataagtttgaggcagcccccactgaaggccatctggtgagaaaagcactggaacttctg
aagaatgatacgtactgggctggtgttgtctttgaaaacctccagccggactccagccac
cccccttcttatgtcaaatacaaaattcgcatggacatcgatgaggcagagcgtaccaac
aaagtgaaaaacaggttatggtctcccggggccagagacaactcctttaacgacctgcgc
tatatatggggaggcttcgcctacctgcaggatatgatggaccatggcattatacgagtg
caaacgtcaaagacccagcccctcggcatttttgcacagcaaatgccatacccttgcttc
gtggatgacgtcttcatccagagtattggaggcatcctcccaatgttcctggtgcttgcc
ttcatgtacactgtgtgcatgaccatcaaaggcctggtgctggagaaggaactgcggctc
aaggaagtgctgcgcgctgttggcattcaaaatggtgccctttggtctgcaaggttcaca
gagaacattgttctgctcattgctccctgcgtgctcataagtgtcatggttaagtatggc
aaagtgctgcaatacagcgacccctcagtaatctttgtcttcctgctggtgttctgcctg
accaccatcactcagtgcttcttcattagcgtcttcttctctaaggccaacttagcagcg
gcgtgcggcggcctcatctactttgtcctctacctgccgtacatcctttgctatgcctgg
agggacgtcatgggtttccgggccaaggttgttgtgagtttattgtcatgtgtggccttt
ggctatggctgcgagaacttttccaagtacgaggtgcaaggcatcggtattcagtggtac
aacattaacaagagtccagaagagggagaacgctacaccttcatcgtgtccatcatcatg
atgctctttgatgctgctttctattggctgctcacctggtacattgagaatgtctttcca
ggccaatatggaatccctaagccatggtacttccctttcactgcatcttattggtgtggg
acagcctcagtgactgacattgaccccgacttgcagaaggactccactgtacataacgag
tatctggagaaaccaccacccaatatgaaagcaggggtctcaatccacaatcttgttaaa
atctacaagactggaaaaaagcttgccgtggacggactgagtctggacttctacgagaat
cagatcacatcttttctcggccacaacggagccggaaaaacaaccacaatgtcaattctg
actggactgttcccacctacatcaggaacagctctcatcaatggatataacatccagact
gacatggacagcgtccgaaagtacttgggaatgtgcccacaacacaatgtcttattcaat
gagctgacagtggaggagcatatctacttctatgcaaggctgaaaggacttagccgcgat
gaggtgaaaattgagatggaccagatgattaaggatgttggtttactacataagcggaag
gatcttgctaagaacctgtcaggtgggatgcaaaggaagctgtctgtggctatagcattt
gtcggcggctcaaaaatcgtcatcttagatgaacctacagcgggagtggacccctatgct
cgcaggggtatctgggaactgctgttaaagtacaaacaaggtcgcaccatcattttgtct
acacaccacatggatgaggcagacatcttaggtgatcgcattgccatcatctcccatggc
aagatgcgttgctgtggctcctcactctttctaaagaaatgttttggcagcggctactac
ctcactctggtccgagatgggactgaaaagatgacagctcaacgtaatggtatcgtacac
agtcaggccaaagagggaaaagaatgtccttcgaggagcagcagccctgatgatggcatc
ggcagccaaagctgggggaactctgatccctcagatttgacagctgtgggtcaacttgtg
cggcgccacgtccctgaggcagtcttcttggagagcatcggtcaggagatcacctacata
ctgccttatggtggagccagagatgggacctttgccctgctcttccaagagctcgacctg
gccatggctgacctcggcctgacgagctacggcatctctgacaccacgctggaggagata
tttctaaaagtggcagaggatacgggagtggatgcagaaataccaccaacaaaggagctg
ttggtgagagactgcaaaagaagctctcgcgcatccaagcggaacagcatcgccagcgtc
cacattaaaacagaacaagtctctggaatgaatgaattaaagggaaagttcacaagtaaa
gtggaagacttaaagaggaacgccagtgtcagtgggaggggatccacggtcatcaccgga
tgggagctgatcaggaggcagttcctggcgctctttatcaagcgcttccacaacgcccga
aggagccgcaagggtctcattgcccaggtggtcttgcctgctgtttttgtgtgcctgtct
ctgatcttctcactcatcgtcccaccattcactgaatatccgagtctggagctgcaaccc
