Siniperca chuatsi (mandarin fish): 122870378 Help Entry 122870378         CDS       T08948                                  Symbol focad Name (RefSeq) LOW QUALITY PROTEIN: focadhesin   KO K27498   focadhesin Organism schu  Siniperca chuatsi (mandarin fish) Brite KEGG Orthology (KO) [BR:schu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:schu03019]     122870378 (focad) Messenger RNA biogenesis [BR:schu03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      122870378 (focad) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Focadhesin DUF3730 DUF4518 Motif Other DBs NCBI-GeneID:  122870378 NCBI-ProteinID:  XP_044040440 LinkDB All DBs Position LG22:3015668..3074489 Genome browser AA seq 1809 aa AA seqDB search MENLKMRFDFPSPVIQAQTVRNLVGAVLKEKGPNGKITQSSTQGPALEALWQQCCTDCAL VRSACCDAVVLLVDQGHADLHYVLNSVLNLLPSARNVQGLIKVIGRLLQMLADQRDGETH FTCPYSIRSSPHPYITALENRVECWPALLLEINDFIQQAADRNEPAYITMLAPFLRYLYC EPQRQPQHALLRHSLLRVLLPIHPGAGSVLQNKDQDQEQSSPVSDSLLHCLCQLVPHMQV DSVEAVLELCGFIDALLQGLVLASEERWRTQRAGLLLQLLCACQRCLRFNGDCRPLLNSL QRFLPACQQGLPLDELLMGVALLLLEAPAAQQTSLLSLALSLVPEQAELSPWLSPVLVLP VLQLLSCSGLIEPLADRRTHSLNQDLAHSLLRSISRETDKPREFGPQLELPLSSWYSELS VALSILCKVADDPAAAADWLLSVSSALSSSQRQLSSLTLIVTHLIITGQEDVCQLALNAS QAIAAADPCQVPSLIPVLLFKLGKETNPGLAHAVLNCLPNLGTHKLCVPVVLQTLHRLAS APKLRAVAMRLMTALWKKQDRIYPELQRLLGQQDSRVVVGRDAQWEQILARAACLRDICR ERPYQHGGDMLAAITLTLNQCTRPDMATPAALALQGLQELCRAEVVDIISTWRSLGPQLS CDPRPLMVKVIAELLALVPQLIVKSEEYEKLKEEVVSFLWNYAVSKDPEVASCGYKALAD FPEAAHTINLLPEAARPATKLPEDEDDEQGKEKEGEEKDLSILGSSYVKLMALTPVSVLP AFELFLTSLVKQEMSQMPRGVYFSALRXGDLRSDQGKTMAGIPSFMLKTYEKNKQPGLKP GLAAGLLLCYELPVQTDRNGRPIDRFLISRSRSYQQTLAALIHEVNIQPSEWHRALLLPR AWRGFMSRAFHAILQGRRADLEMQQKQGKENPQELQYKQHCAWLWARDQLADVIKAATKD SPVVQGNSILALSGLAAVLAKYESNLPADSDGSLGAGPEFVPTASWLAMVLNTLLSISSS SYKARGQVFPWFLHRSYSGENTASAIARSCASLALSLLVPVLVVWQRDGLVQVLSALQAG LPGSPTADDSQAVQFHSGLALGMVLSSLHHQRLSDVSVQKDAELLLSSLDALESCSFNPN LEYNSGCMLGLGLVLAALCGSGQTDQHVQVTQTLDKLLSNLQDSNGRGRMLQEVLAYSVA CVGVSAFSGGLIDAAKAEEVMNTLRTLTEESQQTPGFSLALGLVVHGLSMSGHGKAEDIH PRLLAAWIKILLAEGCPTMQRLAAVNGLVALVGSESYLIQLMRELELSSQQQSRLNEVIR AITQIITFSGAIGLQSNSACLVGHLHLAHMSSSHSHTAVPQDFSYLSEKSVIRPIIDFIT EAGKKGPEFAHPSLVKTALTPLASVGASFQYPPINWSAVLSPLMRLSFGEDVQHQCVVLA VCQAQSSQSASLFLASWLSPPLVHSLSYQTRAQLYESLGLWMKHVAEDKLQVYVESLGLQ QFQEDLRPQRLPLCRSLLQGLAQAMALPNPPNHCWTILRSTTEKIFTLLPNQIQDNEVDL YVGIAKCLSEMSDTEIERIARVTESQMEKTCFVLAYLTSQGRVPLLGLNDIIAGVLRSWP SRKVGWLLLQTFYQCRLATNSNTGVLKRMEWLLELMGHIRNVAYGATSVTCGDTKLATDF LFQVFAAAVVSWGDHFMPLLLGIRAQWFPWQPGSKPQTLQHSLYGEESFTVHALSQCLLG MSHSLPLLLDKEPWSSQTHKFIDWLLSITEGPEQSLSATTISTAKAALLALKSSAEFKKK AVWTRAYGW NT seq 5430 nt NT seq  +upstreamnt  +downstreamnt atggagaatttgaagatgcgatttgatttccccagccctgtcatacaagcccagacggta agaaatctcgttggtgctgtgctaaaagagaaagggccaaatgggaaaatcacgcagtct