Siniperca chuatsi (mandarin fish): 122870773
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Entry
122870773 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1-like
KO
K13095
splicing factor 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122870773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122870773
Spliceosome [BR:
schu03041
]
Complex A
Other components
Complex A specific factors
122870773
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Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
SLU7_N
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
122870773
NCBI-ProteinID:
XP_044041157
LinkDB
All DBs
Position
LG22:2372526..2385952
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AA seq
678 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGNGLMPTPGPPASFPSLQVFQPSMPNPSFPQ
SHQFNPGTSFSTQAQQQPAAGVGMAKPDFGQKKQRKKSRWSSETPDQKTVIPGMPTVIPP
GLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTR
KKIEEERHSLITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGN
TLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQI
RNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKC
GGAGHISSDCKYTSSFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSVGGHS
STHGGAPRASGPNNNQPPPQNRPPWMSSGPTENRNFHGMHGGPGGHGGPHNFPPPMPNMG
GPPMPPNPNGLPPPWMQPPPPPMGQGPGPHGHPMGLLPPPMGMMPPPPPPPSNQPPPXPS
GPLPPWQQQAPPPPPTSSMATSTPLPWQQNTTTTSSPGTGTLPPWQQPQQPAASGAQPPP
PMGTPSMVPPPPGVQPPLPPGAPPPXPPPPPGSTGMMYAPPPPPPIDPSNFVTMMGMAVP
GMPPXGMPPAPPPPPPQN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcaaacgcaactcctttagggaagttgcaccccagtattggcgctaaa
cgaggatttgacgcagggcctggtgcggggaacgggctgatgccaacaccggggccgccc
gcatcgtttccttcgctacaagttttccagccctcgatgccaaacccatcttttccgcag
tcacatcagttcaatccggggacaagtttttcgacccaggctcaacaacaaccagctgca
ggggtcggaatggccaaaccagatttcggtcagaagaaacagaggaagaagagtcgctgg
agcagcgagactcctgatcagaagacagtcataccgggcatgcccactgtcattccccct
ggactgacccgggatcaagagagagcctatatagtccaactgcagattgaagacctgact
cgtaaactgcgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctct
ccagagcccatctacaacagcgagggcaagaggttaaacacccgcgagtatcgcacacga
aagaagattgaggaggagcgccactccctcatcactgagatggttggacttaaccctgac
ttcaagcctcctgcagactataagcctccagccaccagagtcaacgacaaagttatgatc
ccccaagatgaataccctgaaatcaactttgtcggtctgctgatcgggccacgtggtaat
acactgaagaacattgagaaggagtgctgcgccaagatcatgatccggggtaaaggttct
gtgaaggaggggaaggtaggccgaaaggatggacagatgctgccaggggaagatgagcct
ctgcatgccctggtcaccgccaacacaatggagaatgtcaaaaaagctgtggagcagatt
cgcaacattctgaagcaaggcattgagacacctgaggatcagaatgacctacgaaagatg
cagctaagggagctggccagactcaatggcacattgagagaagatgacaacaggatcctt
cgtccttggcagaactctgagccacgcagcatcaccaacaccaccctctgtaccaagtgt
ggtggagcaggccacatctcctctgactgcaagtacaccagctcattcgctgcccacaga
gcgacaggtggcgagcctcctcagtcggcccaggacaaggctcgtatggacaaggagtat
ctgtccctcatggctgagttgggggaggctccagtccccacatctgttggaggacactcc
agcacccatggaggagctcctcgggcctcgggacccaacaataaccagccaccaccgcag
aacaggccaccttggatgagctctggtccgactgagaacaggaacttccatggcatgcat
ggagggcccggtggccatggagggccccacaacttccctccccccatgcccaacatggga
ggccccccgatgccccccaaccccaatggcctgcctcccccctggatgcagccccctcct
cctcccatgggccagggtccaggccctcacggacaccccatgggtctgctgccacctcca
atgggcatgatgccgcctccacctcctccccccagcaaccagccgcctcctnccccttct
gggcccctgccaccatggcaacaacaggctccacctccccctccaaccagcagcatggca
accagtacaccgctgccctggcaacagaataccaccaccacgtccagccctggcaccggc
accctgcctccatggcagcagccccagcagcccgcagcctccggagcccagcccccacca
cccatgggtaccccatccatggtgccgcctcctccgggtgtccagcccccattaccccca
ggcgcccctcctcctncccctccaccacctccaggctcaaccggcatgatgtatgccccg
ccgcccccgccacccattgacccttccaactttgtcaccatgatggggatggcagtaccg
ggcatgccccctntcggcatgcctcctgcccccccacctcctccaccccagaattaa
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