Siniperca chuatsi (mandarin fish): 122870934
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Entry
122870934 CDS
T08948
Symbol
ppfia2
Name
(RefSeq) liprin-alpha-2 isoform X1
KO
K26226
liprin-alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122870934 (ppfia2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122870934 (ppfia2)
Membrane trafficking [BR:
schu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122870934 (ppfia2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Rod_CreS
QueG_DUF1730
Motif
Other DBs
NCBI-GeneID:
122870934
NCBI-ProteinID:
XP_044041293
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All DBs
Position
LG23:complement(6286933..6447002)
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AA seq
1286 aa
AA seq
DB search
MMCEVMPTISEDTALSQRGSQSSTSDPDSHFEQLMVNMLDERDRLLDTLRETQESLGLAQ
QHLQDVIYDRDSLQRQLSSALPQEFAALTKELNACREQLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVS
LERVSALEEELTAANQEIVALREQNAHIQRKVASGEGGEDILEGSETQQKIHSKRLSNGS
LESAHEASQVVELQDLLEKQNYELAQMKERMSSLSSRVSEVEQELETARKDLIKSEEMNN
KYQRDIKEAMCQKEDMEERIVTLEKRYLSAQRESTSVHDINDKLENELANKEAFLRQMEE
KNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKSDSSSSSSPDDYHFVMEA
KLQDMNSILRKAEERHGSIEERMRHLECQLEEKNQELLRARQREKMNEEHNKRLSDTVDR
LLTESNERLQLHLKERMAALEEKNLLIQDSEGYRKQYEESIQEKTQLAEEIEKLRSELDQ
FRLRAGSLTEPTLSRSHLDTSAELRFSLGSLAETQSDHYRSAKVIRRPRRGRVGLRETKA
KSLGEHEWRSQQLGVLGGHHFESDTEMSDIDDDDRETLFSSMDLLSPSGHSDAQTLAMML
QEQLDAINKEIRLIQEEKESTELRAEEIENRVASVSLEGLNLARMHHHGASITASATASS
LASSSPPSGHSTPKLDPRSPARDMERMGVMTLPSDLRKHRRKIAAVDEDGREDKATIKCE
TSPPPTPRTVRMTHTLPASSHNDARGIVASLEAEASALSSVASSQDSLHKQPKKKGIKSS
IGRLFGKKEKGRLAHLAHRHVMVDPQATMMDPDMAGQDMGMGKLGTQAEKDRRLKKNGHE
LLEEARRKGLPFAQWDGPTVVAWLELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREI
GISNPLHRLKLRLAIQEMVSLTSPSAPPTSRTPSGNVWVTHEEMETLAAPSKTKSQSEEG
SWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDS
FHRTSLQYGIMGLKKLNYDRKELERRREHSQHEMRDVLVWSNERVIRWVQSIGLRDYANI
LLESGVHGALVALDDNFDYSSLALLLQIPNQNTQARQILEREYNNLLALGTDRRLDECDD
KDFRGPSWRRQFPPRDVHGISMMPGSAETLPAGFRLTTSGHSRRLPPEVLYEALDDSPDD
LYLDWFQVGPSAVQRLDSSTVRTYSC
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggacacagcgctgagccagcgcggctct
cagagcagcacctcagacccggactcccactttgagcagctgatggtcaacatgctggac
gagagagaccggctgctggacacgctgagggagacccaggagagcctcggcctggcccag
cagcatcttcaggacgtcatctatgaccgtgactctctgcagcgccagctcagctctgcc
ctgccacaggagtttgctgcgctgaccaaggagctgaacgcctgcagggagcagctgctg
gagaaggaggaggagatctctgagctcaaagcagagaggaacaacaccaggctactgctg
gagcatctggagtgcctggtgtccagacatgagcggtcacttcgtatgacagtggtcaag
cggcaggctcagtctccctcgggagtctccagtgaagttgaggtcctcaaagcgctcaag
tccttgtttgaacaccataaagccctagatgagaaggtacgagagagactacgggtgtca
ctggagagggtgtctgccttggaggaggagctcacagcagccaatcaggagattgtggcc
ttacgggaacaaaatgctcacattcagagaaaagtggcttccggggagggaggagaggac
atattggagggcagtgaaactcaacagaagatccatagcaagcgtctgtccaacggctct
ctggagtcggcccatgaagcgagccaggtggtggagctgcaggacctgctggagaagcag
aactacgagctggcccagatgaaggagcgcatgtcctccctctcctctcgggtctccgag
gtggagcaggagctggagactgcccgcaaagacctcatcaagtcagaggagatgaacaac