tccacacagggtccagcgttggaggctctgtggcagcagtgttgcactgactgtgctctg gtgcgttcagcctgctgtgacgctgtagtgctgctggtggatcaaggccacgcagacctg cactatgtcctcaacagcgtgctcaatctcctgccctctgccagaaatgtccaggggctg ataaaggtcattggacggctgctacagatgctggcagaccagagagacggagaaacgcac ttcacctgtccttattctatcaggagcagccctcacccatacatcacagccctggagaac cgagtggagtgctggccagctctgctgctggagattaatgacttcattcagcaggcagct gacagaaatgaaccagcctacatcaccatgctagcccccttcctgcggtacctgtactgc gaacctcagaggcaaccccagcacgccctgctgcgacacagtctcctcagggtgctgctg cccatacatccaggagctggatcagtcctccagaacaaggaccaggaccaggagcagagc tccccagtgtctgacagcctgctgcactgcctctgtcagctggtgccacacatgcaggtg gacagtgtggaggcggtgctggagttgtgtggattcatagacgctctgcttcagggtctc gtcctggcctctgaggagcgctggaggactcagagagccgggttgcttctgcagctgctc tgcgcctgccagcgctgcctcaggttcaatggagactgccgacctcttctcaactcacta cagcggttcctgcctgcctgccaacaggggctgccattggacgagcttttgatgggtgtg gccttgctcctgctggaggcccctgcagctcagcagaccagcctgctcagtctggcgctg agtttagtccctgagcaggctgagctgtcgccctggttgagtccagtcctggttcttcct gtgctgcagctcctgtcctgctcgggcctcatcgagccgctggctgaccggcggacgcac agcctcaaccaagacttggcccacagcctgcttcgcagcatcagcagagagacagataaa ccccgagagtttggtccacagctggaactccctctcagttcctggtacagcgagctcagc gtggctctatccatactgtgtaaggtggcagatgatccagccgcggcagccgattggctg ttgtcggtcagctctgccctgtcgtccagccagcgccagctctcctccctcaccctcatt gtgacccatctcatcatcacgggtcaggaagacgtctgccagctggctctgaatgcgagc caggccatcgctgcagccgacccctgccaggtcccttcccttattcctgttctgttgttc aaactggggaaggaaacgaatccaggcctggctcacgctgtgttgaactgcctgcctaac ctcgggactcataagctctgtgtcccagtggtgctgcagactctccacaggctggccagc gcccccaagctgagagcagtggcaatgcgcctcatgactgctctttggaagaaacaggat cgaatctacccggagctgcagcgtctgctgggccagcaggacagtagggtggtggtggga agggacgcccagtgggagcagatcctggccagagccgcctgcctcagggacatctgcaga gagaggccttaccagcatggaggtgacatgttggctgccattacacttactctgaaccag tgcaccagaccagacatggcaacccctgctgccctcgccctgcaaggactacaggagctg tgccgggcagaggtagtggacatcatctcaacatggagaagtctcgggccccagctgagc tgtgacccccgtccactgatggttaaagtcatagctgagcttctggctctggttccccag ctcattgtcaagtcagaggagtacgagaaactgaaagaggaggttgtcagctttctctgg aattatgctgtgagcaaggatccagaggtggccagctgtggctacaaggctttggcagat tttcctgaagcggcccacacaataaatctccttcctgaggcagccagaccagctacaaag ctccctgaagatgaggacgatgaacaggggaaggagaaagagggagaagagaaggatctc tccatcctaggttcatcttatgtgaagctgatggctctcacccctgtatctgtcctacca gcctttgagctcttcctgacctcactggtgaagcaggagatgagccagatgccacggggg gtatacttctctgccctgaggnngggggacctgcgttcagaccagggtaaaacgatggca ggaattccatcattcatgctgaaaacctacgagaaaaacaagcagcctgggctaaagcct ggactagcagctggacttctgctctgttacgagctgcctgtgcagacggaccgtaacggc agaccaatcgatcgtttcctcataagccgcagccgcagctaccagcagaccttggcagcc ctcattcatgaagtgaacattcagccatctgaatggcaccgtgctctcctcctgccccgg gcctggcgaggattcatgagccgagctttccacgctatcctgcagggtcgacgtgctgat ttggagatgcagcagaaacaaggcaaagaaaacccgcaagagctacagtacaaacaacac