Siniperca chuatsi (mandarin fish): 122871094
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Entry
122871094 CDS
T08948
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122871094 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122871094 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
122871094 (cntn1b)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
Contactins
122871094 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
Others
122871094 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
122871094
NCBI-ProteinID:
XP_044041655
LinkDB
All DBs
Position
LG23:complement(12957981..12972539)
Genome browser
AA seq
1042 aa
AA seq
DB search
MASTALLFLALSSSVSLTVAVLFGEPRIYGEDATGYGPIFEEEPVDVVYTEDSPDGRISM
NCRARANPPASYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPKQKKHAGTYVCVAKNIY
GTVISKEARVKFGFVEEFPQEDRDPVYVKEGQGAVLLCAPPKAWPQEVTYRWIYNEFPVF
LHTDQRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPIIGKSVFSKFIPLIPLPPEDGEER
KYPADIRVKFPDTTAMLASNITLECFALGNPVPHIVWRKVDSTDLPPNHEISESGAVLHL
YNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQIDIGSEHTMRCVASGK
PFPFIRWYKDGYMYGKGELKFSSLTFDDSGMYQCIAENYWGIKYANAELRVIACAPTFEF
NPVKKQLLGAKDGRVVIECKPRAAPRPRYTWTKGKELLFNNSRISILFDGSLEILNATKN
DEGVYNCFAENDRGKANSSGYLTITEATSITEAPEDTEVKVGDEVILRCAASYDPMLDIA
FIWAIDFRVIDFDSEGQHYERVMSEDGRGDLRIKNVQIWHEGRYTCTTQTVVDSDTAYAD
LKVVGVPGPPGVIRVEEIGDTWVKLLWTKGADHNSPILYYTIQTRHYWAVNEDDWRDAST
SPTLLDGNAERAEVTDLYPWMEYQFRIIATNEHGSGEASIPSLKIKTWDSSPVIAPTDVA
GYGGRNGEIVITWTPVQPWYFYGKKFGYIVAFKPYDAYDWWYETISDPETRRYVHRDSYF
IPTDEDFQVREFQVKIKSFNVKGDGPYSPTQDIYYPRDVPTESPTDVYARPVSSTEALVW
WLPVVDTGTGLQQYIEGYQVKYWRKYDDPEPGAHRIFVPATVNQTRLENMLPDAHYLIEV
RAFNGAGLGPPGEHCEMFTKRPPPPDPPRMWRYITWTGQWLYVWWDHIQYDWFGNISFPL
YYKVMFRKTGYIYGKVYITGWHFMDFPMPQVGDYELMVRGRYEGGDGPIRKIRIQGKASM
ITPTLSLVSLVLLALCIVGLEI
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactgctttactgttcctggccctctcctcctccgtctccctcacagtggcg
gtcctatttggtgagcctagaatttatggagaggatgctactggatatggccccatcttt
gaggaggagcctgtggatgtggtctatactgaggactcacctgatgggagaatctccatg
aactgcagggcacgagcgaacccaccagcttcatacaggtggcgccgtgataactgggaa
atcaagctgatggagcagccagacgaacactacagccttgtgggggggaacctggttatc
acaaaccccaaacagaagaaacacgccgggacgtacgtctgcgtggccaagaacatctat
ggcaccgtcatcagcaaggaagccagggtcaagtttggatttgtggaggagtttccccag
gaggacagagacccagtgtatgtcaaagagggacagggggctgttctgctgtgcgcccct
ccaaaagcctggccacaggaggtgacctaccgctggatctacaatgagttcccagttttc
ctgcacacggatcaacgtcggtttgtctcccagaagacggggaacctgtacatctccaaa
gtggaagctcaggatgcaggaaactactcctgcttcgtttccagtcccatcatagggaag
