Siniperca chuatsi (mandarin fish): 122870955
Help
Entry
122870955 CDS
T08948
Symbol
shank3b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
schu
Siniperca chuatsi (mandarin fish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SH3_2
Ank_4
SAM_2
Ank_3
Ank_5
PDZ_6
PDZ
SH3_9
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
122870955
NCBI-ProteinID:
XP_044041332
LinkDB
All DBs
Position
LG23:2138286..2189102
Genome browser
AA seq
1726 aa
AA seq
DB search
MPLSPAADTKHDRPRQQAVTNGNPTGSAVARDDDADDTHPGNSIVVRIGIPDLQQTKCLR
LDPELPVWTSKQRVLVTLTQSLSDVLNYGLFQPAFNGRAGKFLDEERLLKEYPLPPITPI
PYLEFRYKRRIYTQSYVDDKQLAKLHTKANLKRFMEHVHQKNVEKVSKWLEKGLDPNFHD
SDTGECPLTLAVQLEESCDLIKVLRSGGAHLDFRTRDGITALHRAVLCRNSASLTTLLDL
GASPDYKDSRGLTPLYHSAMVGGAPYCCELLLQDHATIGMTDENGWQEIHQACRYGNVQH
LEHLLFYGADMSSQNASGNTALHLCALYNQDSCARVLLFRGANKDVKNYNNQTAFQVAII
AGNFDLAEIIKIHKTSDVDMRICAQVVPFRETPSYTKRRRAGAAATRTAAGNGLSSPRSL
IRSASDNALESPASSPGPSLQSLETHHDTHTHSLRRHTRRLSPSGGHVETSPPSSPPPTP
QMRKRRLYSAVPGRTFIATRSHVPQGPGEIQLHRGERVKVLSIGEGGFWEGSVKGRTGWF
PADCVEEVQMRQYDPRLETREDRTKRLFRHYTVGSYDNYTSYSDYVIEEKTAVLQKRESE
GFGFVLRGAKAETPIEEFAPTPAFPALQYLESVDQGGVAWRAGLRTGDFLIEVNGADVVK
VGHRQVVSLIRQGGSRLLMKVVSVSRKSESNLVRKKAPPPPKRAPSTSLTLRSKSMTADL
EEIARRRRIEKLDEMLAVGQQEVVLRARPSDDFRAATVKQRPTSRRITQAEINSLFERQG
LVPPTPPEKSTMALPRGMSRTKSFGTPEDDRISALINESRFPRSSSLTDSFIPPPPQTAP
PPPPSPLFLLDSGPPPSFLPPPPPARGEGLTRSSFKPGAEPRLQELSDSPTRSHAHAERQ
RKARSMIILQDTPPQLQPDTHAAAATHTATHSLHTATHTSTLSLHSTSPALGHSPLSRRR
GRPIENPYANVGQQAPPSKPQRRKSPLLKQLPVEEQGLHDSSKLEPPSSPSRAELYQQQV
LSERARVQGRRSSLFLSVEGAGSENQVPPLLTQSHSMDDLGELPPPAPVLSPSPTPHTFL
HPLTGKPLDPSSPLALALAARERALTARTPSPEPRLKHASASTTPIPTPAASPEGRHKRT
PLTTPHSSPEPRSKRTTPQTSPEQRTKRTTPQTSPELRHKRITPPLFPEGQVERPETEGG
VTSPAGPSPERWRPTPAPSLASDGHSALIDRRRSLTVGSSEEEGGAYTVTLPPALLSSSD
EETREELRRIGLVAPPPAFACPPAPPPPSSLTLLPRRVGEGGGGESGPDSLGRRGDEEEG
GDERLHDSSSSPSSLPPSITLASPPAPASPSSPPAAHPSPSSPSTTSPIALKPRLRSPIG
RGRSALRDPLLKQSSDSELLPSAASSSSPSSPLCSSPTSGRQPRYLFQRRSKLWGGGDDR
GEERRGLSPEEGGGRPAALGGQGSGSAVDLTSRSASALELSGRAGSGLDLANRLQLLNKD
SHSLGEEPSPLDPGRRSPVGGARCVDSGESKSLFSSLGELHTISQRGYGASYTVRPGSRY
PVTRRSPSPSPSPSDRSIGLASSCSERPDLSSGRGLTILKSSSLSLPSEPKEVRFVMRSA
SARTRSRSPSPSPHASPCPSPVLSGPLLALRPWRQRPLSLWNKYDVGDWLESVGLAEHRQ
RFQEHEIEGSHLPALTKDDYVELGVTRLGHRINIERALRQLLDGST
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagtccggctgctgacaccaaacatgatcgcccgcggcaacaggcggttact
aacggcaacccgacaggctctgctgttgccagggacgacgacgcggatgacacacaccct
ggaaacagcattgtcgtccgcattggcatcccggacctgcagcagacgaagtgtttgcgg
ttggacccagagttaccagtttggaccagtaagcagagggttctggtgacgttgactcag