tgtgcctggctttgggccagagatcagctggcagacgttatcaaagctgctacaaaggac agtcctgttgttcagggaaactccatcctggctctgagtggcctggctgctgtcctcgct aaatatgagagcaacctgcctgctgatagtgacggcagcctcggggctggaccagagttt gtgcccacagccagctggttggccatggttctcaacaccctgctcagcatcagcagcagc agctacaaggccagaggacaggttttcccatggttcctacatcgttcctactcaggtgag aacacggcgagtgccatagctcgctcctgtgccagcctggcgttgtcactgctggtcccg gtgctggtggtgtggcagagggacggtctggtccaggtcctgtcagcactgcaggccggc ctgccgggctcccccaccgcagacgactcccaggctgttcagttccactctggcctcgcg cttggcatggtgctgtccagtctgcaccaccaacgcctcagtgatgtctctgtgcagaag gacgctgaactcctcctcagctctctggatgctctggaaagttgctccttcaaccccaac ctggaatacaattctggctgtatgctaggtctgggtctggtgcttgcagctctctgcggt agtggacagacggaccaacatgtccaagtcacccaaacactagacaaactattgtccaac ctgcaggacagcaacgggcggggacgcatgctgcaggaggtcttggcgtactctgtggca tgtgtgggcgtctcagccttcagcggaggccttatagatgctgccaaggctgaggaggtc atgaacactctgcgcaccctgactgaggagagccagcagactccaggcttctccctggct ctagggttggtggtccacggcctgtcaatgtccggccacggtaaagcagaggacatccat cctcgtctgctggctgcttggatcaagatcttactggccgagggttgtcccactatgcag cgactggctgccgtcaacggcctggtggctttagtaggatctgagagttacctcattcag ctaatgagagagttggagctttcctcccagcagcagagcaggctgaatgaggttattcga gccatcacgcagatcataacgttctcaggagccattggtttgcagtccaacagtgcttgt ttggtgggtcatttgcatttggcccatatgtccagcagccacagtcacacagcagttcct caggatttcagttacctctcagagaaaagtgtcatcagacccatcattgacttcatcaca gaggcaggaaaaaaaggtccagagtttgcccacccatctctagttaagactgctctgacc cccctggcatcagttggagccagtttccagtacccacccatcaactggagtgctgtcctg tctcctctgatgaggctcagtttcggagaggacgtacagcatcagtgtgtggtgctggca gtgtgtcaagctcagtcttctcagagtgcctctctctttctggcctcctggctgtcaccg ccccttgtgcacagtctcagttaccagactcgggctcagctgtatgagagcctgggcttg tggatgaagcatgttgctgaggacaagctccaggtctacgtggagagtctgggcctgcag cagttccaggaggaccttcgaccccagcgtctgcccctgtgccgctccctgctgcagggc ctcgctcaggccatggcccttccaaacccccccaaccactgctggaccatcctccgctcc accacagagaagattttcaccctcctgcctaaccaaatccaggataatgaagtggatttg tatgtgggaatcgccaaatgtctgtctgagatgtctgatacagagattgaaagaatcgct cgagtcacagagtctcagatggagaagacctgctttgtcctggcatacttgacctcccaa ggcagagttcccctcctgggtctcaatgacatcattgccggtgtgcttcgtagttggcca agccgcaaagtcggctggctcctcctgcagactttttaccagtgtcgcctggccaccaac tccaatacaggcgttttgaaacgaatggagtggctcctggagctgatgggacacatccga aatgttgcctatggggcgacctccgtcacgtgtggagacaccaaactggccacagacttc ctgttccaggtttttgctgctgctgtagtttcctggggtgaccacttcatgcccctcctc cttggcattagggcccagtggttcccatggcagcctggctccaagccccaaactctacaa cacagtctgtacggtgaggagtcattcactgtccacgccctgtcgcagtgcctgctggga atgtcccacagcctgcctctgcttctggacaaagagccctggagcagccagacacacaag ttcatagactggcttctcagtatcacagaaggtcctgaacagagtctgtcggccacaacc atcagcacagccaaagctgccctgttggccctgaagtcctctgctgagttcaagaagaaa gctgtgtggaccagagcatacggctggtag

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