Siniperca chuatsi (mandarin fish): 122870951
Help
Entry
122870951 CDS
T08948
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5-like isoform X1
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122870951
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
schu04030
]
122870951
G protein-coupled receptors [BR:
schu04030
]
Rhodopsin family
Others
R-spondin
122870951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRR_EndoS
LRR_LRWD1
LRRNT
LRR_R13L1-DRL21
LRR_6
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
122870951
NCBI-ProteinID:
XP_044041322
LinkDB
All DBs
Position
LG23:1992556..2039828
Genome browser
AA seq
1028 aa
AA seq
DB search
MDSHTHFHTHTPPLHACSLESDQTAHFNSDNLDFLFDCFIFFVRHFQSRLGEVNLQSDST
SGGGTAEDMPGFVALLAAFAVLSAGLRSSVAAVEMQSSVAVQESSAVPAVERTAAAGVNS
SGDGDRGAGRAGCPGRCRCEVDGLLHRVDCLDLGLREIPSNLSVFTSYLDLSMNNLTVLS
SGALSNLHFLEELRLAGNDLSFIPRGAFTGLYNLKVLMLQNNQLKTVPAEAFSNLHNLQS
LRLDANHISGVPVGCFSGLRSLRHLWLDDNSLTEVPVEALGELPALQAMTLALNHISHVP
DHAFSKLGRLVVLHLNNNRIVSMGTNCFHGLHSLETLDLNYNSLVEFPTAIRSLSHLKEL
GFHSNNIQSIPEHAFTGNPSLITIFFYDNPIQSVGRSAFQNLPELRTLSLNGAADLTEFP
DLTGTKSLESLTITGARITSLPSSVCEQLPNLQLLDLSYNQIQTLPSFSGCESVQKIDLH
HNEIEELEENTFHGLMSLRSLDLSWNRLSSVKPNSFSALPALTKLDLSSNRLSSLPLIGL
QSLTHLRLAGNSQLMELIPREDLPRVRVMELPYAFQCCAFVSCERRGGGGGGGGSSWERE
EAADSTGKETSVLSSQGDTKHTPSHLKQVDQDWEDFLMEFEDEPKLLHSVHCSPAPGPFR
PCLHLLGSWLIRGGVWLIAALSLVSNSLVVLSVFFSPATSVTPPKLLIGLLALVNGLMGV
WSGWLAAVDAWTFGSFWRYGARWESSFLCRLSGFLCVFASQTGLFLLTIAALERCLAAAR
HHKPDGHNGRSLSPLSVRLAVCLCFLLGLAVTLPPLVAGHSSTSLCLSLPSSSSSSSLAF
SVSLVLLDSLCFLLMTLAYTRLYCRANKAPPAAEEEVALTRHVAWLLFSDCLLYLPVAFL
SFSSLLRLSAAGPEAAKGMLLLVAPLPACVNPLLYILFNPLARQELAALAKRTCGAVGVP
RLGRGGGGGAGGRPNVMDSTYDEDAEKQSCDSTQALVAIGGTKDEEEEERGRGRSEAQHS
VAFVVPHH
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggactcacacacacactttcacacacacactccgccgctccacgcgtgcagcctggaa
agcgaccaaactgcacacttcaactcagacaacctggactttttatttgactgtttcata
ttctttgtgcgccactttcaatccagattaggtgaagttaatctccagtccgactccacc
tccgggggaggaaccgcggaggacatgccggggtttgtggctttgttggccgcgtttgca
gtcctctcggctgggttaaggagctccgtggccgcggtggagatgcagagctccgtggcc
gtgcaggagagctccgccgtgcccgccgtggagaggacagcggcggctggggtgaacagc
tccggggacggggacagaggagcggggcgggccggctgccctggccgctgtcggtgcgag
gtggacgggctgctgcaccgggtggactgcttggacctggggctccgggagataccgagc
aacctgagcgtcttcacatcttaccttgatctcagtatgaataatctgactgtgttgtcc
agtggagctctgtccaacctgcacttcctggaggagctgcgtttagcgggaaacgatctg
tcattcatccccagaggagcgttcaccggcctgtacaacctcaaagtgctgatgcttcag
aacaaccagctgaagaccgtccctgccgaggccttcagcaacctgcacaacctgcagtca
