Siniperca chuatsi (mandarin fish): 122871163
Help
Entry
122871163 CDS
T08948
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122871163 (caprin2)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122871163 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
122871163
NCBI-ProteinID:
XP_044041841
LinkDB
All DBs
Position
LG23:20476722..20494511
Genome browser
AA seq
1003 aa
AA seq
DB search
MWSGACVCGRRPGRVYKAMSWRRPGLCVCERNIAVGKGSLRFGASGCPAAVLRGFNVHES
KTRESPPNRQANVELNMVQLSPSPTLDISPPPERSEEGEERQEDPVTAGSPRGGSPGCLS
TLQLEASTAYHGYETYIEDGLICLKHKVRNLEKKKLKLEDYKKRLNRGEALNKDQMAAVE
KYEEVLHNLAFARELHKTLDGLTQNLLSAQKKAVKKEQVAKAEAERRRLSTVLQVQHLLH
RLQQEHIRRDLLAGHNQAPHIPAQQLHSLSQLAALLGVKRDNKLSLEEQMEQAALAYLDL
LEGKDKPVAGSTFQLLKEELTRLLNCKYFSCLPPPPSKSPEVLLSSTSHSTTSKSKPNDV
SKKEFFNSLYLTDMKSPPTQNWKEDFQALSEQEPPDCWDMELSDGPASPQGAVHKPWRGA
ATFIPKVPVTKKQSADCKQRKDRRAKGEQHGKSAVHLEMPMEVFNSPGALPKDPILRKQH
LEDLMTKIHSSFSFMQDSLLDGESSPANGHPRLKRRPSGSPSPLGNLEQVNKLSHTDLGS
PVDILPKAMHSTPLPTRLMERKASLTNGDQCLESCDLELSSKDLPHEPLQLAEKKKFPSP
PLYRRESTISVSLEKSRPRTPVSESGKQSPCTGVTSCTSTPPQGQTFSTPPTRRTLTSAQ
FQNIQSIFKVNASLPQNGELNYKQDSAVFTEPRYSTASTQTPPEFAPSEDEPQPVCQSDY
TMGNGGQIFLSPGQSGGSVGRPGQSYYTRGSARGMARGGKGLAQNFRSSGWHRGASYIPQ
TNFRDFGPLLYAARDSGYQHNYRRGGGRHNSSAAWSDSSQVSSPDREGAFTLVDSGHGDS
LSVSTMEVPLTPHGHHHTALLPMQLYSLSQPLRVAFTASRTANFAPGNLDQPIVFDQLHS
NLGEMYDTHIGRFTCPVNGTYVFIFHILKLAINVPLYINLMRNEEVMVSAYANDGAPDHE
TASNHAILPLFQGDQVWLRLHRGAIYGSTWKYSTFSGFLLYQD
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgggtgcgtgtgtgtgtggccgccggcccggcagggtatataaagctatgagc
tggcgtcggcccggcctctgcgtctgcgagcggaacatcgcggttggaaaggggtcgctc
aggttcggggcttccggatgtcctgcggctgtcctgagaggatttaacgtgcacgagtca
aagacacgagagtccccacccaaccgtcaggccaatgtggagctcaacatggtgcagctg
tctccttcccctaccctggacatcagccctccacctgaacgctccgaggagggggaggaa
agacaggaggacccggtgacggctggtagccccagagggggctcgcctggttgtctgagc
accctgcagctcgaggcctctaccgcctaccacggctacgaaacctacatagaagatggt
ctcatctgcctcaaacacaaagtccgcaacttggagaaaaagaagctgaaactcgaagac
tacaagaagaggctgaaccggggcgaggcactaaacaaggatcagatggcggctgtggaa
aagtatgaggaggtgttgcataacctggcattcgcacgggagctgcacaaaaccctggat
ggcttgactcagaatttgctgagcgcccagaagaaggcagtgaagaaggagcaggtggcc
aaggcggaggcagagaggaggcgtctgagcactgtgctccaggtccagcacctcctccac
aggctgcagcaggagcacatcaggagagacctgctggctggacacaaccaggcgccccac