agtgtcttctccaagttcatccccctcatccccttaccccctgaggacggtgaggagaga
aagtacccagcagacatcagggtgaagttcccagatactactgctatgctggcctctaat
attacgttagagtgctttgcactgggaaaccccgtccctcatattgtttggaggaaagtg
gactcgacagacctcccaccaaatcatgagatcagcgaatctggagctgtgcttcatctg
tacaacgtacagtatgaagatgtgggcggatacgaatgtgaagccatcaatactaaagga
aaggactggcacaaagcctggctgtatgtggagtctgctccagagtgggcagaaaccatc
aacaacactcagattgacatcggctcagagcacaccatgcgctgtgtggcgtcagggaag
ccctttcctttcatccgctggtacaaagatggatatatgtatgggaagggggagttgaag
ttttccagtctcacttttgatgactcaggaatgtaccagtgtatcgctgagaactactgg
ggcatcaaatacgccaacgctgagctgcgagtcatcgcctgtgctcctacattcgagttt
aaccctgtgaagaagcagcttcttggagctaaagatggccgtgtggtgatcgagtgtaaa
cctcgagctgctcctagaccgcggtacacctggacaaagggcaaagagctcctcttcaac
aattcacgcatttccatcctgtttgatgggagtctggagatcctcaatgccactaaaaat
gatgagggtgtctacaactgctttgctgagaatgacagaggaaaggccaacagctctggc
tatctcaccatcacagaggctaccagcatcacagaagcgcctgaagacactgaggtaaag
gttggtgatgaggtgattctgaggtgtgctgcttcatacgaccccatgctggacatcgca
ttcatctgggccatagactttagggtcatcgactttgactctgaagggcaacactacgaa
cgcgttatgagtgaagatggcaggggtgacctgagaataaagaatgtccagatttggcac
gaaggtcgctacacctgcacgactcagacagtggtggacagcgacacagcatacgctgac
ctcaaggttgtaggtgttcccgggcctccgggtgtgatccgggtggaagagatcggggac
acgtgggtgaagctgttgtggactaaaggagcggatcataacagccccattctctactac
accattcaaaccagacactactgggctgtgaatgaagacgactggagggacgccagcaca
tctccaacccttcttgacgggaatgcggagagggcagaagtgacagacctgtacccctgg
atggagtatcagttcaggatcatcgccaccaatgagcatggctccggagaggccagcatc
ccctccctcaagatcaaaacctgggattcttctccagtgattgctcccactgatgtggca
ggttatggaggtagaaatggcgagattgtcatcacatggacacctgtgcagccatggtat
ttctacggcaaaaagtttggttacattgtggcattcaagccttacgatgcttacgactgg
tggtacgagaccatttcagaccccgagacaaggcgttacgttcacagggactcctacttc
attccaactgacgaagacttccaggtccgagagtttcaggtgaagatcaagtcgtttaat
gtgaaaggagacggcccgtacagccccacccaggacatctactacccaagggatgtacct
acagagtcaccgacagacgtctatgccagaccagtgtcctccaccgaagctctggtctgg
tggttgccagtggtcgacactggtacaggcctgcagcagtacattgagggataccaggtc
aaatactggagaaagtacgatgatccggagccgggagcacaccgtatatttgttccagcc
acagtcaatcagaccaggttggagaacatgctgccagatgctcactacctcattgaggtt
cgagccttcaatggagccggcctcggaccccctggtgaacactgtgagatgttcacaaag
agaccaccaccaccagaccctcccaggatgtggcgctatattacctggactggacagtgg
ttgtatgtgtggtgggatcatatccagtatgactggtttggcaatatttccttcccactg
tattacaaggtcatgttcagaaagacaggctacatctacgggaaagtctacatcactggc
tggcacttcatggacttccccatgcctcaggttggagactatgagctgatggtacgtggc
cgttatgaaggtggagatggcccaatcaggaagattaggattcagggtaaagcatctatg
atcacgcccactctaagcctagtgtctttggtgctgctggcgctgtgcattgtgggattg
gaaatttaa
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