Siniperca chuatsi (mandarin fish): 122870762
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Entry
122870762 CDS
T08948
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122870762 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122870762 (taf6l)
03036 Chromosome and associated proteins [BR:
schu03036
]
122870762 (taf6l)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122870762 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
122870762 (taf6l)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122870762 (taf6l)
STAGA complex
122870762 (taf6l)
TFTC complex
122870762 (taf6l)
SAGA complex
122870762 (taf6l)
SLIK complex
122870762 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
122870762
NCBI-ProteinID:
XP_044041127
LinkDB
All DBs
Position
LG22:complement(2046434..2057115)
Genome browser
AA seq
639 aa
AA seq
DB search
MADREERRFAEVSRESVKLMAESSGVELGDDLAALLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALRWSNVEAICGCGAQDALPFRSVKEGELFFIEDRDINLVELALATNIPK
GCAETMVRVNVSYLDGKGNLEPQGTVPTAVQSLSDDLLKYYQQITRAILGEDPQLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLSQPPEGGSSGQPGSVAGAMGYMVSSPGLSPPPEPLSEAALGIA
SHLQAGGAGCPWEEWTPVPLPAMYCELYSFFGDSLAVRFSTGPGYGSYPPCTPSQLGDAR
KEPPGPASNPDTTRKMPQLTANLNISPRQDGSPRTDPPPPSLAATGSGRSLARSSSVQRS
RSSASRSGQRSAGLSRDVFPKARFTSPQTGPPAFSFLIGGRQMGRRCQGRRPFQTTFAPT
PPLSAIPPRAYAHKLPVIGRVGKPVRRWSCSHYSLHLPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggaggagcgccgcttcgccgaggtttctcgggagtctgtcaaactcatg
gccgagagttcaggcgtggagctcggcgacgatttggccgctctgctggctgaggacgtg
tgttaccggctcagggaggccacgcagagcagctctcagtttatgagacatgccaagagg
aggaagctgacagtggaggacttcaacagagctttacgctggagcaacgtggaggctata
tgtggctgcggggcccaggatgctcttcctttccgttcagtaaaagaaggagagcttttc
ttcattgaggatcgggatataaacctggtcgagttggctttggccaccaacattcccaag
ggctgtgctgagaccatggtgcgagtgaatgtgtcttacctggacgggaaaggcaacctg
gagcctcaggggacagttcccacagcagtgcagtctctgtcagacgacctgttgaagtac
taccagcagatcacacgggccatcctgggagaggacccccaactcatgaaggtggctctg
ctggaccttcagtccaactccaagatcgctgccctcctgccatactttgtttatgtcatc
agtggggtgaagtcagtaagccatgatctggagcagctcaacaggcttctccacatggtg
aagagcctggtccagaacccctacctgtacctgggctcatacgtgcgcagcctggtctcc
agcgtcatgtactgcatcctggagccgctggccgcctccatcaacccactcaatgaccac
tggaccctcagggactatgcagccctgctcctcagccacatcttctggactcatggcgat
ctggtgagtggtctctaccatcagatcctgctgtcgctccaaaaggttctgtctgaccca
gtgagaccactctgctcccactatggcgccgtggtggggcttcatgctttgggatggaag
gctgttgagagagtgctctttccacaccttcctgcctactgggccaacctccaggctgtg
ttagatgactactctgtttccaatgcccaggtcaaagcagatggacataaagtctacgga
gccatcctggtggcagtggagcgcctgctgaagatgaaggctctatctctgtctcagccg
cctgaggggggctccagcggtcagccaggctccgtggcgggtgctatgggttacatggtg
agctcccctggcctcagcccccctccagagcctctgtcagaggctgccctgggaatcgcc
agccaccttcaggcaggtggggccggctgtccctgggaagagtggaccccggtccctctc
cctgccatgtactgtgagctctactccttctttggagacagcctggctgtcaggtttagt
acagggcctggttatggcagctaccctccttgtaccccgtcccagctcggtgatgccagg
aaggaacctcctggccctgcctccaaccctgacaccacccgaaagatgccacagttgact
gccaacctcaatatcagccccaggcaggatgggagtcctcgcacagatccgcccccaccc
agcctggcagctaccggatcaggaaggtccctggctcgctcctcctctgtgcagcgctcc
agatcctccgcgtcacgttcaggccagcgctcagcaggtctgtctcgtgacgttttcccc
aaagctcgcttcacctctcctcagacaggacctccggcgttctccttcctcatcggcggg
cggcaaatgggtcgccgttgccaaggccgccgtccctttcagaccacttttgccccgact
cctcctctttctgccatcccaccgcgtgcctacgcccacaaactgcctgtcatcggcagg
gtgggtaaacctgtacgccgctggtcgtgttcccattactcccttcatctgcctctctag
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