Siniperca chuatsi (mandarin fish): 122871221
Help
Entry
122871221 CDS
T08948
Symbol
nup50
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122871221 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122871221 (nup50)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122871221 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
122871221
NCBI-ProteinID:
XP_044041981
LinkDB
All DBs
Position
LG23:complement(1359403..1371073)
Genome browser
AA seq
481 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEGEEAGTFSVASEDVLKNRAIKKAKRRNTGEGESGGTFKGF
KGFSLATSPASGASTPTAFSGFGNGGGFKGLSSLTNGNSITPSFGGFSSPAASSTAAPGL
TFNGPTSAKPTADITAKQTNGSAPSPTQSSSSCSSSTVSNKEYSRQLTALNCSVRDWITK
HVNDNPLCDLNPIFRDYERHLASIERQYGAGSADGGSEEKKQGGTLPTTATPPPPPPSSS
SSSSSRSSSAAPAPAAALFSFGKNKTDDSARDKSAAAAAPINAGVTFNFGQKVDGSVLGS
LGSKTTPPSFSFSSSSASSSQTSLFGAPGSAAPLSFSGKTSVDAKPAAENGDEESEEPPK
PEVKEVKEDDAFYSKKCKLFYKKDSEFKEKGVGTLHLKKIEEGKTQMIIRADTNLGNILL
NIIVQASMPCSRVGKNNVMVVCVPNPPVDEKNASSPVPLLIRVKTAEDADELHKTLEEKK
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgctgataaagagctaacggacaggaactgggatcaggaggaggag
ggagaggaggccgggacgttttcagttgcaagtgaagatgtgttgaagaatcgggcgatt
aagaaggccaaacgcagaaatactggagagggtgagagtggaggaacctttaaagggttc
aaagggttttctttggccacgtcaccagcgagtggagcctcgactccaacagccttttct
ggttttgggaacggtggaggttttaagggcctcagcagtctgaccaacggaaacagcatc
actccatcgttcggaggtttctcatctcctgctgcatcctccactgctgcacctggtcta
acattcaacggccccacctccgccaagcccaccgctgacatcaccgccaagcagaccaat
ggctccgctccgagcccgactcaaagctccagctcctgcagcagcagcactgtcagcaac
aaggagtacagccggcagctcaccgctctcaactgctcagtgcgggactggatcaccaag
cacgtgaacgacaaccctctgtgcgatctcaaccccatcttcagggattatgagcggcat
ctggccagcatcgagcggcagtacggagccgggtctgctgacggaggctccgaggagaag
aagcagggagggacgctgccaaccacggccacccctcctcctcctcctccttcctcctca
tcttcctcctccagcagaagcagctcggcggctccagctccagccgccgctttgttctcc
tttggcaaaaataagacagacgactcggcccgggacaaaagcgccgccgccgccgctccg
atcaacgccggcgtcacgtttaacttcggtcagaaggtggacggctcggttctgggctcc
ttagggtccaaaacgaccccccccagcttctccttctcctcctccagcgcctcctccagc
cagacctccctgttcggagctcctggatctgctgcaccgctgtccttcagcgggaagaca
tccgtggacgctaagcctgcagctgagaacggcgatgaagagtcggaggagccgcccaaa
cctgaggtcaaagaggtgaaggaggacgacgccttctactcaaagaagtgtaaactgttc
tacaagaaggactcggagttcaaagagaaaggagtgggaactctgcacctcaaaaagata
gaggagggaaaaactcagatgatcattcgcgccgacaccaatctgggaaacatcctgctg
aacatcatcgtgcaggcgtccatgccgtgctctcgggtcgggaagaacaacgtgatggtg
gtgtgcgtccccaacccgcccgtcgacgagaagaacgccagcagccccgtccccctcctc
atccgggtcaagaccgccgaggacgccgacgagctccacaagaccctggaggagaagaaa
ggctga
DBGET
integrated database retrieval system
