Siniperca chuatsi (mandarin fish): 122871047
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Entry
122871047 CDS
T08948
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
schu03012
]
122871047 (dhx57)
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122871047 (dhx57)
Translation factors [BR:
schu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122871047 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
RWD
zf-CCCH_4
HA2_N
zf-CCCH
AAA_22
AAA_19
zf_CCCH_4
Torus
NPHP3_N
NB-ARC
nSTAND3
AAA_14
ATPase_2
AAA_16
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-GeneID:
122871047
NCBI-ProteinID:
XP_044041527
LinkDB
All DBs
Position
LG23:complement(14108294..14119309)
Genome browser
AA seq
1473 aa
AA seq
DB search
MNARKRGGKPNRGGGRFNKPKGGGGGGGGRGGGGGGGGRKAGAHHWDDDDDFSLDFGPSR
PSRPGKVRGSGSGGGGGSGRGGGGGGRAGGRDGGRGRGGSDRDRGGRDRDRDGRGNGKSI
GQALPWSLARARTCPKSGDSIGPEVSTMPLQRIFMTNENQEQLKELLWDLQTLDFDEQYD
ESGSDYSGVGENEEDFDELDHREEGQFWATNDEPVERAESPAYEAESDDERPSPEPIISL
FAIGKLCRYGFDRERSKQALESFGGEFGATLEQLLHQVFSERYGQKAVSPDGLEGVPMDE
CLSQRQEESLALAAIYGERFSERIANAVWTVTLDLSFLSDNAARNDGRVGSRDGGGAVNI
RDVCRFYMKGQGCRFGDKCKFKHQLPTKGRSGAGSPDLNGPSQPGFSSYSPPEYELQIRF
PKGNRYPFQAPIVAFSTTDESVGAAGRLSVTERLFGEALAAAKSSEPVVYTLITICEDET
TMNELLAVSHHKYSTLPPVGVVPPPSLSIAKTKSVRSTASEESRSSSSISRSNHTNSRRT
APPNNQRPTDLKETGEAEELDERDEEDEDEAVPVESESYVNLRKKMVNKHNLKIDNLLQE
NGKLCREFQKKRSSRPFRSMLEHRRKLPAWQEKENILDLLDRCQVLVVSGMTGCGKTTQI
PQFILDASLNGRAEQVANIICTQPRRISAISVAQRVAQERAERLGNSVGYQIRLESVRTS
ATRLLYCTTGVLLRRLESEADLKGVTHVIVDEVHERTEESDFLLLVLKDLIVQRPDLKII
LMSATLNANLFSEYFYNCPAVHIPGRTFPVDQFFLEDAIAKSRYVIEDGSPYMRSGKQNS
SSTSGRGSKGEPRNVVDDLGNDMWNFMSFSKKDFVKDSIPDQQLSLQELTVRYKDTNKSV
LKTISTMDLDKINMDLVESLLEWIVDGKHNYPPGAVLVFLPGLAEIKMLYEQLKSNRMFN
NRGASRCAVYPLHSTLSNEEQQAVFSRPPEGVTKIIISTNIAETSVTIDDVVYVIDSGKM
KEKRYDASKSMESLEDSWVSRANALQRKGRAGRVASGVCFHLFTSHCFQHQLAEQQLPEI
QRVPLEQLCLRIKILDVFAERTLESVFSRLIEPPAMGSLDAAKQRLLDLGALTADEKLTP
LGYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFASPWDKREEANEKKLAF
ALANSDHLALLQAYKGWCCAAKNGNQAGFRYCRENFLSWRGLQEIASLKRQFAELLSDIG
FIKEGLRARIIERMCSKGTDGVLEATGPEANLNSENIRLMSAMLCAALYPNVVQVRAPQG
NYKMTSKGAMKMQPKANELRFMTKNDGCVHVHPSSVNYTVRHYDSPYLVYHEKVKTSRVF
IRDCSMVSVYALVLLGGGQVNMELQKEGFVISLDDGWIRFAAASHQVAELVKELRWELDQ
LLEDKIRNPSMDLCSCPRGSRIIRMIVHLISTQ
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaggaaacgaggtggaaagccgaacagaggaggggggagatttaacaagcca
aaaggagggggagggggaggaggaggcagaggtggtggtggaggaggtggaggtaggaaa
gcaggagctcatcactgggacgacgacgatgatttcagccttgattttggaccctctcgt
cccagcagacctggcaaagtacgaggcagtggcagtggaggtggtggtggcagcggccgt
ggaggtggtggcggcggccgtgcaggtggcagggatggaggtcgaggaaggggaggtagc
gatcgagacaggggaggtagagatcgagacagggacggcagaggcaatgggaaaagcatt
ggccaggctctcccatggtccctggcgagggccagaacgtgcccaaagtcaggtgacagc
atcgggccggaggtgagcaccatgcccttgcagaggatcttcatgactaatgagaaccaa
gaacaactcaaggagctgctctgggatctgcagacccttgactttgatgagcaatatgat
gaatctggttcagactattcgggggtgggggagaatgaggaggattttgatgagttggac
caccgtgaggaaggccagttttgggccactaacgatgagcctgtggagagagcagagagc
ccagcatatgaggcagagtctgatgatgaacggcccagccctgaacctatcatctcctta
tttgccataggaaaactctgcaggtatgggtttgacagggagcgcagcaagcaggcactg
gagtcttttggaggggaatttggcgccactttggagcagctcctccaccaggttttcagt
gagcgctacggccagaaagcagtttcccccgatggtcttgaaggggtgcctatggatgag
tgtttgagccagaggcaggaagaatctctggctctggctgccatttacggtgagcgcttc
agtgagcggattgccaatgcagtgtggacagtaaccctggacctctcattcctctcagac
aatgctgccaggaatgatgggagagtcgggagtcgagatggtggaggagctgttaacatc
cgtgatgtctgccgattctacatgaaagggcaaggctgccggtttggggacaaatgcaag
