Siniperca chuatsi (mandarin fish): 122870717
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Entry
122870717 CDS
T08948
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122870717 (sorcs2)
Membrane trafficking [BR:
schu04131
]
Protein recycling
Others
Others
122870717 (sorcs2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
SorCS_stalk
PKD
PKD_4
InlK_D3
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
122870717
NCBI-ProteinID:
XP_044041026
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All DBs
Position
LG22:complement(4294123..4661233)
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AA seq
1163 aa
AA seq
DB search
MASLRPEEPISAFTNLCLFLLTASAWMALPGPVRCDSGALNQRGGEDRTFGIGGGDGGSP
PGLPTVGDEEAVGAKSSPRFRRALSREKQMSLLSSSFVLKGDATHNQAMVHWTGENSSVI
LILTKYYHADSTKVLESSLWRSADYGTTYTKLNLMPGTTIVVTSFYICPTNKKKVVLVGS
SINERDQMLFISTDEGSSFQRQSISFTPDTLIFHPKEEDKLLAYCKEGRLFASTDLGRKW
TLLQERVTKDRVFWSVSGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKMVTAQFLGKI
DHNSLLVQDDYIFVKVTTGNRTKHYVSYRRNEFVQMRFPKYALPKDVQIVSTDENQVFLA
LQEWYQSDTYNLYQSDPQGVYYSIVLENVRSTKQPEENVLIDILEVRGIKGVFLANQKIN
GKVTTLITYNKGRDWEPLAPPTTDMNGKPISCKAPDCHLHLHLRWADNPYVSGTVHTKDS
TPGLIMGAGNLGSKLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIP
LKILKFSIDEGWTWTVHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFR
QSFPRQCTESDYDSWQLTDLQGEKCIMGQERSFRKRKDTAFCIKGKSYTSALTTKPCHCT
EKDFNCDYGFERSHMEGNRCFADFWHDPDSPPEDCHLGQTYESSTGYRKVISNMCEGGPN
KQQSGKQHNCPLLPPKGLQVGIKGQMLAVAPGDDITFIVHQEQGDTSNTKYQVDLGDGVR
AIYQNLTVTDEPIQHRYENSGVYKVTVKAENMAGHDEATMYIQVTAPLQEVHLEVVPIAG
RNHEVNLTAVVLPTEANLTVFYWWIGDNLQPTLTLQNSLLTRFPETGEVSVTVQASNGRS
MVQDTRTVRVYDNFQVIPLSFSTDLDRFNPNIPEWREDIGQVVNKILTKITGVPQESLVT
VVKSGLPTTADLYVLPLDSKPAKKSVFVDKRIPAIMQAFNDNNVSFVVRGGLQVLVMLAD
PNAGQGLISNDSTAAAAETGYHGAAGSPGVWALAVIFLISIIATGSFILYKFKSPWLRTE
DAYPPLFFRKLPGSRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGN
AGGNHSGVVLSINSRELHSYLTS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctgcgccccgaagaacctatctccgcctttactaatctctgcctctttctg
ttgaccgcctcggcctggatggcattgccgggacccgtgcgctgtgacagcggggcttta
aaccagcgcggcggggaggaccgtacgtttggcataggcggcggagacggaggctccccg
ccgggtttaccgacggtcggtgacgaggaagccgtcggcgcgaagagctcaccccgcttc
aggagagcgctgtcccgggaaaaacaaatgtccctgctcagcagctcgttcgtgctcaaa
ggggatgcgacccacaaccaggcgatggtccactggacaggagagaacagcagcgtcatc
ttgatcctgaccaagtactaccacgctgactccaccaaggtgctggagagctcactgtgg
aggtctgctgactatggcacgacctacaccaaactcaacctgatgccaggaactaccatc
gtggtgaccagcttctacatctgcccgaccaacaagaaaaaggtagtgctggtaggttca
tccataaatgaaagggatcagatgctgtttatcagcaccgacgaaggttcctccttccag
cgacagtccatctccttcaccccagacacgctcatcttccaccccaaggaagaagacaag
ctcctggcctactgcaaggagggcaggctctttgcttccacagacctgggccgcaagtgg
actttgcttcaggagcgggtgaccaaggacagagtcttctggtcagtttctggtgtggat
gtggaccctgatctggtgcacatggaaatgcaagatacgagtggaggttacctgtatgtt
