Siniperca chuatsi (mandarin fish): 122871371
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Entry
122871371 CDS
T08948
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04137
Mitophagy - animal
schu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122871371 (optn)
04137 Mitophagy - animal
122871371 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122871371 (optn)
Membrane trafficking [BR:
schu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122871371 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122871371 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122871371 (optn)
Xenophagy
Cargo receptors
122871371 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
122871371
NCBI-ProteinID:
XP_044042346
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All DBs
Position
LG23:complement(17148770..17155412)
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AA seq
543 aa
AA seq
DB search
MASGGPMMNGDIARSPSQPGTLEETLQQMNNLIQENRDLKEALRQTNLTMKERFEGLSVW
REKQREERDFLESRLEEARDRMAALTLQNQELSRRLEVEGRTGGALGDLLASHQSVEVDA
LRAQVARLQAEKNDLVAMNSELQLKADQDSHDDSFIEIIRVSDGGVDGVDGVGGVCGSER
SRRPELSMTASRLDSEEVTVSQLLQSLRNETQRAERLQAELQSSAARIRELEERKSNVED
STQTTEAEPTETKEDSGKEEKAASEVENLKSQMMTLFKELQQAQSKLDEAEGMKKNLQDR
CREVEQDVATLKAQLVEKQAVQAENDRLKLQLDSMQAQNQMEQRKAGEDRNNLAQLKDAY
TKLFEDYNELKEEKKKRESQLVQKEVVDQLQEQLTAAEEALAAKQSKIDHMKQEIFQKEK
ELETISVFQAQAEVYSSDFYAERAAREKLHEERERLAAQLEYVKKQNTHLQEEMDSLGRR
SLNEMQRRHVSMGGNQLGAGPTMVGRGPDWQHQGNIPEHACPKCNEILPDLDSLQIHIMD
CIN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggaggccccatgatgaacggcgacatcgctcgctctcccagtcagcccggc
acgctggaggaaaccctgcagcagatgaacaacctcatccaggagaaccgagacctaaaa
gaggccctgcgtcagaccaacctgacgatgaaggagcgtttcgaagggctgtctgtgtgg
cgggagaagcagcgggaggagcgggacttcctggagagcaggctggaggaggctcgggac
cgcatggcggcactgaccctccagaaccaggagctgagcaggaggctggaggtggagggg
aggacagggggagccctgggagacttgctggcatcccatcagagtgtagaagtggatgcc
ctgcgtgcccaggttgctcgcctgcaggcggagaagaacgacctggtggccatgaactct
gagctgcagctgaaggcggaccaggactcgcacgacgactccttcattgagatcatcagg
gtctcggacggaggcgtggacggcgtggacggcgtgggcggcgtgtgtggttcggagcgc
agcagacgtccagaactgagcatgacggcgtcccggctggacagcgaggaggtgaccgtc
agccagctcctccagtcactgaggaacgaaacacagcgggccgagcggctgcaggccgag
ctgcagtcctctgctgccagaattagagagctggaggagaggaagagtaatgtagaggat
tcaacacagaccaccgaagcagagcctacagagaccaaggaggattctgggaaagaggaa
aaggcagcatctgaggtggagaatctcaagtctcagatgatgacgctgttcaaagagctg
cagcaggcccagagcaagctggatgaagcagaaggcatgaagaagaacctgcaggacaga
tgtcgggaagtggagcaggacgtggccactctgaaggcccagctggtggagaaacaggct
gttcaggcggagaacgaccggctgaagctgcagctggacagcatgcaggcccagaaccag
atggagcagaggaaggctggggaggataggaacaatctggcccagctgaaggatgcctac
accaagctatttgaagactacaatgaactcaaagaggagaagaagaagagagagtctcag
ctggtgcagaaggaggtggtggaccagctgcaggaacagctgactgccgccgaagaggcc
ctggctgctaaacagagcaagattgatcacatgaagcaggagatcttccagaaggagaag
gagctggagaccatatctgtcttccaggctcaggcggaggtctactcctcagacttctac
gcagagcgagcagcgagggagaagctccatgaagagagggagcgtctggctgctcagctg
gagtacgtaaagaagcagaacacccatctgcaggaggagatggactcactaggccggcgg
tcgctgaacgagatgcagaggagacatgtgtcaatgggaggaaatcaactcggagctggc
cctacaatggttggaagaggtcctgactggcagcatcaggggaatattcccgaacatgcc
tgtcccaagtgcaatgagatcctgccggacctggactccctgcaaatccacatcatggac
tgcatcaactag
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