Siniperca chuatsi (mandarin fish): 122871051
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Entry
122871051 CDS
T08948
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
122871051 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122871051 (cald1a)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
122871051 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
122871051
NCBI-ProteinID:
XP_044041540
LinkDB
All DBs
Position
LG23:13734893..14076725
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AA seq
657 aa
AA seq
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MGNQSHHLPLRISRGRPTVGSNLKIKKQHDWSAGSPNPITRRPLQLPFQPFQWNTHRCQG
TIMEEIDFEQRRELRRQKREEMRLEAERLARNDDDEEEAARERRRRARQERLMSRESEEP
SGQPDSLVMTNSHSVTETVSSSYGGGGGDDEEQALQERMSKREERRQRRMKEALERQRQL
DPTVSEDNDHVATEKNNAEEERPSSWRRGRYRDNEDEEEKTEMYSSRREEKEREEPREEE
EAAPEGGEEAEEGVDEEEEQKVEVVEDKPRRSYLREQESTEEPKIQNKELAEEETHSVVS
ESSNQAKATNSEAEEDAVASEEAEEVNERGGAREEREEQGKQNGGLYEEAAPKQHRKPER
TLSRGSVRSPEASAGDDQDDAARLEAERKLEELKRRRDDAESEEFERMRQKQQEAEAELE
ELKRKREERRKVLEEEERQKKQEEAEKKAREEEEKRKMKEEIERRRAEAAEKRQKVEDTM
DGEDRPFKCVSPRGSSLKIGERAEFLNKSAQKSTVKMSHSPAVSKIDNRLEQYTSAAQQR
ENKESRSPRSGAVDLPMVTDGIRNIKSMWEKGNVFTSPGGGGSTFKEAAVMKTGVAGRIN
DWLNKTPERAKTSGERPADLKPVDVTNKRSLWENKGASPTKVAGRGETKSVANGMGH
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccaaagccatcatcttccactcagaattagcagaggcagaccaactgtgggg
tcaaacctgaaaatcaagaagcagcatgactggtccgcagggagccctaatccaataact
cgcaggccattgcagctgccatttcagccatttcagtggaatacacacagatgccagggc
acaatcatggaggaaattgactttgaacagcgccgggaactgaggaggcagaagcgggag
gagatgcgtctggaggccgaacggttggcaagaaatgatgatgatgaggaggaggcggcc
cgcgagaggaggcgcagggcacgccaggagaggctgatgagcagggagagtgaggagccc
agtggacagccagacagtctggtcatgaccaacagtcacagtgtgacagagactgtgagc
agctcttatggaggaggcggcggagacgacgaggaacaagccctgcaggagcgcatgtcc
aaacgcgaggagagacggcagagacgcatgaaggaggcactggagagacagaggcagctg
gaccccaccgtgagtgaggacaacgaccacgtcgccacggagaaaaacaacgcagaagag
gagaggccatcctcctggcgtaggggtcgttaccgtgacaatgaggatgaagaggagaag
acagagatgtacagctctaggagagaggagaaggagcgagaggagccgagggaggaagaa
gaggctgctcctgagggtggagaggaagcagaggagggtgtagatgaagaggaggagcag
aaagtggaagtggtggaggacaaaccgagaaggtcttacttgagagaacaggaatcaact
gaagaacctaaaattcaaaacaaggaactcgctgaagaagaaacacattcagtagtcagt
gagagttcaaaccaggccaaggcaacaaattcagaggctgaggaggatgcagttgcatca
gaggaggctgaagaggtgaatgagcgaggcggggccagggaggagagggaggagcaggga
aagcagaacggagggctgtatgaggaggcggctcccaaacagcacaggaaacctgagagg
accctcagtcgcggcagtgtacgttcccccgaggcgtccgcaggtgacgaccaagacgac
gctgcccgcctggaggcagagcgcaagctggaagagctgaagcggcgccgcgacgacgca
gagagcgaggagtttgagagaatgaggcagaagcagcaggaggccgaagccgagctagag
gagctgaagaggaagagggaagagaggaggaaggtgctggaggaggaggagaggcagaag
aagcaggaggaggcggagaaaaaagccagagaggaggaggagaagaggaagatgaaggag
gagattgaaaggaggagagcagaggcagctgagaagagacagaaggtggaagacactatg
gacggggaggacagacccttcaagtgtgtcagccctcgaggctcctctctgaagattgga
gagagggcagagttcctgaacaagtcggcacagaaaagcacggtgaagatgtctcattct
cccgcagtgtccaagatagacaacaggctggagcagtacacctcagctgctcagcagaga
gagaacaaggagtctcgatcccctcgctctggagcggtggatctgcccatggtcaccgac
ggcatacgaaacatcaagagcatgtgggagaaaggcaacgtgttcacctcacctggaggt
ggcgggagcacgttcaaggaagcagctgtgatgaagacaggcgtggcaggccgcatcaac
gactggctgaataaaaccccggagagggccaaaacatcaggagaaaggccagcggacctg
aagcctgttgacgtcaccaacaagaggagtctatgggaaaacaaaggtgcctctccaacc
aaggtggcaggcagaggggagaccaaatcagtcgccaacggtatgggacactaa
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