Siniperca chuatsi (mandarin fish): 122870390
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Entry
122870390 CDS
T08948
Symbol
rab39bb
Name
(RefSeq) RAB39B, member RAS oncogene family b
KO
K07925
Ras-related protein Rab-39B
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122870390 (rab39bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122870390 (rab39bb)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
schu04031
]
122870390 (rab39bb)
Membrane trafficking [BR:
schu04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
122870390 (rab39bb)
GTP-binding proteins [BR:
schu04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
122870390 (rab39bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
122870390
NCBI-ProteinID:
XP_044040466
LinkDB
All DBs
Position
LG22:complement(17765032..17780472)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVSRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatggctctatcagttccggctgatcgtcatcggggactccacggtgggc
aagtcgtgtctgatccggcggttcacagagggccgcttcgcccaggtgtcggaccccacc
gtcggcgtggacttcttctccaggctggtggagatcgagccgggcaagcggatcaagctg
cagatctgggacaccgcgggtcaggagcgcttcaggtccatcaccagggcttactaccgt
aactctgtgggcgggctccttctgttcgacatcaccaaccgccggtccttccagaacgtc
catgattggctggaggaggctcgcagccatgtccagccacacagcatcgtcttcctattg
gtggggcacaagtgtgacctggaggcacagcgccaggtgagccgtcaggaagcagagaag
ctggcgggggcgtacgggatgcgctacgttgagacgtcggcccgtgacgccatcaatgtg
gagcatgccttcaccgagctgaccagagacatcttcgccttggtgcggtccggcgatatc
acaatccaggagggctgggagggcgtgaagagcgggtttgtccccaatgtggttcactcc
tcggaggaagtgaccaagagtgaccgccgctgtctatgttga
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