Siniperca chuatsi (mandarin fish): 122871228
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Entry
122871228 CDS
T08948
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122871228 (mkrn1)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122871228 (mkrn1)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122871228 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_9
zf-ANAPC11
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
122871228
NCBI-ProteinID:
XP_044042006
LinkDB
All DBs
Position
LG23:22315285..22348803
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AA seq
431 aa
AA seq
DB search
MAEAAVASTAASAVTGGWTKHVTCRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKG
NCVFGDRCRFEHCKPAKNEELPTPQTLPLPSVSLAGPSDPEPSGPTPGPGAQDWVNAAEF
VPGQPYCGRAEPVKVESSIPLIEEFDSDAALDNKELRKQLCPYAAVGECRYGINCAYLHG
DVCDMCGLQVLHPTDTTQRSDHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKAN
PSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKDD
KQKLIQKYKDGMGSKPCRYFDEGRGTCPFGSNCFYRHAFPDGRLEEVQPQRRQAGSNSRN
RNSRRTPLWDIFDERESTDSFDNEDEEMVTFELSEMLLMLLAAGTDDEVTDSEDEWDLFH
EELDDFYEIYL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagtagcgtctacggcggcttcagcagtaacaggaggttggaccaaa
cacgtaacctgcagatatttcatgcatggtctttgcaaagaaggagacaactgtcgatat
tctcatgatctgaccaacagcaaacctgcagccatgatttgcaagttctttcagaaggga
aactgtgtgttcggggatcgttgcaggtttgaacactgtaaaccggcaaagaacgaggag
ctgccaaccccccagacgctgccactgccctccgtctcgctggctggcccatcagaccca
gagcccagtgggccaacacctggcccaggggcacaagactgggtcaacgctgctgagttt
gttccaggacagccgtactgtggacgggctgagccagtgaaggtggagagctccatccct
ctcattgaggagtttgacagtgacgcagcactggataacaaagagttgaggaagcagctc
tgtccgtacgctgctgttggagagtgccgctacggaatcaactgtgcctatctccacggc
gacgtgtgtgacatgtgcggcctccaggtgctacaccccactgacaccacccagcgctcc
gatcacactaaggcatgcatcgaggcccatgagaaagacatggagatttcatttgccatc
caacgcagcaaggacatgatgtgtggtgtgtgtatggaagtggtgtttgagaaggccaac
ccaagtgagcgccgttttggcatcctctccaactgcagccactgctactgtctaaagtgc
attcgcaagtggaggagtgccaaacagtttgagagcaaaatcatcaagtcttgcccagag
tgtcgaatcacatccaactttgtcatcccaagcgaatactgggtggaagataaggatgac
aagcagaaactcatccaaaaatacaaggacggcatggggagtaaaccgtgtcgttacttt
gacgagggtcgtggaacgtgtccttttggctcaaattgcttctacaggcacgcctttcct
gatggacggctggaggaagttcaaccccagcgaagacaggctggatccaacagcaggaac
cggaactcgaggcgaacaccactatgggacatctttgatgagcgggaaagcactgactcc
tttgacaacgaggacgaggagatggtgacgtttgagctgagcgagatgctcctcatgctg
ctcgctgcaggaactgacgacgaagtgacagattcagaggatgagtgggacttgtttcac
gaggagctggacgatttctatgagatttacctatag
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