tctctgtcggatgttttgaactatggtctcttccagccggcgttcaacggccgagccgga
aagtttctggacgaagagcggctgctgaaggagtatcctctccctcccatcacgcccatc
ccatacctggagtttcgttacaagaggagaatttacacgcagagctacgtggacgataaa
cagctggccaagctgcacaccaaggccaacctgaagcgttttatggaacatgttcaccag
aagaatgtggagaaggtttccaaatggttggaaaagggcctggaccccaacttccatgac
tctgacactggggagtgtcctctgaccctggcggtccagctggaggagagctgcgacttg
attaaagtccttcgcagtggaggagctcacctggacttcaggaccagagacggcatcacc
gctctgcatcgggccgtcctctgcaggaacagcgcttctctcaccactctgctggacctc
ggagcgtctccggactacaaggacagcagaggtctgactccgctgtatcactctgccatg
gtgggcggcgccccctactgctgtgagctgctgctgcaggaccacgccaccatcgggatg
actgatgagaacgggtggcaggaaatccaccaggcatgtcgctatggtaacgtgcagcat
ttggagcacctgctgttctacggcgctgacatgagttcccagaatgcatcgggaaacacc
gcactgcacctctgcgctctctacaaccaggacagctgtgccagagtgctgctgttcaga
ggagcaaacaaagatgtcaaaaactacaacaaccagactgcctttcaggtggcgataatt
gctgggaactttgatcttgcagaaatcattaagatccacaaaacctctgatgttgatatg
cgtatatgtgcccaagtagttcccttcagagaaactccatcgtacacgaagcgccgcaga
gccggcgccgccgcgaccaggacggcggctggaaacggtctgtcttctccacgctctctg
attcgctcggctagtgacaacgccctggaaagccccgcttcctctcctggcccctccctc
caaagcctggaaacacatcatgacacgcacacacactcgctacgacgacacacacgccgg
ctcagtccgagcggcggtcatgtggagaccagccccccctcgtcccctcccccgacgccc
cagatgaggaagaggaggctgtacagcgccgtaccaggacgcaccttcatcgccacccgg
tcccatgtcccccaggggcccggagagatccagctgcaccgaggagagagggtcaaagtt
ctgtctataggtgaaggaggattctgggaaggaagcgttaaaggaagaacgggttggttt
cctgctgactgtgttgaagaagtccagatgaggcaatacgacccacgactggagacgagg
gaggaccgcaccaagagactgttcagacattatactgtaggatcctatgacaactacacc
tcctacagtgactatgtgattgaggagaagacggccgtgctgcagaagagagagagcgag
ggattcggcttcgtcctcagaggagctaaagctgagacgcccatcgaggagtttgccccc
accccggcgttccccgccctgcagtacctggagtcggtggaccaggggggcgtggcctgg
agggcggggctacggaccggagacttcctcatagaggtgaacggtgccgacgtggtgaag
gtgggtcaccggcaggtcgtctctctgatccgacaggggggaagtcgactgctgatgaag
gtcgtatctgtttccagaaaatcagaatccaacctggtcaggaagaaagctccgccccct
ccaaaacgagcccccagcacctcgctgacactccgatccaagtccatgaccgctgacctg
gaggagatagccaggaggagacgcattgagaaactggatgagatgttggccgtgggtcaa
caggaagtagttctgagggcccgcccatcagacgacttcagagcagcgacggtcaaacag
agaccgaccagccgacgcatcacacaggccgagattaattcgttgtttgagcgtcagggt
ctggtgccccccacacctccagagaagagcaccatggcgttaccccgaggaatgtccaga
accaagagctttggcacacctgaggacgacaggatctcggctctgatcaatgaaagtcgg
tttccacggagctcctcactgacagacagcttcatccctcctcctccacagacagctcca
ccccctcctccctcaccgctcttcctcctcgactctggccctcctccctccttcctccct
cctcctcccccggccagaggggaggggctaacccgctccagcttcaagccaggggcagag
ccgaggctccaggagctctccgattcgccaacgaggagccacgcccacgccgagcggcag
aggaaggcgaggtcgatgattatcctgcaggacacgccgccgcagctgcaacctgacaca
