Siniperca chuatsi (mandarin fish): 122870988
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Entry
122870988 CDS
T08948
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schu03009
]
122870988 (pwp1)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
90S particles
Other 90S particles
122870988 (pwp1)
Pre-60S particles
Other pre-60S particles
122870988 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_RFWD3
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
122870988
NCBI-ProteinID:
XP_044041404
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All DBs
Position
LG23:complement(11684170..11690982)
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AA seq
491 aa
AA seq
DB search
MSSQITCVGWVGRGVAKETPDKVELSQEELQRIITEAKEELGELAAEDEEEEDEGIACER
NPKTADVADVPKDENEEVKEEDDELAEYGLDKYDEEDTVTASLGDSLAGLTVFSSNEEDP
YITLKDTDQYEREDFQIKPSDNLILTGRAEKDCCNLEIHVYNSEEDSLYVHHDILLPAYP
LCVEWLNFDPSPGEGHANYAAVGNMTPQIDVWDLDVVDCLEPAFSLGSKKASKKKKKSKK
GAAAEPVEGHTDAVLDLSWNKLARNVLASGSADDTVILWDLTQGKPATTLRRHTDKVQTL
SFHPFEAQTLISGSYDKTAVLYDCRSPDNSYRTWRFSGQVERLIWNHFSPCNFLASTEDG
FVYCLDARSDKPVFTLRAHDEEVSGLDLSSQIKGCLVTSSADKHVKIWDILGNKPNLVHS
RDMKMGVLFCASCCPDMPFIYAFGGQKDGLRVWDISDVAAVAEVFGSRERLVVNTGSQAS
STAATAEMEIS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccagattacttgtgtcggatgggtgggcagaggcgttgccaaggaaaccccg
gacaaagttgagttgagccaagaggagctacagcgcatcattactgaagcaaaagaggag
ctgggggaactagcagctgaggatgaagaagaggaggatgaaggtattgcttgtgaacgt
aatcctaaaacagcagatgttgctgatgttccaaaggatgagaatgaagaagtgaaggag
gaagatgacgagctagcagagtacggcctggataaatatgatgaagaggatacagtgacc
gctagtctcggtgacagtctggctgggcttaccgtgttcagctctaatgaggaggatcct
tacatcaccctcaaagacacagaccagtatgagcgggaagacttccaaatcaagcccagt
gacaatctcatcctgacaggccgtgcagagaaggactgctgcaatctggagatccatgtt
tataactctgaggaggactccctgtatgttcatcatgatattctgctgccagcttaccca
ctgtgtgtggagtggctaaactttgaccccagccccggagaagggcacgctaattatgcc
gccgttggcaacatgactcctcagatagatgtgtgggacctggacgtggtggactgttta
gagccagccttctccctggggagcaaaaaggcctccaagaagaaaaagaagagcaagaag
ggggcagcagcagagcctgtcgaggggcacacagatgcagtgctggatttatcctggaac
aaactggccagaaatgtgttggccagtggatcagcagatgacacagttatcttgtgggat
cttactcaaggcaaaccggccacaactctgcgcaggcacactgataaggttcagacgtta
tcattccacccatttgaggcacagactctgatatcaggatcatacgacaagacagctgtt
ctgtatgactgccgcagtccagacaacagctatcgcacgtggaggtttagtggtcaagtg
gagcgtctgatctggaaccacttttcaccatgcaacttcctggccagcacagaggatgga
tttgtctactgtctggacgcacgctcagataaacctgttttcacactgagggctcatgat
gaagaagtttcaggtttggaccttagcagccagattaaaggatgcctggtcacctcatca
gctgacaaacacgttaagatttgggacattttgggcaacaaacccaacctggtgcactca
cgggatatgaaaatgggtgtgctgttctgtgcttcatgctgccctgacatgcccttcatc
tacgccttcgggggacagaaagatggcttgcgggtttgggatataagtgatgttgcagca
gtggccgaggtgtttggcagccgagagcgccttgtggtgaacacaggatcacaggcatcc
agcactgcagccacagcagagatggaaatctcctag
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