Siniperca chuatsi (mandarin fish): 122871050
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Entry
122871050 CDS
T08948
Name
(RefSeq) leucine-rich repeat neuronal protein 3
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122871050
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122871050
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
LRR_1
fn3
Ig_2
LRR_EndoS
LRRNT
LRRCT
Pur_ac_phosph_N
Fn3_ELFN
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
122871050
NCBI-ProteinID:
XP_044041539
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All DBs
Position
LG23:complement(13889247..13906620)
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AA seq
708 aa
AA seq
DB search
MKDVSFVDLFVGLAMASFVVATEERRDCPKLCVCEIRPWFSPSSVYMEAQTVDCNDLGLF
SLPEKLPVGTQVLLLQTNNVAKVDQPLDYLANITEIDLSQNNISSISDVHLGNLPQLLSF
HMEENWIRELPERCLAEVANLQELYMNHNLISSISPTAFQGLSNLVRLHLNSNKLRLIKR
EWFEPMPNLEILMIGENPILSVDDMNFKPLSNLRSLVLTRMNLSQLPDDALAGLDNLESI
SFYDNIFPEVPHSALRNAKNLKFLDLNKNPIARIQRGDFVDMLHLKELGINSMPELVSID
SFALNNLPELTKIEATNNPKLSYIHPNAFYKLPRLETLMLNGNALSALHRITVESLPNLR
EVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLYCVEPPEYEGQHVRQVHFREMMEICLP
LISPESMPGHIKAQNGSSVSLHCRAFAEPEPDIYWITPSGTRVLPNTVSDKFYMHPEGTF
DIYDVTENEAGLYTCVAHNLVGADLKSVSVEVNGYFPQPANGSLNVTIKSVETNSILVSW
KAGSGTLAPNIKWYTVSDANHPTTAFTTRVPSDVQVYNLTHLSPATHYKVCVDVRSIHYN
HDNKCVNVTTKGLELAAKDTEKWDAAEITIFGVLLAVISVACLFIYVSLRNHHLYGDIRK
CDSKASLTPAEATGTHFPFFTKLWVSGKGLPSGVEVKATVINVSDNAF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtgtcattcgtggatctctttgttggcttggccatggcctcttttgttgta
gccacagaggagaggcgtgattgcccgaagctctgtgtatgtgagattagaccctggttt
tctcccagttcggtgtacatggaggcacagacagttgactgtaatgacttgggactcttt
agcctgccagaaaaattaccagtgggcacacaagtactattactgcaaacaaacaatgtt
gccaaggttgaccaacccttggattacctggccaacatcacagagattgatttatcgcaa
aacaacatatcctctatcagtgacgtccatctggggaatcttcctcagttgctgtccttt
cacatggaggaaaattggatacgagagttgcctgaacgatgtcttgctgaggtggctaac
cttcaggagctctacatgaatcacaacctcatctcctccatttccccaacggctttccag
ggtctcagcaaccttgtgcggctccacctcaattctaacaagctgaggctcattaaaaga
gagtggttcgaacccatgccaaatctggagatcctgatgattggtgagaatcctattctt
tctgttgatgatatgaacttcaaacctctcagtaacctccgcagtcttgttctcaccaga
atgaacctgtctcagcttcctgatgatgcactggctggtcttgataacttagagagcatc
tctttctatgataatattttccctgaggtgcctcattctgccctgagaaatgcaaaaaat
cttaagtttttggatctaaataagaacccaattgcgaggatacagagaggggactttgtg
gatatgctccatctgaaagaactggggattaatagcatgccagagctagtttccatcgac
agctttgccctcaataacctccctgagctgaccaaaatagaagccaccaacaaccctaaa
ctctcctatatccaccctaatgctttctacaaactaccacggctggaaaccctaatgcta
aatggcaatgcgctcagtgccctccacaggattactgtcgagtccctgccaaatctcaga
gaggttagcatgcacagcaaccccatccgctgtgactgcgtagtccgctggatgaacatg
aacaagaccaacatccgctttatggagcctgattcgctgtactgtgtggagcctccggag
tatgagggccagcatgtccgacaggtgcacttcagggagatgatggagatttgtctgcca
ctcatctctcccgaaagcatgcctgggcatattaaagcacagaatgggagctcagtgtca
ctccattgtcgggcctttgctgaaccagagccggacatctactggataaccccgtcgggt
accagggtcctgcctaacactgtgtctgacaagttctacatgcacccagagggaactttt
gacatctatgatgtaacagaaaatgaagctggtctttacacttgtgttgcccataatctg
gttggagctgatcttaagtctgtttcagtagaggtgaatggatattttccccaacctgca
aatgggtctctcaatgtcactatcaaatcagtggagacaaactccatcctggtttcgtgg
aaggccggctctggcaccctggcgcccaacattaaatggtacacagtgtcagatgctaac
catcccaccacggcgtttaccaccagggttccctctgacgtccaggtctacaacctcacc
catctcagccccgctactcactacaaagtatgtgtggatgtccgtagcatccactacaac
catgacaacaaatgtgtcaatgtcaccactaagggattagagctggcagccaaggacaca
gaaaaatgggacgcagcagaaatcaccatctttggtgtgctcttggctgtgatttcagtg
gcatgcctgtttatttatgtgtctctgaggaaccaccacctttatggggatataaggaaa
tgcgactccaaagcttcattgacaccagcggaagctactggtacgcactttcctttcttt
acaaagctgtgggtttcgggtaagggactgccaagtggagtagaagtgaaagccacagtc
ataaatgtatctgacaatgccttttaa
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