atccccgcccagcagctgcatagcctgagtcagctcgccgccctgctgggagtcaagagg
gataacaagctgagtttagaggagcagatggagcaagcggctctggcctacctggacctg
ctggagggcaaagacaagcctgtggctggatccacatttcagctgttgaaagaggagctc
accaggctgttgaactgcaagtacttcagttgtcttccacctccacccagcaagtctcca
gaggtgttgctgtcctcaaccagccacagcaccacgtcaaagtcaaaaccaaatgacgtt
tcaaagaaggagtttttcaacagcctctacctgactgacatgaagagtcctcccactcag
aactggaaggaggacttccaggccttgagcgagcaggagcctcctgactgctgggatatg
gagctctcagatggacccgcttcaccccaaggtgcagtccacaaaccatggagaggagct
gccactttcatccccaaagtcccagtcaccaagaaacaatctgctgactgcaaacagaga
aaagacaggcgagccaaaggagagcaacatggcaagtcggcagttcacctggaaatgcct
atggaggttttcaactctccaggtgccttacccaaagaccccatcctgaggaagcagcac
ctagaggacctcatgacaaagatccacagctccttcagtttcatgcaggactctcttctg
gatggtgagagctcccccgctaatggccaccccagactgaagagacggccgtctggatct
ccctctcctctgggtaacctggaacaagtcaacaagctctctcacacagacctcggaagc
ccagttgatatcctgcccaaagcaatgcattccaccccactgcctaccaggcttatggag
cgcaaagccagtctaacaaatggggatcagtgcctggagagctgtgacctggagctttcc
tcaaaggacctacctcatgagccactgcagttggctgaaaaaaagaagtttccttcaccg
ccgctgtaccgcagggagtctaccatctctgtcagtctggagaagagccgtcctcgtaca
ccggtatctgagtcagggaagcagtccccctgtactggggtgacatcttgcacctccacc
ccccctcagggacagacgttctctacaccccccactaggcgaactctgacgtctgcacag
tttcagaacatccagtcaatcttcaaggtgaatgcctctttacctcagaatggggaactg
aactacaaacaggattctgcggttttcaccgagcccaggtacagcactgccagtacccaa
acaccacctgagtttgctccctcagaagacgaaccacagccggtgtgccagtcagactac
acgatgggtaatggtggacagatcttcctgtcccctggccagtcgggcggaagcgtcggt
cgacccggccagtcatactacaccagaggatctgcgagaggtatggcacgtggcggcaag
ggactggcacaaaactttcgctcttctggttggcatcgaggagcatcctacatcccccag
actaatttcagggactttggccctctcctatatgctgctagagactctggataccagcac
aactacagacgtggaggagggaggcataactcaagtgcagcctggagtgactcttcccag
gtgagcagcccagaccgggagggagcctttacactcgtggactctggtcatggggattct
ctgtcggtctccaccatggaggtccctctgactccacacggccaccatcacaccgccctg
cttcccatgcaactctactccctctcccagccgctgcgagtggccttcaccgcctctcgc
accgccaacttcgccccgggcaacctggaccagcccattgtgttcgaccagctgcacagc
aacctgggggagatgtacgacacgcacatcggccgcttcacctgccctgtcaatggaacc
tacgtcttcatcttccacatcctgaagctcgccatcaacgtgccgctctacattaacctc
atgcgcaacgaggaggtgatggtgtcggcgtacgccaacgatggagcaccagatcatgag
acggccagcaaccacgccatcctacccctcttccaaggagatcaggtgtggctccggttg
catcgcggtgccatctatggcagcacctggaagtacagcaccttctctggcttcctgctg
taccaggattga
DBGET
integrated database retrieval system