ctccgcctggacgccaatcacatctccggtgttcccgttggctgtttctccggcctacgc
tcgctccgtcacctgtggttggatgataactctctgacggaggtgccggtggaggccctg
ggcgagctgcccgccctgcaggccatgacgctcgccctcaaccacatcagccacgtcccc
gatcacgccttcagcaagctgggccgcctggtggtgctgcatctcaacaacaataggatc
gtttccatgggaacaaactgcttccacggactccacagtttggagacgctggatttgaac
tacaacagtctggtcgagtttccgacggccatccgttcgctcagtcacctcaaggaactt
ggtttccatagtaacaacatccagtctatcccggagcacgccttcactgggaacccctca
ctgatcaccatatttttctacgacaacccgatccagtctgttgggcgatcggcctttcag
aacctgccagagctacgcacactctctctgaatggagcagcagatctcaccgagtttcca
gatctgacgggaaccaagagcctggaaagcctgactatcacaggagctcggatcacctct
ctgcccagttcagtgtgtgagcagcttccaaaccttcagctgcttgatctctcctataat
cagatccagactcttcccagcttctccggctgcgagagcgttcagaagattgatctgcac
cataacgagatagaggaactggaggagaacaccttccacggtctgatgtcactacgctcg
cttgacttatcgtggaacagactgtcgtcagtgaagccgaactctttctctgctttgccc
gctctgaccaaacttgacctgtcgtccaatcggctgtcgtctctgcctctgattggtctg
cagagtttaactcacctgcgattggctggaaactcacagctgatggagttaataccccga
gaggacctgcccagagtcagggtgatggagcttccttacgccttccagtgctgtgccttc
gtctcctgtgagaggagaggaggaggaggaggaggaggaggttcatcctgggagagagag
gaggcagcagactctactgggaaagaaacctccgtcctctccagccaaggtgacaccaaa
cacacaccatcacatctaaaacaagtagatcaggactgggaggattttctgatggagttt
gaagatgaacccaaacttctacactctgtccactgcagccctgcaccaggaccgttccga
ccctgcctccatctgctcggcagctggttgatccgtggaggggtgtggctcatcgcagcg
ctctcattggtcagcaacagcctggtcgtcctgtcagtcttcttttcccccgccacctca
gtgacaccgcccaagctgctgatcggtctactggccctggtgaacggcctgatgggagtg
tggagcggctggttggcggcggtggatgcctggacgtttggcagcttctggaggtacggg
gcgaggtgggagagcagcttcctgtgtcggctcagcggcttcctgtgcgtatttgcgtcg
cagaccggactcttcctgctcaccatcgcagctctggagcgatgcctggccgccgctcgc
caccacaaacctgacggacataacggtcgctccttgtcgccgctctctgtccgtctggcc
gtctgtctgtgcttcctgttaggcctggccgttacgctgccccccctggtggccggacac
agtagtacctccctctgtctgtcgctgccttcgtcctcctcctcatcctccctggccttc
tccgtctccctggtgctcctcgactcgttgtgtttcctcctcatgacgctcgcctacact
cgcctctactgtcgggccaacaaagctccacccgctgctgaagaggaggtggcgttgact
cgacatgtagcctggctgctcttctccgactgcctcctctacctccccgtcgccttcctc
tccttctcctccctgctgcgcctctccgccgccgggccggaggcagcgaaggggatgctg
ctgctcgtggctccgctgccggcctgcgtcaacccgctgctctacatcctcttcaacccg
ctcgcccggcaggagctggcagcgctcgccaaacgcacctgcggggctgtgggggtaccc
agactcggcaggggaggaggaggaggagctggaggaaggccgaacgtgatggattcaacg
tacgacgaggacgcagagaaacagtcgtgtgactcgacgcaggcgctggtggcaatcgga
ggcacgaaggacgaagaggaggaggagagaggaagaggaaggagtgaggcgcaacattca
gtggcgtttgttgttccacatcactag
DBGET
integrated database retrieval system