aagtaccagagggacatcaaagaggccatgtgtcagaaggaagacatggaggaacggatt
gtaactttggaaaaacgctacctaagcgcccaacgagagtccacctcggtgcacgacatc
aatgacaaactggagaatgagttggccaacaaggaggcgttcctcagacagatggaggag
aagaacaggcagctacaggagaggctggagcttgcagagcagaagctccagcagaccatg
aggaaggctgagacgctgccggaggtagaggctgaactggcccagaggatagcagccctc
accaagtctgactccagctcctcttcctcccctgatgattatcactttgttatggaagct
aaactccaagacatgaactccattcttaggaaggcggaagagcgtcacgggagcattgag
gagcgaatgaggcacttggaatgccagctggaggagaagaaccaggagctgctacgggct
cgacagagagaaaagatgaatgaggagcacaacaaacgactctccgacacggtggacaga
ctcctcacagagtcaaacgagcgccttcagctccacctgaaggagagaatggcagctcta
gaagagaagaatctgttaatccaagactcggaaggttatagaaaacagtacgaggagtca
atccaagaaaaaacacagctggcagaggagattgagaaactgagatcagagctcgaccaa
ttcagattgagggcaggctccctcacagaacccaccctgtcacggtctcatctggacaca
tcagctgagctcagattctcgttgggatctctggctgaaacccagtcggaccattaccgc
tcagccaaggtcatccgccggccaaggagaggtcgagtgggtctgcgtgaaaccaaggct
aaatcgctgggggaacatgaatggcgctcgcagcagctaggggttctgggaggccaccac
tttgagagcgacacggagatgtcggacatcgatgacgacgacagggaaacattgtttagc
tccatggacctgctctcacccagcggccactctgatgcacaaactctggccatgatgctg
caggagcagctggatgcaatcaacaaggagattcggctgatccaggaggagaaggagtcg
acagagctgcgggcggaggagattgaaaaccgggtggccagtgtcagcctcgagggcctc
aacctggctcgaatgcaccaccacggagcctccatcaccgcctcagctaccgcctcctcc
ttggcctcctcctccccacccagcggacactccacccccaaacttgatcctcgaagcccc
gcccgcgacatggagcgcatgggggtcatgacactgcccagtgatctgaggaaacacaga
agaaagatagcagcggtggacgaggatggccgcgaggacaaggccaccatcaaatgtgag
acatcgccccctccaacgccgcgcactgtccgaatgacacacacactgccagcctcttcg
cacaatgacgcacgagggatcgtggcctctctggaggctgaggccagcgcgctgagtagt
gtagccagcagccaagactccctccacaagcagccgaagaagaagggcatcaaatcctcc
atcggacggctttttggcaagaaggagaaaggcagactggcacatctggcacacagacac
gtcatggtagatccacaagcgaccatgatggacccagacatggcaggccaggatatgggg
atgggcaagctgggaactcaggctgagaaggaccgcaggttgaaaaagaacggacacgag
ctattggaggaggccaggagaaagggtttacctttcgcccaatgggacggtcccaccgtt
gtagcctggctggagctgtggttgggaatgccggcctggtacgtggcggcgtgccgtgcc
aacgtgaagagtggagccattatgtcggccctatctgacacagagatccagagggagatc
ggtatcagtaaccctctgcaccggctcaaacttcgcctggccatccaggaaatggtctcc
ctcaccagcccctctgccccgcccacctccagaaccccgtcaggcaatgtatgggtgacc
catgaggagatggagaccctggcagccccttccaaaacgaagtcacagtctgaagagggg
agctgggcacagactctagcttatggcgacatgaaccatgagtggatagggaatgagtgg
ctgcccagtctaggactacctcagtaccgcagctacttcatggagtgcctggtggatgca
cgcatgctggaccacctcaccaagaaggacctgagggtgcacctcaaaatggtggacagc
ttccacagaacaagtttacagtatggaatcatgggtctgaagaagctcaactatgacagg
aaagagctggagagacgcagggagcacagccagcatgaaatgagagacgtactggtgtgg
agtaatgagcgggtcatccgctgggtgcagagcataggcctgagggactacgccaacatc
ctgctggagagcggtgttcatggagcactggtcgccttggatgacaacttcgactatagc
agtctggcactgctcctccagatccccaaccaaaacactcaggcacgtcagattctggag
cgagagtacaataatctgctggcgctgggcactgacaggagactggatgagtgtgacgat
aaagacttccgaggtccatcatggaggaggcagtttccgccccgagacgttcacggtata
agtatgatgcccggatcagcagagacgctccctgctggattccgtctcaccacgtctggt
cactctcgaagactgcctcctgaggtcctctatgaggcgctggatgacagtcctgacgac
ttgtatttggattggtttcaagtcggaccctctgcagtgcagcggctggacagctccacg
gtgagaacctactcctgctga
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