acctgtctcatccagaactgttcggacaaaatggtgacggctcagttcctcggcaaaatc
gaccacaactcgctgctggtgcaggacgactacatatttgtcaaggtcaccacagggaat
cgcaccaagcactacgtgtcctatcggcgcaatgagttcgtgcagatgaggtttcccaag
tacgccttgccaaaggatgttcagatagtgagtacggacgagaaccaggtcttcctcgcc
ctccaggagtggtaccagtcagacacatataacctgtaccagtcggacccccagggcgtc
tactactccatcgtcctggaaaatgttcgcagtaccaagcagccagaggagaatgtcctc
atcgacatacttgaggtacgtggaatcaaaggagtcttcctggccaatcagaagatcaat
ggcaaagtgacaactctcatcacctataacaaaggacgagactgggaacctttggcccca
cctactactgacatgaatggcaagccaatcagctgcaaagcgccggactgtcacctccac
ctccacctgcgctgggcggacaacccctacgtctctgggactgtccacaccaaagactct
actccaggtctcatcatgggtgctggtaaccttggctccaagctagtagagtataaggaa
gagatgtacatcacttcagactgcgggaagacgtggagacaggttttcgaggaggagcat
cacatcctgtacctggaccacggtggggtcattgttgccatcaaggacacctctattccc
ctcaagatactcaagtttagtatcgatgaaggatggacgtggactgttcacaacttcacc
agcacctctgtgtttgtcgatggactcctgagtgagccaggagacgagaccctggttatg
actgtgttcggccacatcagctacaggtcagactgggagctggtcaaagtagacttcagg
cagtcttttccccgtcagtgtactgagtctgactacgactcctggcagctcacagacctg
cagggagagaagtgcattatgggccaggagcggagtttcaggaaaaggaaggacaccgcg
ttctgtatcaaagggaaaagctacacctcagctctcaccaccaaaccctgtcactgcacc
gagaaagacttcaactgtgactatggttttgaacggtcccacatggagggcaatcgctgc
ttcgctgacttctggcacgatccagattcaccacctgaagactgccatctaggacaaacc
tacgagtccagcactggctacaggaaggtgatatctaacatgtgtgaaggagggccaaac
aagcagcagagtggcaaacagcacaactgccctctgctgccccctaaaggactacaggtc
ggcatcaaagggcagatgttggccgtggcgcctggtgatgacatcacattcattgtccac
caggaacagggcgacaccagcaacaccaagtaccaggtggacctcggtgacggggttcga
gccatctaccagaacctgacagtgacggatgagcccatccagcatcgctacgaaaattca
ggcgtttacaaggtcacggtgaaggctgagaacatggcggggcacgacgaggccaccatg
tacatccaggtcacagcccccctacaggaagtgcacctggaagtggttcccatcgctggg
agaaaccatgaggtcaatctgacagccgtagttcttcccactgaggccaacctgaccgtc
ttctactggtggataggagacaacctgcaacctacactgactctgcagaacagccttctg
actcgtttcccagagacaggagaggtttcagtcaccgtgcaggcttccaacggccggtcc
atggtgcaggataccaggacagtccgcgtctacgataacttccaggttatccctctgagc
ttcagcacggacctggaccgcttcaacccaaacatcccagagtggagagaggacattggc
caggtggtcaacaaaatactcactaagatcacaggtgtccctcaggagtccttggttaca
gtggtgaagtcgggcctccccaccactgctgacctgtacgtcctcccactggacagcaaa
ccagccaagaagagcgtatttgttgataagcgtattccagccatcatgcaggccttcaac
gacaataatgtcagcttcgtggtgcgaggaggtctacaagtgctggtgatgctagctgac
ccaaacgcagggcaaggtctaatttctaatgactcaacagctgcagcagcagagactggc
taccatggagctgccggcagtccaggggtttgggctctagcggtcattttcctaatcagc
atcatcgccaccggctccttcatcctctacaagttcaaaagtccttggcttaggactgag
gatgcctatcccccgctgtttttcaggaagcttccgggcagtcgcaacgtctacgcccag
atgcacaacgagaaggagcaggagatgaccagccctgtcaatcacagcgaggacacccag
cacatcatccagggcgaggagttcatcgacgacgacctggactcgcagactctaggtaac
gctggaggcaaccattcaggtgtggtcctgagcatcaactccagagaactacacagttac
ctgaccagctga
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