cacgccgccgccgccacgcacactgccacacattcgcttcacaccgccacacacacctcc
acgctgtctctccacagcaccagccccgccctcggtcactcaccgctgtcacgccgccgg
ggacgaccaatagaaaacccttatgctaacgtgggacagcaggctccgccctccaagccg
cagaggaggaagtcacctttgttgaaacaacttcctgtagaggagcagggactccatgat
tcgtccaaattagagccacccagcagccccagtagggcggagctgtaccagcagcaggtt
ctttcagagcgtgctcgggttcagggccgcaggtcgtctctcttcctgtctgtggaggga
gccgggtcagaaaaccaggtgccgcccctcctgactcagagccattcaatggacgacctc
ggcgagcttccacctccagccccggtcctgtcgccctcaccaacacctcacaccttcctc
cacccactgacagggaaacctctagacccgtcatctccactcgccctggctcttgctgca
cgagaacgagcgctcactgcccgcacgccgagccctgaacctcgacttaaacacgcatct
gcctccaccacacccatccccaccccagctgccagccccgagggcagacacaaacgcact
cctctcaccaccccgcacagcagccccgagccacgatccaaacgcaccacccctcagaca
agccccgagcagagaaccaagcgcaccactccccagaccagtcccgagctgaggcataaa
cgcataaccccacctttgttccctgaaggacaggtggagcgtccagaaacagagggagga
gtgacatcacctgccggcccctcccctgagcgctggagacccacccccgcgccatcactg
gccagtgacggtcactctgctttgattgacaggcgcagaagcctcacagtgggcagctca
gaggaagagggcggggcttacacagttacactcccacctgcattgttgtcatccagtgat
gaggagactagggaggagctccgtagaatcggcctggtagctccaccccctgccttcgcc
tgtcctcctgcccctcctcccccatcttccctcaccttgttgccacggcgagtaggggag
ggagggggaggagagagtggtcctgactccctgggcagacgaggagatgaggaagaagga
ggtgatgaacggctccatgacagctcctcctcccccagctcgctccctccttccatcacc
ttggcctcccctcctgctccggcctccccctcctccccacctgctgctcacccttcccca
tcctccccctccaccacctccccaattgctcttaagccacgtcttcgttcaccaatcggt
cggggccgctctgcgctccgggaccctctgctgaagcaatcatcagacagtgagctcctc
ccttctgctgcatcctcctcctccccctcctccccactctgttcctcccccactagtggc
cgacagccacgctatctgttccagaggaggtccaagctgtgggggggtggggacgaccgt
ggcgaggagcggcggggcctcagcccggaggaagggggaggccgtccagcagcactggga
ggtcaggggtcagggtcagccgtggatctgaccagccggtcggcgtcagcactggagctg
agcggcagggcggggtctggactagatcttgctaatcggctacagctgctcaacaaagac
agtcactctctgggggaggagccgagtcccctcgatccaggccggaggtcaccagtagga
ggtgccagatgtgtggacagtggagagagtaaatcgttgttctctagtcttggtgaactc
cacactatctcccagcgaggatatggtgccagctatacagtccgaccaggaagccgctac
cctgtcacccgccggagcccctccccctctccctccccatctgatcgatcaatagggctt
gcctcctcttgctctgaaaggccagatctgagctccggtcgcggtctaaccatcctgaag
tcctccagtctcagtctcccctcagaaccaaaggaggttcggtttgtgatgcgaagtgcc
agcgcacgaaccaggtcccgttcaccctcaccttcaccccatgcctctccctgcccctcc
ccggtcctcagcgggcccctgttggcccttcggccatggaggcagcggcccctcagcctg
tggaataaatatgacgtgggtgactggctggagagcgtgggccttgccgaacaccgccag
cgcttccaggagcacgagatcgaaggttcccatctccccgccctcaccaaagacgactac
gtggagctgggcgtcaccagactgggacaccgaatcaacatcgagagggcactcagacag
ctgctggatggttccacttga
DBGET
integrated database retrieval system