tggatgtacggtctgcctcaaaccaccttttacagcaatgacggcccagataatgtggag
gtatctcaggtggtggaaaccttggtaaacaatcctggctttggaactcgctgcatgaat
ggagacccaataccgaagttaccgtgttcttctagtggctctgattggttcactccatct
gtggatcagtccgtcactgacatcttcctcaacgggaactggagcatgtctaacccctcc
ccctcctgtcagtgcagcacgccgaaacggacgatcatgttacctgactgtccactcggt
gcaggaggactccctccacctcagaggatccagaacacaacagagacattgttggattta
actggacggaacatgacagacttcttggtcaaaacgtttgaacactcgggtaaatcaagg
tatggagggatctctgttggagcggtcaactcccaagtccgtctgaccgagggagcaatc
gaagctgcattcagtgatctaaaagacctattcattttatttcaggataatgtgactgat
cagatcttccagaaggctgagacactgctgaagaagcttggaaccagggacaacgtgaag
gtgtggttctacaaccaggcatggcacggcatggcgtccttcctcagtgtggccaacaat
gcaatcctgaggggaaatctggcggcaggacaggatccccacaagtacggcatctctgtg
tccaatcaccccctcaacctcaccaaggagcagctctcctatgttgccatggccacaacc
tccactgacatggtggtgtccatctgtgttatctttgccatgtccttcattcctgccagc
tttgtccttttcctcatccaagagagggtgaacaaagccaagcatctgcagtttgtcagt
ggggtaaacccagctgtctactggttggccaattttgcctgggacatgtgtaactacatc
atcccatgcttgattgtgattgggatcttcctcggctttcaacaaaaagcctatgtttca
cctgctaacctgcctgctttgattctgctgcttattttgtatgggtggtccatcaccccc
atgatgtaccctgcctccttcatcttcagcgtgcccagcacagcctacgtggtgctgacc
tgcatcaacctcttcattggtataaacggcagcgtggccacctttgttatggagctcttt
gatgatgataatgtctcccgcatcaatgagatagtgaagcaggtgctgctgatattccca
catttctgtctgggcagagggctaattgacatggccaagaaccaggcaatggccaccctc
ttcagcagttttggggaagaccgtttcaaggacccactcagctgggaaatggtgggaaag
aacctttgcgccatgttcatccagggtgttgtcatgtttgccatcacaatccttatccag
tataagttcttttgcaaaccaaggcttatttcggggaagtcattatctgcagagaaagaa
gatatcgatgttgctcgggaacgtaagcgggtgtatgaaggcaaggcccagaacgacctt
ctgaggatctgtgacctcactaaggtataccctcggaagagcacccctgctgtggacagg
ctatgtgtgggcgtgcctgccgcagagtgtttcggcttgctgggaatcaacggggctggg
aaaaccaccacgttcaagatgctgacaggagacatcccagtctccagtggagaggccttc
ctaaatggatacagcatacgaacagaaatgagaaacgtgcaccagaacatgggctattgt
ccccagtttgatgctattgatgacctgctgaatggacgagagcatctggagttttacgcc
aggttacgaggggtaccagaaaaagaggtcaccatggtggccgagtgggggatccagaag
ttggggctggtcaaatattccaccaagtcagcaggaacctacagcggtgggaacaaacgc
aaactttctacagcaatagccctgatcggttgtcctcctgtgatttttctggatgagcca
accactgggatggaccccaaagcccggcgctttctgtgggactgcatcctgagtatcatc
aaagagggacgctcagtcattctcacatcacacagtatggaggagtgtgaagcactgtgc
acacgcatggccatcatggtaaacggtcgcttcaagtgtttcgggagcatccagcatctg
aagagcagatttggtgatggctacacagtgattgtgagggttggtggctctcctcccgca
ttgacgcccgtcgaggacttcgtccagcagaccttcccaggcagcgtcctgaaggagaag
catcacaacacactgcagtatcagctcccatacacacagggagctttggccaacatcttc
agccagttcaccatccatcagcagagtctgggtgtggaggactactctgtgtcccagacc
actcttgatcaggtttttgtgaattttgcaaggcaccagcatggggacaaggactctcag
gcctatgtcaacccagttgacacttcagatgagctgccattggagtctgtgaaaacctcc
caagaagcagagaaggtgtaa
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integrated database retrieval system