tttaagcaccagctccccactaaagggagatctggggctggttccccagacctaaatggc
ccaagccagcctggcttcagcagctattctcctcctgagtatgaactacagatccgtttc
cccaaaggaaaccgttacccatttcaggcaccaatagtcgccttcagcaccaccgatgag
tctgtcggggctgcagggaggctcagcgtgactgaaagattgtttggagaagcgttggct
gcagcaaagagcagcgagcctgttgtttacactctgatcaccatatgtgaggatgaaact
accatgaatgaactgctggctgtcagtcatcacaaatacagcacgctgccgcctgttggg
gtggttcctccaccctctctttccatagcaaagactaagagtgtgaggagcacagcttct
gaggaaagcaggagtagtagtagtatcagtaggagtaatcataccaacagcagaagaact
gctccacctaacaaccagagacctacagatctgaaagagacaggagaggcagaggagctg
gacgagagggatgaggaagatgaggatgaggctgtaccagtcgagagcgagagttatgtc
aatctgaggaagaagatggtgaataagcacaacctgaagatagacaacctactgcaagaa
aatggcaagctgtgccgggagtttcagaagaaacggtcatcccggcctttcaggtccatg
ttggagcacaggaggaagctgccggcttggcaagaaaaagaaaacatcctcgacctgtta
gaccggtgccaggtgctggtggtcagtgggatgactgggtgtggtaagaccactcagatc
cctcagttcattctggatgcctcattaaatggtcgagcggagcaggtggccaacatcatc
tgtactcagccacgacgcatctctgccatctcggtggcccagagggtggcacaggagcgt
gcagagcgtttgggcaactcagtgggctaccagatccgcctggagagtgttaggacatct
gccaccagactgctgtactgcaccacaggcgtgttactgaggaggctggagagcgaggca
gacctcaaaggcgtcacacacgtcattgtggatgaagtgcacgagcgaaccgaggagagt
gacttcctgctgttggtattaaaagacctgattgtgcagaggccagacctgaagatcatt
ctaatgagtgccacacttaatgccaacctcttctctgagtatttttacaactgtcccgct
gtccacataccagggcgtactttccccgtcgaccagttttttcttgaagatgccattgct
aaatcccgctatgtcatcgaggatggcagcccttacatgcgctcagggaaacagaattcg
tcttccacaagtggacgaggaagcaaaggagagccaaggaacgtggtggacgacctgggt
aatgacatgtggaacttcatgtctttctctaagaaggactttgttaaagactccattcca
gaccagcagctcagcctgcaggagctcacagtcagatacaaagatactaataagtctgtg
ctgaagaccatttctacaatggacctggacaagatcaacatggacttggtggagagcctg
ctggagtggattgtagatggaaaacacaactaccctccaggtgcagtgctcgtgtttttg
ccaggcctggctgagatcaagatgctctatgagcagctcaagtccaacagaatgttcaac
aacaggggcgcaagcaggtgtgcggtgtacccactccactcaaccttgtccaatgaggag
cagcaggcagttttcagccggcccccagagggtgtcacaaagattatcatctccaccaac
atcgcagagacctcggtaaccattgacgacgtggtatatgtcatcgactctggcaagatg
aaggagaaaaggtacgatgcatctaaaagcatggagagcctggaggactcatgggtttct
cgggccaacgcgctgcagaggaagggtcgagcaggtcgcgtggcctcgggggtctgcttc
cacctcttcaccagccactgcttccaacaccagctggctgagcaacagctgcctgagatc
cagagagtgcctctagagcagctctgcctccgaatcaagatcctggacgtgtttgccgag
cggacgctggagtcggtcttctctcggctcatcgagcccccagctatgggaagtttggat
gcagccaagcagcgcctgctggacctgggagctcttactgcagatgagaagctgaccccg
ctgggctaccacctggcctgcctgcccgtcgacgtgcgcattgggaaactcatgctgttc
ggtgccatctttcgctgcctcgacccagcactcaccatcgccgccagtctggccttcaaa
tcaccatttgcgtctccatgggataagcgggaagaagccaatgagaagaaactggccttt
gctttggccaatagtgaccatctagctttattacaggcatacaagggatggtgctgtgct
gcaaagaatggcaaccaggccggcttccgttactgcagggagaactttctgtcttggcga
ggcttacaggagatcgccagtctgaagaggcagtttgctgagctgctgtctgacattggc
ttcatcaaggagggactgagggccaggattatagagcgcatgtgctctaaaggcaccgat
ggtgttctggaggctactggccccgaggctaacttgaactcagaaaacatccggctgatg
tctgccatgctttgcgctgccctctatcccaatgtagtccaggtgcgagctcctcagggg
aattacaagatgaccagcaaaggagcgatgaagatgcagcccaaagccaacgagctccgc
ttcatgaccaagaacgacggctgcgtccacgtgcacccctcgtctgtcaactacacagtt
cgccactatgacagcccctacctggtttaccacgagaaggtcaaaacaagccgcgtcttc
attagggactgtagcatggtgtctgtctacgcgctggtgctgctcggaggcgggcaggtc
aacatggagctgcagaaggaagggtttgtcatctccctcgatgatggatggatccgattt
gctgccgcttctcaccaggtggctgagcttgtgaaggagctgcgctgggagctggaccag
ctgctggaagacaaaatcaggaacccgagcatggacctgtgcagctgcccccgcggctcc
cgcatcatccgcatgatagtccacctcatctctacacagtag
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integrated database retrieval system
